Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968107

Identifier: 123968107

GI number: 123968107

Start: 497070

End: 498431

Strand: Direct

Name: 123968107

Synonym: A9601_05721

Alternate gene names: NA

Gene position: 497070-498431 (Clockwise)

Preceding gene: 123968105

Following gene: 123968108

Centisome position: 29.77

GC content: 26.95

Gene sequence:

>1362_bases
ATGATCTTTCAAAATACTTCTAAGTCAAAACTCACTTTAGCTTTTATTTCTATCGTCATAACTTTTTTTGTATGGCAACA
AGGATTAAGAGATAGTTTAAATAGACCATCTGTTTCATTTGATATTAGTCAAAAAGAGCAAGAAATTGCTGAATTATCTG
TCCAATCAATACCTGTAAATTTTAAAAAATTTTTTATCATTAATGATCCTGTTGTTCAAATAAATAAATCACTCTCTGAT
GTCTCATTTGAAGAGCTAACAGAAAGAAATAAATTAATTCGAATAATTACTTCAGAATCAAATGATCCTTTAATTTATAA
AAATATATCCAAAGATTTTCAAGATAAAAACTATCAATTTCTGATTGATGAGATAGAAAAAAAATCTAATAACAATTCAT
ATAAAGTAAATTCTGAAAAATTTGATTTATTTAAAGGTGATAGATTTTTATATCACCTTTTAAGCAGGAAATTTGATTTT
GACGATAGTGCATTAATAACAAAATCATTTTCAAGCAAAATGTTTTTTAAAATATTAGCCATAAGACTAATACCACTTTT
AACAATACTTATTGGCTCTATTCTGGCTTTAAAAATAATATGGACAACTATATCTTTGAAAAAGTTTGGTTGGAAAGAAA
TTAAATCCTTAGATTTAGAACTAATTGATATGGTTTTATTAATTGCGGGTGGATTTGTTGTTTTAGGAGAAGTGGTATCA
CCTTTATTTTCTATCAGTTTGGTCGAACTTTTTTCTAAAAATATCTCTAATGAATTGTCTCAATCTTTAAAAATTTTCTT
TGGATATCTTTTTATGGCTATTCCTCCATTATGGATAGTTTTTTATCAAATTAAATCCTTAAATGGTGAATTTACTTTTA
AAAAGGATTATTTACAGTTCAATTTCTTGCCAATAAAATATGCAATTATTCAGGGAATTAAAGGTTGGTTAACAATTGTG
CCTTTTGTTTTATTGATCTCTCTAATTATGAATAGTCTGATCGATAATCAGAATGGTAGTAACCCGTTGCTGGAAATTGT
TCTTAATAATAATAATTACTTATCATTTTTTCTATTATTTGTAACAACAACTCTATTAGCTCCTCTATTTGAAGAGATTA
TATTTCGCGGTATTTTACTACCAACTCTTTCAAGAGATTTTGGAGTTATTTCGGGTATCATAGTTTCAGCTTTTATCTTT
GCATTAGCCCATTTAAGTTTGGGAGAAATGCCGCCATTATTTGTTCTAGGGATTGGATTAGCAATTACGAGAATTGCTTC
AGGGAGTTTATTTTCCTCAGTGATTATGCATTCTTTATGGAATGGATTGACTTTCTTAAATTTGTTTTTATTGAGGACAT
AA

Upstream 100 bases:

>100_bases
TTAAGATAATTTAATCATCTCATGGCGTGATTAAAATAGATACATAGAAATAAGGAAATTCAATGATAACTAACTATAGT
TTTCAAGAATATAATAAGTT

Downstream 100 bases:

>100_bases
AGAATTTATTTTTTTACTTGCGAATCAAACAAAAAGATGTTTATTTAATTTATAACACTTCTTTTATTTAGTAATAAATC
TTAGATGAAACCTTATGGGC

Product: membrane-associated protease

Products: NA

Alternate protein names: Membrane-Associated Protease; Metal-Dependent Membrane Protease; Membrane Associated Protease; CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; Caax Amino Terminal Protease Family Protein; Membrane Associated Protease-Like; CAAX Amino Protease

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MIFQNTSKSKLTLAFISIVITFFVWQQGLRDSLNRPSVSFDISQKEQEIAELSVQSIPVNFKKFFIINDPVVQINKSLSD
VSFEELTERNKLIRIITSESNDPLIYKNISKDFQDKNYQFLIDEIEKKSNNNSYKVNSEKFDLFKGDRFLYHLLSRKFDF
DDSALITKSFSSKMFFKILAIRLIPLLTILIGSILALKIIWTTISLKKFGWKEIKSLDLELIDMVLLIAGGFVVLGEVVS
PLFSISLVELFSKNISNELSQSLKIFFGYLFMAIPPLWIVFYQIKSLNGEFTFKKDYLQFNFLPIKYAIIQGIKGWLTIV
PFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLFVTTTLLAPLFEEIIFRGILLPTLSRDFGVISGIIVSAFIF
ALAHLSLGEMPPLFVLGIGLAITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT

Sequences:

>Translated_453_residues
MIFQNTSKSKLTLAFISIVITFFVWQQGLRDSLNRPSVSFDISQKEQEIAELSVQSIPVNFKKFFIINDPVVQINKSLSD
VSFEELTERNKLIRIITSESNDPLIYKNISKDFQDKNYQFLIDEIEKKSNNNSYKVNSEKFDLFKGDRFLYHLLSRKFDF
DDSALITKSFSSKMFFKILAIRLIPLLTILIGSILALKIIWTTISLKKFGWKEIKSLDLELIDMVLLIAGGFVVLGEVVS
PLFSISLVELFSKNISNELSQSLKIFFGYLFMAIPPLWIVFYQIKSLNGEFTFKKDYLQFNFLPIKYAIIQGIKGWLTIV
PFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLFVTTTLLAPLFEEIIFRGILLPTLSRDFGVISGIIVSAFIF
ALAHLSLGEMPPLFVLGIGLAITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT
>Mature_453_residues
MIFQNTSKSKLTLAFISIVITFFVWQQGLRDSLNRPSVSFDISQKEQEIAELSVQSIPVNFKKFFIINDPVVQINKSLSD
VSFEELTERNKLIRIITSESNDPLIYKNISKDFQDKNYQFLIDEIEKKSNNNSYKVNSEKFDLFKGDRFLYHLLSRKFDF
DDSALITKSFSSKMFFKILAIRLIPLLTILIGSILALKIIWTTISLKKFGWKEIKSLDLELIDMVLLIAGGFVVLGEVVS
PLFSISLVELFSKNISNELSQSLKIFFGYLFMAIPPLWIVFYQIKSLNGEFTFKKDYLQFNFLPIKYAIIQGIKGWLTIV
PFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLFVTTTLLAPLFEEIIFRGILLPTLSRDFGVISGIIVSAFIF
ALAHLSLGEMPPLFVLGIGLAITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51660; Mature: 51660

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFQNTSKSKLTLAFISIVITFFVWQQGLRDSLNRPSVSFDISQKEQEIAELSVQSIPVN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCC
FKKFFIINDPVVQINKSLSDVSFEELTERNKLIRIITSESNDPLIYKNISKDFQDKNYQF
EEEEEEECCCHHHHCCCCCCCCHHHHHHHCCEEEEEECCCCCCEEEECCCHHCCCCCHHH
LIDEIEKKSNNNSYKVNSEKFDLFKGDRFLYHLLSRKFDFDDSALITKSFSSKMFFKILA
HHHHHHHCCCCCCEEECCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
IRLIPLLTILIGSILALKIIWTTISLKKFGWKEIKSLDLELIDMVLLIAGGFVVLGEVVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
PLFSISLVELFSKNISNELSQSLKIFFGYLFMAIPPLWIVFYQIKSLNGEFTFKKDYLQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEE
NFLPIKYAIIQGIKGWLTIVPFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLF
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHH
VTTTLLAPLFEEIIFRGILLPTLSRDFGVISGIIVSAFIFALAHLSLGEMPPLFVLGIGL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFQNTSKSKLTLAFISIVITFFVWQQGLRDSLNRPSVSFDISQKEQEIAELSVQSIPVN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCC
FKKFFIINDPVVQINKSLSDVSFEELTERNKLIRIITSESNDPLIYKNISKDFQDKNYQF
EEEEEEECCCHHHHCCCCCCCCHHHHHHHCCEEEEEECCCCCCEEEECCCHHCCCCCHHH
LIDEIEKKSNNNSYKVNSEKFDLFKGDRFLYHLLSRKFDFDDSALITKSFSSKMFFKILA
HHHHHHHCCCCCCEEECCCHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
IRLIPLLTILIGSILALKIIWTTISLKKFGWKEIKSLDLELIDMVLLIAGGFVVLGEVVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
PLFSISLVELFSKNISNELSQSLKIFFGYLFMAIPPLWIVFYQIKSLNGEFTFKKDYLQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEE
NFLPIKYAIIQGIKGWLTIVPFVLLISLIMNSLIDNQNGSNPLLEIVLNNNNYLSFFLLF
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHH
VTTTLLAPLFEEIIFRGILLPTLSRDFGVISGIIVSAFIFALAHLSLGEMPPLFVLGIGL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AITRIASGSLFSSVIMHSLWNGLTFLNLFLLRT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA