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The map label for this gene is selU [H]

Identifier: 123968468

GI number: 123968468

Start: 804768

End: 805808

Strand: Reverse

Name: selU [H]

Synonym: A9601_09351

Alternate gene names: 123968468

Gene position: 805808-804768 (Counterclockwise)

Preceding gene: 123968471

Following gene: 123968467

Centisome position: 48.26

GC content: 26.99

Gene sequence:

>1041_bases
ATGTATTTCAAAAGAAAAGAACTAGTGAAATTTAGATGTTTTAAAGGACCACTTATAGATGTTAGGAGCCCGAGTGAATA
TTATAAAGGACACATGCCTAATTCTATTAATATTCCAATATTTGATGATGATGAGAGATCTATAATTGGTACATTTTACA
AAAAAGAAGGTAGAAAAAAAGCAGTCATAGAGGGTTTAAAATTTTTTGAAAAAAAAATGGAATTACTTCTTGATAATTTA
TTCAAGAGTATTGAGTCTCATAAAACTATTCCTAAAAAAAATAATGAATTATTTATCAGGATATATTGCTCTAGAGGAGG
AATGCGTTCACAAAGTATTGGATGGTTATTAGATAAATTTAAATTAAATATAGTTACACTTAATGGCGGATACAAAATAT
ATAGAAGATGGGTATTAGATAGTTTTTCAAATAAGTTGAATTTAGTAGTTATTGGCGGGAAAACAGGAACAGGGAAGACA
AGATTATTATCATTACTTGATAAATATAAATATCAAACTATTGATCTTGAAGGATTTGCTTGTCATAGAGGAAGTACATT
TGGAGGTTTAGGAATGATAAAACAACCTTCAAATGAACAATTTGAAAATATAATTGCAGAAAAATTAAATTCTTTTAAAT
TTTCTAATAATATTTTTGTAGAAGCTGAAAGTGCAAATATAGGTAAATGTAAAATTCCTCATGAATTCTTCAATCAGATG
AAAAACTCTAGGAGGATTGAAATTATAAGGAGCGAATCTAACAGGTTAGATGAGTTAATAGATACTTATAGTGTATTTAA
AAAAGATGAACTCCAAGAATCAGTACTAAGGATAAAAAAAAGACTTGGACCGCAAAGAACGAAAATAGCTCTTGAATCAA
TTCATAATGAGAAATGGGACATAGTTTGCAGATCAGTTTTAGATTATTACGATAAGTGTTATGAATATGAAAAGGTTGGC
AAAACTAATATAAAGACAATAGATTTAACTGATAAAAATTATGATGAAAGTATCCTAGAGTTAATAAATAATGTTTTATA
A

Upstream 100 bases:

>100_bases
CTACAAATTTTTTTATAAGATCTAATGTAACATTACTATAGTTATCCTGTTCTTTGTTATTCATTTTAAAAAATCAATCT
AAAAAAAATAAAAACTATCC

Downstream 100 bases:

>100_bases
AATAACTACAAACGAATATGAAAAATATTTCCTAAGATAAAAAATTATAAACCGAATATTATGACATCAAATAAAACTGC
AAAAATACAATTTTATGAGG

Product: tRNA 2-selenouridine synthase

Products: NA

Alternate protein names: Selenophosphate-dependent tRNA 2-selenouridine synthase [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MYFKRKELVKFRCFKGPLIDVRSPSEYYKGHMPNSINIPIFDDDERSIIGTFYKKEGRKKAVIEGLKFFEKKMELLLDNL
FKSIESHKTIPKKNNELFIRIYCSRGGMRSQSIGWLLDKFKLNIVTLNGGYKIYRRWVLDSFSNKLNLVVIGGKTGTGKT
RLLSLLDKYKYQTIDLEGFACHRGSTFGGLGMIKQPSNEQFENIIAEKLNSFKFSNNIFVEAESANIGKCKIPHEFFNQM
KNSRRIEIIRSESNRLDELIDTYSVFKKDELQESVLRIKKRLGPQRTKIALESIHNEKWDIVCRSVLDYYDKCYEYEKVG
KTNIKTIDLTDKNYDESILELINNVL

Sequences:

>Translated_346_residues
MYFKRKELVKFRCFKGPLIDVRSPSEYYKGHMPNSINIPIFDDDERSIIGTFYKKEGRKKAVIEGLKFFEKKMELLLDNL
FKSIESHKTIPKKNNELFIRIYCSRGGMRSQSIGWLLDKFKLNIVTLNGGYKIYRRWVLDSFSNKLNLVVIGGKTGTGKT
RLLSLLDKYKYQTIDLEGFACHRGSTFGGLGMIKQPSNEQFENIIAEKLNSFKFSNNIFVEAESANIGKCKIPHEFFNQM
KNSRRIEIIRSESNRLDELIDTYSVFKKDELQESVLRIKKRLGPQRTKIALESIHNEKWDIVCRSVLDYYDKCYEYEKVG
KTNIKTIDLTDKNYDESILELINNVL
>Mature_346_residues
MYFKRKELVKFRCFKGPLIDVRSPSEYYKGHMPNSINIPIFDDDERSIIGTFYKKEGRKKAVIEGLKFFEKKMELLLDNL
FKSIESHKTIPKKNNELFIRIYCSRGGMRSQSIGWLLDKFKLNIVTLNGGYKIYRRWVLDSFSNKLNLVVIGGKTGTGKT
RLLSLLDKYKYQTIDLEGFACHRGSTFGGLGMIKQPSNEQFENIIAEKLNSFKFSNNIFVEAESANIGKCKIPHEFFNQM
KNSRRIEIIRSESNRLDELIDTYSVFKKDELQESVLRIKKRLGPQRTKIALESIHNEKWDIVCRSVLDYYDKCYEYEKVG
KTNIKTIDLTDKNYDESILELINNVL

Specific function: Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA [H]

COG id: COG2603

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1786712, Length=233, Percent_Identity=31.7596566523605, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR017582 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 40437; Mature: 40437

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFKRKELVKFRCFKGPLIDVRSPSEYYKGHMPNSINIPIFDDDERSIIGTFYKKEGRKK
CCCCHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHH
AVIEGLKFFEKKMELLLDNLFKSIESHKTIPKKNNELFIRIYCSRGGMRSQSIGWLLDKF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHEEEE
KLNIVTLNGGYKIYRRWVLDSFSNKLNLVVIGGKTGTGKTRLLSLLDKYKYQTIDLEGFA
EEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEECCCCEE
CHRGSTFGGLGMIKQPSNEQFENIIAEKLNSFKFSNNIFVEAESANIGKCKIPHEFFNQM
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEECCEEEEEECCCCCCEEECCHHHHHHH
KNSRRIEIIRSESNRLDELIDTYSVFKKDELQESVLRIKKRLGPQRTKIALESIHNEKWD
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
IVCRSVLDYYDKCYEYEKVGKTNIKTIDLTDKNYDESILELINNVL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MYFKRKELVKFRCFKGPLIDVRSPSEYYKGHMPNSINIPIFDDDERSIIGTFYKKEGRKK
CCCCHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHH
AVIEGLKFFEKKMELLLDNLFKSIESHKTIPKKNNELFIRIYCSRGGMRSQSIGWLLDKF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHEEEE
KLNIVTLNGGYKIYRRWVLDSFSNKLNLVVIGGKTGTGKTRLLSLLDKYKYQTIDLEGFA
EEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEECCCCEE
CHRGSTFGGLGMIKQPSNEQFENIIAEKLNSFKFSNNIFVEAESANIGKCKIPHEFFNQM
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEECCEEEEEECCCCCCEEECCHHHHHHH
KNSRRIEIIRSESNRLDELIDTYSVFKKDELQESVLRIKKRLGPQRTKIALESIHNEKWD
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH
IVCRSVLDYYDKCYEYEKVGKTNIKTIDLTDKNYDESILELINNVL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA