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The map label for this gene is ydgJ [C]

Identifier: 123968379

GI number: 123968379

Start: 732931

End: 734028

Strand: Reverse

Name: ydgJ [C]

Synonym: A9601_08461

Alternate gene names: 123968379

Gene position: 734028-732931 (Counterclockwise)

Preceding gene: 123968380

Following gene: 123968378

Centisome position: 43.96

GC content: 31.69

Gene sequence:

>1098_bases
ATGAATACTAAAAATAAAAAATTAAAAATAGCAATCGCTGGACTAGGGTTTGGGAAAAAAGTTCATTTAGAGGCATTAAA
AGAGTCTGATCACTTAACTCCTGTAGCAATTTATCATTACGATAAAAAGCAAAAATCGATATTAGAAAAAGAAACGGGCT
TAGATTTTTTTCATAATTGGGAAGACTTAGTTAAATCTCCAAAAATTGATGGAATTATTATTGCCACTCCTCCTGAATCA
AGATTTAAGTTAGCAAAACAAGCTCTTGAGAATAATAAAAATCTGCTCCTAGAAAAACCCGTTTCAATATCCTCCTCAGA
AATTGAAGAGCTTCAGAGAATATCTTTGATTAATAATTTAAGCGTATGTGTTGATTTTGAATATAGAGCAGTACCTCTTT
TCCTTCAGACAAAAAAACTTATTGATGAAAATATCTTAGGAGATATATATTTAGTCAAATTAGATTGGTTAATGGGCAGT
AGATCCGACCCCAAAAGATTCTGGAATTGGTATTCATTGGAAGAAAAAGGTGGAGGAGTTATTGGTGCTTTAGGTACTCA
TGCATTCGATATGTTGAATTGGTTTTTTGGAGAAGCAATAAACGTATCTGGCAAGTTAGCAACATCAATAAAAAAAAGAC
CTTTACCTAATTCATCTGATTTAAATGCTGTTACGAGTGAGGATGTATGTTTAGCCAATATAGAAATAACAAACTACAGC
TCGAATCTTATTCCATGTCAGGTATCTTTATCATCAATTTCTAAAAATGGTAGAGGATTTTGTTTAGAAATATATGGAAG
CGAAGGTTCACTAATTCTTAAAAGCGAAAACCAAAAAGATTATGTACATGGTTTTAATTTGAAATATTCAAACAACGAAA
ATAAAATACAAAATCTAACTGCAGATTCAAGTTTTAATTTTGAAAAAACATGGACTGATGGGAGAATAGCTCCAGTTTTG
AGAATTCAAAATTTATGGGCTCAGAGTATAATTAACGGAACACCTGTAATCCCAGGCTTATGCGAGGGACTTGCTAGTCA
TAAAGTTTGCGAAGCCATAAGAGAATCTTCCAAAAGTGGATTAAGTATCAAAATTTAA

Upstream 100 bases:

>100_bases
GAATTCCTCAATTCAATTCAAAATGGCAAACTTCTAATAATGATGAACTTATAGATGTTGTTATTGAAAACAGCTGTTCA
GAGTTTATTAATAAATAAGA

Downstream 100 bases:

>100_bases
GGCTATACATTTATAAGTAGCAATTATCACCCCATAAAGTATTGAATTGATTTTATTTTTTTTTCATATTCTGGAAAAAT
CAATTGAACTGAATTATTAA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNTKNKKLKIAIAGLGFGKKVHLEALKESDHLTPVAIYHYDKKQKSILEKETGLDFFHNWEDLVKSPKIDGIIIATPPES
RFKLAKQALENNKNLLLEKPVSISSSEIEELQRISLINNLSVCVDFEYRAVPLFLQTKKLIDENILGDIYLVKLDWLMGS
RSDPKRFWNWYSLEEKGGGVIGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNAVTSEDVCLANIEITNYS
SNLIPCQVSLSSISKNGRGFCLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLTADSSFNFEKTWTDGRIAPVL
RIQNLWAQSIINGTPVIPGLCEGLASHKVCEAIRESSKSGLSIKI

Sequences:

>Translated_365_residues
MNTKNKKLKIAIAGLGFGKKVHLEALKESDHLTPVAIYHYDKKQKSILEKETGLDFFHNWEDLVKSPKIDGIIIATPPES
RFKLAKQALENNKNLLLEKPVSISSSEIEELQRISLINNLSVCVDFEYRAVPLFLQTKKLIDENILGDIYLVKLDWLMGS
RSDPKRFWNWYSLEEKGGGVIGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNAVTSEDVCLANIEITNYS
SNLIPCQVSLSSISKNGRGFCLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLTADSSFNFEKTWTDGRIAPVL
RIQNLWAQSIINGTPVIPGLCEGLASHKVCEAIRESSKSGLSIKI
>Mature_365_residues
MNTKNKKLKIAIAGLGFGKKVHLEALKESDHLTPVAIYHYDKKQKSILEKETGLDFFHNWEDLVKSPKIDGIIIATPPES
RFKLAKQALENNKNLLLEKPVSISSSEIEELQRISLINNLSVCVDFEYRAVPLFLQTKKLIDENILGDIYLVKLDWLMGS
RSDPKRFWNWYSLEEKGGGVIGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNAVTSEDVCLANIEITNYS
SNLIPCQVSLSSISKNGRGFCLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLTADSSFNFEKTWTDGRIAPVL
RIQNLWAQSIINGTPVIPGLCEGLASHKVCEAIRESSKSGLSIKI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=158, Percent_Identity=29.1139240506329, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1789848, Length=208, Percent_Identity=25.9615384615385, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40779; Mature: 40779

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKNKKLKIAIAGLGFGKKVHLEALKESDHLTPVAIYHYDKKQKSILEKETGLDFFHNW
CCCCCCEEEEEEEECCCCCEEHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHCCH
EDLVKSPKIDGIIIATPPESRFKLAKQALENNKNLLLEKPVSISSSEIEELQRISLINNL
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
SVCVDFEYRAVPLFLQTKKLIDENILGDIYLVKLDWLMGSRSDPKRFWNWYSLEEKGGGV
EEEEEECCEEEEEEEHHHHHHHHHCCCCEEEEEEEEHHCCCCCHHHHHCEEEEECCCCEE
IGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNAVTSEDVCLANIEITNYS
EEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCC
SNLIPCQVSLSSISKNGRGFCLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLT
CCEEEEEEEHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEEEECCCCCHHHEEE
ADSSFNFEKTWTDGRIAPVLRIQNLWAQSIINGTPVIPGLCEGLASHKVCEAIRESSKSG
CCCCCCCEEECCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
LSIKI
CEEEC
>Mature Secondary Structure
MNTKNKKLKIAIAGLGFGKKVHLEALKESDHLTPVAIYHYDKKQKSILEKETGLDFFHNW
CCCCCCEEEEEEEECCCCCEEHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHCCH
EDLVKSPKIDGIIIATPPESRFKLAKQALENNKNLLLEKPVSISSSEIEELQRISLINNL
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
SVCVDFEYRAVPLFLQTKKLIDENILGDIYLVKLDWLMGSRSDPKRFWNWYSLEEKGGGV
EEEEEECCEEEEEEEHHHHHHHHHCCCCEEEEEEEEHHCCCCCHHHHHCEEEEECCCCEE
IGALGTHAFDMLNWFFGEAINVSGKLATSIKKRPLPNSSDLNAVTSEDVCLANIEITNYS
EEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCC
SNLIPCQVSLSSISKNGRGFCLEIYGSEGSLILKSENQKDYVHGFNLKYSNNENKIQNLT
CCEEEEEEEHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEEEECCCCCHHHEEE
ADSSFNFEKTWTDGRIAPVLRIQNLWAQSIINGTPVIPGLCEGLASHKVCEAIRESSKSG
CCCCCCCEEECCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
LSIKI
CEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]