| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is por [H]
Identifier: 123968225
GI number: 123968225
Start: 612903
End: 613904
Strand: Direct
Name: por [H]
Synonym: A9601_06901
Alternate gene names: 123968225
Gene position: 612903-613904 (Clockwise)
Preceding gene: 123968222
Following gene: 123968228
Centisome position: 36.7
GC content: 25.85
Gene sequence:
>1002_bases ATGATTAAATATAAAAGTATTTTAATTACTGGAGGTAATTCAGGAATAGGGTTTTTTGCCATTATTAATTTACTGAAGAC GAAAAATATTTTATATGTTGTAATAAAAAACGAATTTAGAAAGAATGAATTTCTCAAAAAAATTGAGAAATATTTTGATA AAAATTACCTTATTAAATTTCTAAATATTATTGAAAATTGTGATCTTTCAGATCTAGAGAATATTAACAAAATTAAAGAA TACTTTATTAGTAAAAAAATTTTTTTAGATACTGTTGTTTTAAATGCAGGATTACAATATACGGGTTCTTTTTACCCTAA AGTATCAAAACAAGGCATAGAACTAACTTTTGCGGTAAACCATCTTGCACATTTTTATTTGGTAAGTGTACTGAAAGATT TTATTAGAGATAAAGAAGAATCTAGAATCATTATTACATCATCAGATGTTCACGACCCCAAAAGTTCAGGTGGCAATATA GGAAAGAAAGCGGGACTTAATAACCTAGTTGATTTTAGAAAAAAAGTAACTGGGCAATTTTTAAATTTTAATGCTGATGA AGCTTATAAGAATAGTAAGTTATGTAATATTTTGTTTGCTAAAGAACTTGAAAAAAAATTAAAAATGTCCTCAAGTAAAA TTTCTGTAATAACTTGGGCTCCCGGTCTAGTAATACCAACTGATGATTCTGGTTTTTTTAGATATAGTAAACGCTTTAAT CTCTTTGGATATTTAATTTTTTCTAAAGTTGCAAAAAACATTTTAGGAATTTCTGAAAGTATAGAAAATGCTGGTAAGAT ACTTTCTGAAATTGTTGTTGATTCAAATTTAAATAATGTTGGTTACGTCCATTTAAGTAATAAACTTTTATCTTTTAAAA AACATAAATTAGTTGAAAGTAAGGTTAGTGATGAGGCAAATAATTCTGAGTTGGCTTCAAAACTCTGGATTTTAAGTGAA GAGATTTGTAGATCATTTGGCTTTGTTACTTTCAATATTTAA
Upstream 100 bases:
>100_bases TAGTGACTAAGTTTTCAGTGTTTTAACAATAATTTATAAGATTACAAAATAAAAAAAACTTTATTTATTTTTTTATCATA AAAAAAATATAAGAATTTAA
Downstream 100 bases:
>100_bases GGTTTGTGTTGGGAATGCAAACTCTATATTATTAACCGCAAATTCCTCAATAATTCTTAAATTTATAGATTGTTGAGCTT CCATTGCAGCGAGATAATTA
Product: putative light-dependent protochlorophyllide oxido-reductase
Products: NA
Alternate protein names: PCR; NADPH-protochlorophyllide oxidoreductase; LPOR; POR [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MIKYKSILITGGNSGIGFFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLIKFLNIIENCDLSDLENINKIKE YFISKKIFLDTVVLNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVSVLKDFIRDKEESRIIITSSDVHDPKSSGGNI GKKAGLNNLVDFRKKVTGQFLNFNADEAYKNSKLCNILFAKELEKKLKMSSSKISVITWAPGLVIPTDDSGFFRYSKRFN LFGYLIFSKVAKNILGISESIENAGKILSEIVVDSNLNNVGYVHLSNKLLSFKKHKLVESKVSDEANNSELASKLWILSE EICRSFGFVTFNI
Sequences:
>Translated_333_residues MIKYKSILITGGNSGIGFFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLIKFLNIIENCDLSDLENINKIKE YFISKKIFLDTVVLNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVSVLKDFIRDKEESRIIITSSDVHDPKSSGGNI GKKAGLNNLVDFRKKVTGQFLNFNADEAYKNSKLCNILFAKELEKKLKMSSSKISVITWAPGLVIPTDDSGFFRYSKRFN LFGYLIFSKVAKNILGISESIENAGKILSEIVVDSNLNNVGYVHLSNKLLSFKKHKLVESKVSDEANNSELASKLWILSE EICRSFGFVTFNI >Mature_333_residues MIKYKSILITGGNSGIGFFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLIKFLNIIENCDLSDLENINKIKE YFISKKIFLDTVVLNAGLQYTGSFYPKVSKQGIELTFAVNHLAHFYLVSVLKDFIRDKEESRIIITSSDVHDPKSSGGNI GKKAGLNNLVDFRKKVTGQFLNFNADEAYKNSKLCNILFAKELEKKLKMSSSKISVITWAPGLVIPTDDSGFFRYSKRFN LFGYLIFSKVAKNILGISESIENAGKILSEIVVDSNLNNVGYVHLSNKLLSFKKHKLVESKVSDEANNSELASKLWILSE EICRSFGFVTFNI
Specific function: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily [H]
Homologues:
Organism=Homo sapiens, GI7706523, Length=319, Percent_Identity=26.6457680250784, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI166795268, Length=318, Percent_Identity=25.4716981132075, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI10190746, Length=232, Percent_Identity=25.8620689655172, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI186928839, Length=322, Percent_Identity=27.9503105590062, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI225579078, Length=322, Percent_Identity=24.8447204968944, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17532791, Length=208, Percent_Identity=32.6923076923077, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17532805, Length=231, Percent_Identity=31.6017316017316, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17558006, Length=218, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193207620, Length=332, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI161076371, Length=220, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI20129347, Length=322, Percent_Identity=26.7080745341615, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI45553409, Length=230, Percent_Identity=27.8260869565217, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24647948, Length=230, Percent_Identity=27.8260869565217, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24647946, Length=230, Percent_Identity=27.8260869565217, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24586328, Length=321, Percent_Identity=25.8566978193146, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI22024069, Length=221, Percent_Identity=28.9592760180996, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI19921754, Length=222, Percent_Identity=29.2792792792793, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24647931, Length=237, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28573296, Length=320, Percent_Identity=26.25, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR005979 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.33 [H]
Molecular weight: Translated: 37831; Mature: 37831
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKYKSILITGGNSGIGFFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLIKF CCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHH LNIIENCDLSDLENINKIKEYFISKKIFLDTVVLNAGLQYTGSFYPKVSKQGIELTFAVN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHH HLAHFYLVSVLKDFIRDKEESRIIITSSDVHDPKSSGGNIGKKAGLNNLVDFRKKVTGQF HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH LNFNADEAYKNSKLCNILFAKELEKKLKMSSSKISVITWAPGLVIPTDDSGFFRYSKRFN HCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCEEHHHHHH LFGYLIFSKVAKNILGISESIENAGKILSEIVVDSNLNNVGYVHLSNKLLSFKKHKLVES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHH KVSDEANNSELASKLWILSEEICRSFGFVTFNI HHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure MIKYKSILITGGNSGIGFFAIINLLKTKNILYVVIKNEFRKNEFLKKIEKYFDKNYLIKF CCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHH LNIIENCDLSDLENINKIKEYFISKKIFLDTVVLNAGLQYTGSFYPKVSKQGIELTFAVN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHH HLAHFYLVSVLKDFIRDKEESRIIITSSDVHDPKSSGGNIGKKAGLNNLVDFRKKVTGQF HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH LNFNADEAYKNSKLCNILFAKELEKKLKMSSSKISVITWAPGLVIPTDDSGFFRYSKRFN HCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCEEHHHHHH LFGYLIFSKVAKNILGISESIENAGKILSEIVVDSNLNNVGYVHLSNKLLSFKKHKLVES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHH KVSDEANNSELASKLWILSEEICRSFGFVTFNI HHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9559561 [H]