| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968398
Identifier: 123968398
GI number: 123968398
Start: 748994
End: 749653
Strand: Reverse
Name: 123968398
Synonym: A9601_08651
Alternate gene names: NA
Gene position: 749653-748994 (Counterclockwise)
Preceding gene: 123968399
Following gene: 123968397
Centisome position: 44.89
GC content: 30.61
Gene sequence:
>660_bases ATGAAATTAGCAATTACTGGTGCATCGGGGAAAACAGGTTATAGAATTTGCGAAGAAGCAGTTAAGAAAGGATATAAGGT AAGGCAAATCATCAGAAAGAATTCAAAAGTTTCAGCAGGACTAGAGCGTTTAGAAACAATTAGGATTTCATTAGACAAAA AAGGAGAACTTGATGAAGCTTTAAAAGATATGGATGTTTTGATAATTGCGACTGGGGCGAGAGCATCATTAGATTTAACT GGTCCTGCGAAGGTTGATGCATTAGGTGTATACAGGCAATTAGAGAGTTGCAAAAGAGTTGGTATTAAAAGAGTTATTTT AGTTAGTTCCCTTTGTACTGGTAAATTATTTCACCCATTAAACTTATTTGGTTTAATTCTTATTTGGAAGAAATTAGGTG AAAACTTTCTACGCAATTCAAATTTTGAATGGACTATTATTAGACCTGGAGGATTAAAGGAAAATGAAGATATCAAATCA GAAAATATAAATTATTCTAAAGAGGATACTCAAATTAATGGATCAATCCCAAGAAGATTAGTTGCGCAATGTTGTATAGA TTCTTTAAAAAACAAAGAATCCATAAATAAATTAATAGAAGTTACAAGTTCGAACGATAATAAAAAAATATCTTTTAAAA AAGCTATGCAAATGATTTAA
Upstream 100 bases:
>100_bases AATGTTATTTATGTCGTACTCTTTATCCAAAAAGAAAAAAGAAATTTATATGTAAAAAGCCTTAAGAAATTTATATAATA TTTAAATTAGTTTTTTAATC
Downstream 100 bases:
>100_bases AAGATGTAAATATATAAATTAAAACTATGAAAATAAATCCCAAAATTGACGCATTACAATTAATGCTTACTGATTTAAGA ACTAGAAATGAGCCAATAAG
Product: putative NADH-flavin reductase
Products: NA
Alternate protein names: NADH-Flavin Reductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEALKDMDVLIIATGARASLDLT GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKS ENINYSKEDTQINGSIPRRLVAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
Sequences:
>Translated_219_residues MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEALKDMDVLIIATGARASLDLT GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKS ENINYSKEDTQINGSIPRRLVAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI >Mature_219_residues MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEALKDMDVLIIATGARASLDLT GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKS ENINYSKEDTQINGSIPRRLVAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323737, Length=221, Percent_Identity=27.1493212669683, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24485; Mature: 24485
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEA CEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCHHHH LKDMDVLIIATGARASLDLTGPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPL HHCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH NLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKSENINYSKEDTQINGSIPRRL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH VAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI HHHHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHCC >Mature Secondary Structure MKLAITGASGKTGYRICEEAVKKGYKVRQIIRKNSKVSAGLERLETIRISLDKKGELDEA CEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCHHHH LKDMDVLIIATGARASLDLTGPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPL HHCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH NLFGLILIWKKLGENFLRNSNFEWTIIRPGGLKENEDIKSENINYSKEDTQINGSIPRRL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH VAQCCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI HHHHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA