| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968378
Identifier: 123968378
GI number: 123968378
Start: 731760
End: 732827
Strand: Reverse
Name: 123968378
Synonym: A9601_08451
Alternate gene names: NA
Gene position: 732827-731760 (Counterclockwise)
Preceding gene: 123968379
Following gene: 123968377
Centisome position: 43.88
GC content: 38.01
Gene sequence:
>1068_bases ATGGCTTTAAATTATTACAAAAATGAGCTTAAAGAAAATGCTCAATTACTAGCTTCTAAAGGAAAAGGAATATTAGCGGT AGATGAATCCACTAAAACAGTAGGTAAAAGACTCGCTGGAATTGGCGTTGAGAATACTGAAGACAATAGGAAGGCATATA GAGGAATGCTTTTTACTACACAAGGTCTTGGCAAATATATAAGTGGAGCAATCCTCTTCGAAGAAACTCTTTATCAGAAT CACCAAGATGGCGAGTCAATGGTTAAGAAACTAAATGATTTAGGTATTATTCCAGGTATAAAGGTCGATAAAGGCCTAAA TCCACTTCCAGGAGGAGGAGATGTAGAAACTTTTTGCTCTGGCCTAGATGGGTTAGTTGAAAGAGCCGCAAAATATTATG AACAAGGTGCCAGATTTGCAAAGTGGAGAGCAGTTCTGCAAATTACAAATGATGGTTGTCCTTCAAAACTATCAATTCAA GAGAATGCTTGGGGATTAGCAAGGTATGCAAGATCAGTTCAAGAATCTGGGTTAGTACCAATTATTGAACCAGAAATCTT AATGGACGGCGACCATACTATTGAAAAAACTGCTGAAGTTCAAGAAGAGGTAATAAAGCAGGTTTATATTGCCTGTCAAG CAAATGGAGTATTTCTAGAAGGTACTCTATTAAAACCTTCTATGACTGTTAATGGAGCAGATTGTCCAACAAAGGCTGAT CCTATGAAGGTTGCTGAAATGACAATTAGAACTATGGAAAGATGCGTTCCTGCATCTGTTCCTGGAATAGTTTTCTTATC AGGAGGGTTAAGCGAAGAAGCTGCTTCAGTTTATCTAAATAATATGAACACTCTTTACAGGAAAGCTTTATGGAATGTTT CATTCTCCTATGGAAGAGCATTACAACATTCATGCTTAAAGGCCTGGAAAGGAAGCGATGTTGAAGGAGGTCAAAAAGCA TTAATAGCAAGAGCTCAAGCAAACTCTGAAGCTTCAAAAGGTGCCTATGTAGCAGGATCTCAACCTTCATCTGATGAGCA ATTGTTTGTGGCCGGCTACACTTATTAA
Upstream 100 bases:
>100_bases TATACATTTATAAGTAGCAATTATCACCCCATAAAGTATTGAATTGATTTTATTTTTTTTTCATATTCTGGAAAAATCAA TTGAACTGAATTATTAAAGA
Downstream 100 bases:
>100_bases CTAAAAACTCCTAAAAATGTACTCTGGGTCATAAAATAAGTTTCTTTAATTTAGTATTTTGTATATCTAATGACGTGACA TTTGATACCTCTTTATACTA
Product: fructose-1,6-bisphosphate aldolase class I
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEDNRKAYRGMLFTTQGLGKYISGAILFEETLYQN HQDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCSGLDGLVERAAKYYEQGARFAKWRAVLQITNDGCPSKLSIQ ENAWGLARYARSVQESGLVPIIEPEILMDGDHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGADCPTKAD PMKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRALQHSCLKAWKGSDVEGGQKA LIARAQANSEASKGAYVAGSQPSSDEQLFVAGYTY
Sequences:
>Translated_355_residues MALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEDNRKAYRGMLFTTQGLGKYISGAILFEETLYQN HQDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCSGLDGLVERAAKYYEQGARFAKWRAVLQITNDGCPSKLSIQ ENAWGLARYARSVQESGLVPIIEPEILMDGDHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGADCPTKAD PMKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRALQHSCLKAWKGSDVEGGQKA LIARAQANSEASKGAYVAGSQPSSDEQLFVAGYTY >Mature_354_residues ALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEDNRKAYRGMLFTTQGLGKYISGAILFEETLYQNH QDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCSGLDGLVERAAKYYEQGARFAKWRAVLQITNDGCPSKLSIQE NAWGLARYARSVQESGLVPIIEPEILMDGDHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGADCPTKADP MKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRALQHSCLKAWKGSDVEGGQKAL IARAQANSEASKGAYVAGSQPSSDEQLFVAGYTY
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI40354205, Length=354, Percent_Identity=50.5649717514124, Blast_Score=326, Evalue=2e-89, Organism=Homo sapiens, GI4885063, Length=354, Percent_Identity=47.7401129943503, Blast_Score=308, Evalue=4e-84, Organism=Homo sapiens, GI34577112, Length=354, Percent_Identity=47.4576271186441, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI34577110, Length=354, Percent_Identity=47.4576271186441, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI4557305, Length=354, Percent_Identity=47.4576271186441, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI193794814, Length=354, Percent_Identity=47.4576271186441, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI25150450, Length=358, Percent_Identity=47.2067039106145, Blast_Score=305, Evalue=3e-83, Organism=Caenorhabditis elegans, GI71983985, Length=352, Percent_Identity=47.7272727272727, Blast_Score=298, Evalue=2e-81, Organism=Caenorhabditis elegans, GI71983990, Length=233, Percent_Identity=49.7854077253219, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI45553577, Length=354, Percent_Identity=50.5649717514124, Blast_Score=317, Evalue=9e-87, Organism=Drosophila melanogaster, GI24650282, Length=352, Percent_Identity=50.2840909090909, Blast_Score=311, Evalue=3e-85, Organism=Drosophila melanogaster, GI24650280, Length=352, Percent_Identity=50.2840909090909, Blast_Score=311, Evalue=3e-85, Organism=Drosophila melanogaster, GI24650278, Length=352, Percent_Identity=50.2840909090909, Blast_Score=311, Evalue=3e-85, Organism=Drosophila melanogaster, GI221459619, Length=337, Percent_Identity=51.0385756676558, Blast_Score=306, Evalue=1e-83, Organism=Drosophila melanogaster, GI24650288, Length=337, Percent_Identity=51.0385756676558, Blast_Score=306, Evalue=1e-83, Organism=Drosophila melanogaster, GI24650304, Length=348, Percent_Identity=45.1149425287356, Blast_Score=273, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38500; Mature: 38369
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00158 ALDOLASE_CLASS_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEDNRKAYRGMLFTT CCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHEEEH QGLGKYISGAILFEETLYQNHQDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHH GLDGLVERAAKYYEQGARFAKWRAVLQITNDGCPSKLSIQENAWGLARYARSVQESGLVP HHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCE IIEPEILMDGDHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGADCPTKAD EECCCEEECCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCEEECCCCCCCCCC PMKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRA CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LQHSCLKAWKGSDVEGGQKALIARAQANSEASKGAYVAGSQPSSDEQLFVAGYTY HHHHHHHHHCCCCCCCCHHHHEEHHHCCCCCCCCEEEECCCCCCCCEEEEEEECC >Mature Secondary Structure ALNYYKNELKENAQLLASKGKGILAVDESTKTVGKRLAGIGVENTEDNRKAYRGMLFTT CCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHEEEH QGLGKYISGAILFEETLYQNHQDGESMVKKLNDLGIIPGIKVDKGLNPLPGGGDVETFCS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHH GLDGLVERAAKYYEQGARFAKWRAVLQITNDGCPSKLSIQENAWGLARYARSVQESGLVP HHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCCE IIEPEILMDGDHTIEKTAEVQEEVIKQVYIACQANGVFLEGTLLKPSMTVNGADCPTKAD EECCCEEECCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCEEECCCCCCCCCC PMKVAEMTIRTMERCVPASVPGIVFLSGGLSEEAASVYLNNMNTLYRKALWNVSFSYGRA CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LQHSCLKAWKGSDVEGGQKALIARAQANSEASKGAYVAGSQPSSDEQLFVAGYTY HHHHHHHHHCCCCCCCCHHHHEEHHHCCCCCCCCEEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]