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The map label for this gene is rpe [H]

Identifier: 123968361

GI number: 123968361

Start: 717057

End: 717812

Strand: Reverse

Name: rpe [H]

Synonym: A9601_08281

Alternate gene names: 123968361

Gene position: 717812-717057 (Counterclockwise)

Preceding gene: 123968369

Following gene: 123968355

Centisome position: 42.99

GC content: 37.57

Gene sequence:

>756_bases
ATGACTGAGTCAAATCAAGAAAATTTAACTGGTGCTAATAGACCAATTCAAATAATTCCTTCAGTTTTACCAGCAGATTG
GGCAAATATGGGGGCATGTGTGAAAGAGCTCGAGGAGGCTGGAGTAGATAGAATTCAATTTGATGTAATGGATGGAAATT
TCGTGCCAAATCTTACATTTGGTCCTGAAATGATTTCCGCATGCCGGAAATATTGCAATGTCCCTTTTGAAACTCAATTA
ATGGTGAGCCAATATAACTGTGAAACCATGCTTGAATCTTATGTAAAAGCCACAAAAGGGCCGAATGGTGAACCTGGAGT
AGTAATAGCTCATGCCGAAGCAAATATTCATTTGCATAGAGTTCTCGGAAGAATAAGAGATTTAGGAGGATCTCCTTCTG
TTGCATTAAACCCTCATACCCCTTTTGAAATGATTAAAAACATAATGGATATGGTTGATCATGTTTTGGTTATGACAGTT
AATCCAGGCTTTGGAGGACAAGCTTATATACCAACAATGCTTAATAAAATCAGAGAGATAAGAAACTTTATTATCGAAAA
AAACTTAGATGTCGACATTGAAGTTGATGGGGGGATAAAAGCAAATTGGACCATTTCACAATGTGCCGATGCTGGTGCCA
ATTGTTTTATTGCAGGTAGTGGAATGTTTGCTTACCCAACATTAAAAGAAGGATGTGATGACTTAAGAAAAGTTGCACAA
GAAGCGCAAAAGGGGAATGTTCTTTCAGAGCCTTAA

Upstream 100 bases:

>100_bases
TTTTTTTAACTCTTTACAGCTGTTACTTTATCAGGCCGTGACTTGAAATTAGGAATAAACAACTAAATATAGTATCTTTA
TTAAATATTTTAAAATTTAA

Downstream 100 bases:

>100_bases
TCAATAAGGGTTGGTGATTTCTTAATCACCCAAATATCCATCCATAACTATGTAACCCTATTCCTAAAAAATTAACTCCT
AAATAACAAACTAAAACAAC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTESNQENLTGANRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCNVPFETQL
MVSQYNCETMLESYVKATKGPNGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTV
NPGFGGQAYIPTMLNKIREIRNFIIEKNLDVDIEVDGGIKANWTISQCADAGANCFIAGSGMFAYPTLKEGCDDLRKVAQ
EAQKGNVLSEP

Sequences:

>Translated_251_residues
MTESNQENLTGANRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCNVPFETQL
MVSQYNCETMLESYVKATKGPNGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTV
NPGFGGQAYIPTMLNKIREIRNFIIEKNLDVDIEVDGGIKANWTISQCADAGANCFIAGSGMFAYPTLKEGCDDLRKVAQ
EAQKGNVLSEP
>Mature_250_residues
TESNQENLTGANRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCNVPFETQLM
VSQYNCETMLESYVKATKGPNGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTVN
PGFGGQAYIPTMLNKIREIRNFIIEKNLDVDIEVDGGIKANWTISQCADAGANCFIAGSGMFAYPTLKEGCDDLRKVAQE
AQKGNVLSEP

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=236, Percent_Identity=34.7457627118644, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI219879828, Length=234, Percent_Identity=32.9059829059829, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI24307923, Length=115, Percent_Identity=35.6521739130435, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1789788, Length=229, Percent_Identity=38.8646288209607, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1790523, Length=209, Percent_Identity=33.4928229665072, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1790754, Length=180, Percent_Identity=25.5555555555556, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17552948, Length=215, Percent_Identity=35.8139534883721, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6322341, Length=219, Percent_Identity=32.4200913242009, Blast_Score=106, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24586301, Length=235, Percent_Identity=36.5957446808511, Blast_Score=129, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 27473; Mature: 27342

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESNQENLTGANRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTF
CCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GPEMISACRKYCNVPFETQLMVSQYNCETMLESYVKATKGPNGEPGVVIAHAEANIHLHR
CHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
VLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREI
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH
RNFIIEKNLDVDIEVDGGIKANWTISQCADAGANCFIAGSGMFAYPTLKEGCDDLRKVAQ
HHHHHHCCCCEEEEECCCEEECEEHHHHHCCCCCEEEECCCCEECCCHHHHHHHHHHHHH
EAQKGNVLSEP
HHHCCCCCCCC
>Mature Secondary Structure 
TESNQENLTGANRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTF
CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
GPEMISACRKYCNVPFETQLMVSQYNCETMLESYVKATKGPNGEPGVVIAHAEANIHLHR
CHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
VLGRIRDLGGSPSVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREI
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH
RNFIIEKNLDVDIEVDGGIKANWTISQCADAGANCFIAGSGMFAYPTLKEGCDDLRKVAQ
HHHHHHCCCCEEEEECCCEEECEEHHHHHCCCCCEEEECCCCEECCCHHHHHHHHHHHHH
EAQKGNVLSEP
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]