| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968124
Identifier: 123968124
GI number: 123968124
Start: 514532
End: 515572
Strand: Direct
Name: 123968124
Synonym: A9601_05891
Alternate gene names: NA
Gene position: 514532-515572 (Clockwise)
Preceding gene: 123968123
Following gene: 123968125
Centisome position: 30.81
GC content: 36.5
Gene sequence:
>1041_bases ATGTTTGGGTTAATAGGCCACTCAACCAGTTTTGAAGATGCAAAAAGAAAAGCTTCGATGCTAGGCTTTGATCACATTGC TGATGGCGACTTGGATGTTTGGTGTACTGCTCCTCCTCAGCTTGTTGAAAATGTAGAAGTTAAGAGTGCAACTGGAATAT CTATTGAAGGTTCTTATATAGATTCTTGCTTTGTTCCAGAAATGCTTTCTAGGTTTAAAACCGCTAGAAGAAAAGTACTA AATGCTATGGAACTAGCTCAGAAAAAAGGGATTAATATTACAGCTTTAGGAGGATTTACTTCTATTATTTTTGAGAATTT TAATCTTCTACAGCATAAACAAATTAGAAATACTTCATTAGAGTGGGAAAGATTTACTACTGGCAATACTCATACCGCCT GGGTTATTTGTAAGCAACTAGAAATAAATGCTCCTCGCATTGGGATAGACCTTAAAAAAGCAACTGTTGCTGTAATTGGT GCTACAGGTGATATTGGTAGCGCTGTTTGTAGGTGGCTTATCAATAAAACTGGGATTTCAGAACTCCTTATGGTAGCAAG ACAACAAGAACCTCTAGCGCTGTTACAAAAAGAATTAGATGGTGGCACCATAACAAGTTTGGATGAGGCATTGCCTCAGG CGGACATTGTTGTGTGGGTTGCAAGTATGCCTAAAACTATTGAAATTAATACTGACAACTTACAAAAACCATGTTTAATG ATTGATGGTGGATATCCCAAAAATCTTGATGAGAAATTTCAGGGTGAAAATATTTATGTTTTAAAAGGAGGTATAGTAGA GTTTTTCAATGATATTGGTTGGAATATGATGGAACTTGCGGAAATGCAAAACCCTCAGCGAGAGATGTTTGCTTGCTTTG CAGAAGCTATGATTTTAGAATTTGAGAAGTGTCATACAAACTTTAGTTGGGGAAGAAATAACATTTCCCTTGAAAAGATG GAATTTATTGGAGCAGCTTCTTTAAAGCATGGTTTTTCCGCCATTGGACTTGATAAGCAGCCTAAAGTATTAACTGTCTA A
Upstream 100 bases:
>100_bases TAATTAATTAAGGCTTTTTAATAATTAATCAATCCTATTTAAGTAGTTATCTCTGTGCTATTGTTCTTAACATCGTATAG AAACCATTTATAAATTTTAA
Downstream 100 bases:
>100_bases ATCATGGCTAAACGTTACCTTCTTGATTTTGAAAAGCCTCTTGTTGAACTTGAGAAGCAGATAGAGCAAATTAAAGAATT AGCTCGAGATTCAGAGGTAG
Product: dehydrogenase
Products: NA
Alternate protein names: Dehydrogenase; Dehydrogenase-Like Protein; Acyl-ACP Reductase; Dehydrogenase Like; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MFGLIGHSTSFEDAKRKASMLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICKQLEINAPRIGIDLKKATVAVIG ATGDIGSAVCRWLINKTGISELLMVARQQEPLALLQKELDGGTITSLDEALPQADIVVWVASMPKTIEINTDNLQKPCLM IDGGYPKNLDEKFQGENIYVLKGGIVEFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM EFIGAASLKHGFSAIGLDKQPKVLTV
Sequences:
>Translated_346_residues MFGLIGHSTSFEDAKRKASMLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICKQLEINAPRIGIDLKKATVAVIG ATGDIGSAVCRWLINKTGISELLMVARQQEPLALLQKELDGGTITSLDEALPQADIVVWVASMPKTIEINTDNLQKPCLM IDGGYPKNLDEKFQGENIYVLKGGIVEFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM EFIGAASLKHGFSAIGLDKQPKVLTV >Mature_346_residues MFGLIGHSTSFEDAKRKASMLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSLEWERFTTGNTHTAWVICKQLEINAPRIGIDLKKATVAVIG ATGDIGSAVCRWLINKTGISELLMVARQQEPLALLQKELDGGTITSLDEALPQADIVVWVASMPKTIEINTDNLQKPCLM IDGGYPKNLDEKFQGENIYVLKGGIVEFFNDIGWNMMELAEMQNPQREMFACFAEAMILEFEKCHTNFSWGRNNISLEKM EFIGAASLKHGFSAIGLDKQPKVLTV
Specific function: Unknown
COG id: COG5322
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38455; Mature: 38455
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLIGHSTSFEDAKRKASMLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYI CCCCCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEECCCHHHHHCCCCCCCCCCEEECCCC DSCFVPEMLSRFKTARRKVLNAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHCCCC EWERFTTGNTHTAWVICKQLEINAPRIGIDLKKATVAVIGATGDIGSAVCRWLINKTGIS CEEEECCCCCEEEEEEEEEEECCCCEECEEEEEEEEEEEECCCCHHHHHHHHHHHHCCHH ELLMVARQQEPLALLQKELDGGTITSLDEALPQADIVVWVASMPKTIEINTDNLQKPCLM HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEE IDGGYPKNLDEKFQGENIYVLKGGIVEFFNDIGWNMMELAEMQNPQREMFACFAEAMILE EECCCCCCCHHHHCCCEEEEEECCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH FEKCHTNFSWGRNNISLEKMEFIGAASLKHGFSAIGLDKQPKVLTV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC >Mature Secondary Structure MFGLIGHSTSFEDAKRKASMLGFDHIADGDLDVWCTAPPQLVENVEVKSATGISIEGSYI CCCCCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEECCCHHHHHCCCCCCCCCCEEECCCC DSCFVPEMLSRFKTARRKVLNAMELAQKKGINITALGGFTSIIFENFNLLQHKQIRNTSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCHHHHHHHHCCCC EWERFTTGNTHTAWVICKQLEINAPRIGIDLKKATVAVIGATGDIGSAVCRWLINKTGIS CEEEECCCCCEEEEEEEEEEECCCCEECEEEEEEEEEEEECCCCHHHHHHHHHHHHCCHH ELLMVARQQEPLALLQKELDGGTITSLDEALPQADIVVWVASMPKTIEINTDNLQKPCLM HHHHHHCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEE IDGGYPKNLDEKFQGENIYVLKGGIVEFFNDIGWNMMELAEMQNPQREMFACFAEAMILE EECCCCCCCHHHHCCCEEEEEECCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH FEKCHTNFSWGRNNISLEKMEFIGAASLKHGFSAIGLDKQPKVLTV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA