Click here to switch to the map view.

The map label for this gene is glgA [H]

Identifier: 123968200

GI number: 123968200

Start: 588504

End: 589955

Strand: Direct

Name: glgA [H]

Synonym: A9601_06651

Alternate gene names: 123968200

Gene position: 588504-589955 (Clockwise)

Preceding gene: 123968199

Following gene: 123968201

Centisome position: 35.24

GC content: 38.5

Gene sequence:

>1452_bases
ATGAGAATTCTTCTTGCCGCTGCCGAATGTGCTCCAATGATCAAAGTTGGAGGTATGGGAGATGTGGTTGGTTCTTTACC
TCCATCTTTGATAAAACTTGGTCACGATGTGAGAGTAATAATTCCAGGCTATGGGAAATTGTGGAGTCTTTTAGAGGTGT
CGAATGAACCAGTCTTTAGAGCAAATACAATGGGAACTGATTTCGCCGTATATAAAGCAAAACATCCCATTCATAATTAT
GTGATTTACCTAGTGGGTCATCCAACATTTGACTCTGATCAAATATATGGAGGGGAAAATGAGGACTGGCGCTTTACATT
TTTTGCTAGTGCCACTGCAGAATTTGCCTGGAATTATTGGAAACCTCAAGTTCTCCATTGCCATGATTGGCACACTGGAA
TGATTCCTGTTTGGATGCATCAGGATCCCGAAATTAGTACTGTCTTCACAATTCATAATTTAAAATACCAAGGCCCTTGG
AGGTGGAAACTTGAAAAAATGACTTGGTGTCCTTGGTATATGCATGGAGACCACACAATGGCTGCGGCAATGTTGTACGC
AGATAGGGTCAATGCTGTTTCGCCGACTTATGCAGATGAGATTAAAACCCATGAATACGGGGAAAGCCTCGAAGGATTAC
TTAATTACATTTCAGGTAAATTAAGGGGAATTCTTAATGGCATAGATCTTGATGAATGGAATCCAGCCAAAGATCCAGTT
TTACCAGCAAAATTCAGTATTAAGAATTTAGAAAATAGGCTAGAAAATAAAAAAATTCTGCAGAGAGAGATGGGTCTTGA
AGTTAATTCTAAAAAATATCTTTTAGGTATGGTCAGTAGGTTAGTCGATCAGAAAGGGGTTGACTTACTTTTACAAGTTT
CAAGAAGACTATTAGCCTATACAGATTCTCAAATTGCTGTTTTGGGAACTGGAGATAGATATTTAGAGTCAGGATTATGG
CAACTGGCATTAGATTACCCAGGAAGATTCTCAGTATTTCTTACCTATGATGATTCTTTATCAAGGCTTATATATGGTGG
CTCAGATGCATTCTTAATGCCAAGTAGATTTGAACCTTGTGGGATTAGTCAACTCCTCGCGATGAGATATGGCTCTATTC
CAATAGTAAGGCGAGTTGGAGGTTTAGTTGACACAGTTTTACCTCATGACCCAGAAAATAATATTGGCACAGGTTTTTGC
TTCGATCGCTTTGAACCTATAGATTTCTATACATCTTTAGTAAGGTCATGGGAAGCATTTAGGCACAAAGATAGTTGGGA
ATTACTGCAAAAAAGAGCCATGAGCCAAGAGTTTAGTTGGCAAAGATCAGCTCTTGAATACGAAGTTATGTATAAGGATG
TTTGCGGAATAAAAGAACCATCACCAGATGTTGCTGAAGTTGAAAAATTTTCTTACGGACAATCAGCTGATCCATCTTTA
AAAAAAGTATGA

Upstream 100 bases:

>100_bases
AGGTAGAGATGCCTTTCTTGAAAAGCGTCCTCCAGACTTCTCTGACTACAAGTGGACACCCTAATTTATTTTTCAAAAGA
ACTTTATTAAATAATTATCA

Downstream 100 bases:

>100_bases
CTTAATTTTTTAATGGAATTCTCTATATCAGAAATAAACAATGTTTTGGGAGATATTAAAAATCTGAGCGAGGGGAAAAA
AGATTTTTTAAATTTTAAGA

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFRANTMGTDFAVYKAKHPIHNY
VIYLVGHPTFDSDQIYGGENEDWRFTFFASATAEFAWNYWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
LPAKFSIKNLENRLENKKILQREMGLEVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDRYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNIGTGFC
FDRFEPIDFYTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYEVMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
KKV

Sequences:

>Translated_483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFRANTMGTDFAVYKAKHPIHNY
VIYLVGHPTFDSDQIYGGENEDWRFTFFASATAEFAWNYWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
LPAKFSIKNLENRLENKKILQREMGLEVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDRYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNIGTGFC
FDRFEPIDFYTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYEVMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
KKV
>Mature_483_residues
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFRANTMGTDFAVYKAKHPIHNY
VIYLVGHPTFDSDQIYGGENEDWRFTFFASATAEFAWNYWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPW
RWKLEKMTWCPWYMHGDHTMAAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
LPAKFSIKNLENRLENKKILQREMGLEVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDRYLESGLW
QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNIGTGFC
FDRFEPIDFYTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYEVMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
KKV

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=478, Percent_Identity=34.7280334728033, Blast_Score=288, Evalue=6e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 55136; Mature: 55136

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFR
CEEEEEECCCCCEEEECCCHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEE
ANTMGTDFAVYKAKHPIHNYVIYLVGHPTFDSDQIYGGENEDWRFTFFASATAEFAWNYW
ECCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEECCCCCCEEEEEEECCHHHHHHCCC
KPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPWRWKLEKMTWCPWYMHGDHTM
CCCEEEEECCCCCCEEEEECCCCCCEEEEEEECEEECCCCEEEECCEEECEEEEECCHHH
AAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LPAKFSIKNLENRLENKKILQREMGLEVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLLAY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
TDSQIAVLGTGDRYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPC
CCCCEEEEECCHHHHHCCCEEEEECCCCEEEEEEEECCCCCCEEECCCCCEECCCCCCCC
GISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNIGTGFCFDRFEPIDFYTSLVRSWEAF
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH
RHKDSWELLQKRAMSQEFSWQRSALEYEVMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHH
KKV
CCC
>Mature Secondary Structure
MRILLAAAECAPMIKVGGMGDVVGSLPPSLIKLGHDVRVIIPGYGKLWSLLEVSNEPVFR
CEEEEEECCCCCEEEECCCHHHHHCCCHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEE
ANTMGTDFAVYKAKHPIHNYVIYLVGHPTFDSDQIYGGENEDWRFTFFASATAEFAWNYW
ECCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEECCCCCCEEEEEEECCHHHHHHCCC
KPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPWRWKLEKMTWCPWYMHGDHTM
CCCEEEEECCCCCCEEEEECCCCCCEEEEEEECEEECCCCEEEECCEEECEEEEECCHHH
AAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LPAKFSIKNLENRLENKKILQREMGLEVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLLAY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
TDSQIAVLGTGDRYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPC
CCCCEEEEECCHHHHHCCCEEEEECCCCEEEEEEEECCCCCCEEECCCCCEECCCCCCCC
GISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNIGTGFCFDRFEPIDFYTSLVRSWEAF
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH
RHKDSWELLQKRAMSQEFSWQRSALEYEVMYKDVCGIKEPSPDVAEVEKFSYGQSADPSL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHH
KKV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA