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The map label for this gene is ureD [H]

Identifier: 123968425

GI number: 123968425

Start: 766831

End: 767733

Strand: Direct

Name: ureD [H]

Synonym: A9601_08921

Alternate gene names: 123968425

Gene position: 766831-767733 (Clockwise)

Preceding gene: 123968416

Following gene: 123968426

Centisome position: 45.92

GC content: 29.9

Gene sequence:

>903_bases
ATGATTAAAACTTCATGGGAAGGTAATTGTTTCTTAAATTTTTTCAATAATAAAGTAAGTTTAGGAAATGTTGATAAAAC
AATCTTTAAATCTAAATCAACTTCTCCTTATAAGCTATTAAAGTCTACTCATGATCAAGAGGGCAGATGCATTTTGCCAG
TTCTACATACTGCAGGAGGATTGGTAGGAGGTGATTTACTCGTTTTTGAGGTTAATCTTGAAAAAAACTCTAAGGTTTTG
TTAACGACTTCTTCAGCTCAGAAAGTATATGGATCAGTTGGAATATCTAAAATTAATCCAAAAGGAAGTTTTTCAAAGCA
AAAGAATCTCATAAACATTCTTGACAATTCTCATTTAGAGTACCTTCCCCAAGAAACAATCATCTTTGCAAATGGTTTAT
ATGAGCAAATTTTTAAAGTATCTATTTCAGAAACTTCAAGTTTTTTATTTACTGATTTAATAAGACTTGGAAGATCTTCT
TCCGGAGAATCTATTGAGAGTGGAGTTTTTAGGTCTAGATTAGAAATTATAAGAAATAATGATTTACTTGATGATTGGGA
ATATGTTGATCAAATTGAATTATCTAAGGCAAGCTTTGTAGCCAAGTCAGGCATGGATTATATGCCCGTTTTTGGATCCT
TAATTTGGATTTGCGAAAAGGATTTTTCAAAGTCAAAAATAAATAATCTTGTAAGAAAAATAAAAAAGATTTTCAATAAA
ACTAATAATAATTTATCTATTGGAATCCTTGAAAATGGAATCTCTGTACGATTCCTAGGGAGTTCTTCTCAAGATGCTAG
AAAATGTTTTTTTCGTATTTGGAAACAAATTAGGTCTGTAAGTGGATTTTGTGAGCCAAAATATCAAGGTGTATGGCCTT
TACAAGATTCTATGAATTATTAA

Upstream 100 bases:

>100_bases
TCGGTTTTTCCTTAATCCAATCAGTTACAACAATTTGTTTATTCATTCTCATAATCAAAATTTTTGGTTACTTTAATTTA
GTAATTAAAGAAAACAATTT

Downstream 100 bases:

>100_bases
TTATGTTCAGAAAGAACCTTTTTTAAGAATTTATAGATTAATTTTTTATTATGCATCTTTCACCTCAAGAAAAGGATAAA
TTATTGATTTTTTCTGCTGC

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MIKTSWEGNCFLNFFNNKVSLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGGLVGGDLLVFEVNLEKNSKVL
LTTSSAQKVYGSVGISKINPKGSFSKQKNLINILDNSHLEYLPQETIIFANGLYEQIFKVSISETSSFLFTDLIRLGRSS
SGESIESGVFRSRLEIIRNNDLLDDWEYVDQIELSKASFVAKSGMDYMPVFGSLIWICEKDFSKSKINNLVRKIKKIFNK
TNNNLSIGILENGISVRFLGSSSQDARKCFFRIWKQIRSVSGFCEPKYQGVWPLQDSMNY

Sequences:

>Translated_300_residues
MIKTSWEGNCFLNFFNNKVSLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGGLVGGDLLVFEVNLEKNSKVL
LTTSSAQKVYGSVGISKINPKGSFSKQKNLINILDNSHLEYLPQETIIFANGLYEQIFKVSISETSSFLFTDLIRLGRSS
SGESIESGVFRSRLEIIRNNDLLDDWEYVDQIELSKASFVAKSGMDYMPVFGSLIWICEKDFSKSKINNLVRKIKKIFNK
TNNNLSIGILENGISVRFLGSSSQDARKCFFRIWKQIRSVSGFCEPKYQGVWPLQDSMNY
>Mature_300_residues
MIKTSWEGNCFLNFFNNKVSLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGGLVGGDLLVFEVNLEKNSKVL
LTTSSAQKVYGSVGISKINPKGSFSKQKNLINILDNSHLEYLPQETIIFANGLYEQIFKVSISETSSFLFTDLIRLGRSS
SGESIESGVFRSRLEIIRNNDLLDDWEYVDQIELSKASFVAKSGMDYMPVFGSLIWICEKDFSKSKINNLVRKIKKIFNK
TNNNLSIGILENGISVRFLGSSSQDARKCFFRIWKQIRSVSGFCEPKYQGVWPLQDSMNY

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 33882; Mature: 33882

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTSWEGNCFLNFFNNKVSLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGG
CCCCCCCCCEEEEEECCEEECCCCHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEHHHCCC
LVGGDLLVFEVNLEKNSKVLLTTSSAQKVYGSVGISKINPKGSFSKQKNLINILDNSHLE
CCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCHH
YLPQETIIFANGLYEQIFKVSISETSSFLFTDLIRLGRSSSGESIESGVFRSRLEIIRNN
HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
DLLDDWEYVDQIELSKASFVAKSGMDYMPVFGSLIWICEKDFSKSKINNLVRKIKKIFNK
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
TNNNLSIGILENGISVRFLGSSSQDARKCFFRIWKQIRSVSGFCEPKYQGVWPLQDSMNY
CCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MIKTSWEGNCFLNFFNNKVSLGNVDKTIFKSKSTSPYKLLKSTHDQEGRCILPVLHTAGG
CCCCCCCCCEEEEEECCEEECCCCHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEHHHCCC
LVGGDLLVFEVNLEKNSKVLLTTSSAQKVYGSVGISKINPKGSFSKQKNLINILDNSHLE
CCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCHH
YLPQETIIFANGLYEQIFKVSISETSSFLFTDLIRLGRSSSGESIESGVFRSRLEIIRNN
HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
DLLDDWEYVDQIELSKASFVAKSGMDYMPVFGSLIWICEKDFSKSKINNLVRKIKKIFNK
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
TNNNLSIGILENGISVRFLGSSSQDARKCFFRIWKQIRSVSGFCEPKYQGVWPLQDSMNY
CCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA