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The map label for this gene is accD [H]

Identifier: 123968381

GI number: 123968381

Start: 734425

End: 735306

Strand: Reverse

Name: accD [H]

Synonym: A9601_08481

Alternate gene names: 123968381

Gene position: 735306-734425 (Counterclockwise)

Preceding gene: 123968382

Following gene: 123968380

Centisome position: 44.03

GC content: 35.6

Gene sequence:

>882_bases
GTGTCATTAATCGACTGGTTTGCCGCAAGGCGTAAAGATCAATTTGTTGGGAAAGTTTCCCAAGATACTGACGAAGGAGA
TGGTTTGTGGGTTAAATGTTCAGAGTGTTCGCAAGTAGCCTACAGAAAAGACCTAATTTCAAATTTCAATGTTTGTAATA
ATTGTGGACACCACAATAGGATTAATAGCGATGAAAGGATAAATATAATTGCTGATAAAAATTCATTCAAAGAATTTGAT
AGTTTACTAAGTCCTACAGATCCTTTGGGTTTTAAAGATAGAAGAGCGTATGCTGATCGAATTAAAGAAAGTCAAGCAGG
TACAGGTTTAAGAGATGGAGTCGTAACAGGTATCTGTTCTGTGAATTCAATGCCTTTAGCATTAGCTGTTATGGATTTTA
GATTTATGGGAGGATCCATGGGTTCAGTAGTTGGTGAAAAAATTACAAGGATAATTGAGAGAGCAACTTTGGAAAATTTT
CCAATTCTTATTGTTTGCGCATCAGGAGGAGCAAGGATGCAAGAAGGCATGTTAAGTCTCATGCAAATGGCAAAAATATC
TGGAGCACTAAAAAAACATAAAGAGAAAAATCTCTTATATATGCCCTTGTTAACTCATCCAACTACTGGAGGGGTAACAG
CCAGCTTTGCGATGTTAGGTGATTTAATTTTGGCGGAACCTAAAGCACTTATTGGATTTGCTGGAAGAAGGGTTATAGAA
CAAACATTAAGAGAAAAATTACCCGATAATTTTCAAACAGCTGAATATCTGCTTGAGCATGGTTTTGTTGATGTAATAGT
GAAAAGGAAAGATCTCAAGGATACTCTGACTAAAATTTTAAAAATTCATGGTGTAAAAGAACTTGCAGAAGCAAATACAT
AA

Upstream 100 bases:

>100_bases
AACTTTGAGAAGTTTTTAATCTAGAGGATCTCAAATTTTTATATATCTTTCTTGATAAAAGTACCTTACTTAGATTTAAA
TAGAAAAAACAGGAAAAGTT

Downstream 100 bases:

>100_bases
AATGAGAAAAATTTCTAATTTATTTTATTTTTCTTTAAGCTTTCTACTCTTTATTTTAAACTTTGCCTCCTATTCTTATG
CGATAGGAAATGTTGATTGG

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCNNCGHHNRINSDERINIIADKNSFKEFD
SLLSPTDPLGFKDRRAYADRIKESQAGTGLRDGVVTGICSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATLENF
PILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIE
QTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKDTLTKILKIHGVKELAEANT

Sequences:

>Translated_293_residues
MSLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCNNCGHHNRINSDERINIIADKNSFKEFD
SLLSPTDPLGFKDRRAYADRIKESQAGTGLRDGVVTGICSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATLENF
PILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIE
QTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKDTLTKILKIHGVKELAEANT
>Mature_292_residues
SLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCNNCGHHNRINSDERINIIADKNSFKEFDS
LLSPTDPLGFKDRRAYADRIKESQAGTGLRDGVVTGICSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATLENFP
ILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIEQ
TLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKDTLTKILKIHGVKELAEANT

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=254, Percent_Identity=51.1811023622047, Blast_Score=273, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI25147362, Length=196, Percent_Identity=27.0408163265306, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25147359, Length=196, Percent_Identity=27.0408163265306, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 32443; Mature: 32312

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCNNCGHHNR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCC
INSDERINIIADKNSFKEFDSLLSPTDPLGFKDRRAYADRIKESQAGTGLRDGVVTGICS
CCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHC
VNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATLENFPILIVCASGGARMQEGMLSL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
MQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIE
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKDTLTKILKIHGVKELAEANT
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC
>Mature Secondary Structure 
SLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCNNCGHHNR
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCC
INSDERINIIADKNSFKEFDSLLSPTDPLGFKDRRAYADRIKESQAGTGLRDGVVTGICS
CCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHC
VNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATLENFPILIVCASGGARMQEGMLSL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
MQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIE
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKDTLTKILKIHGVKELAEANT
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA