Click here to switch to the map view.

The map label for this gene is miaE

Identifier: 123967976

GI number: 123967976

Start: 381534

End: 382142

Strand: Direct

Name: miaE

Synonym: A9601_04391

Alternate gene names: NA

Gene position: 381534-382142 (Clockwise)

Preceding gene: 123967975

Following gene: 123967977

Centisome position: 22.85

GC content: 34.65

Gene sequence:

>609_bases
ATGCTAGTCGATTTTAAAAGGCCTATTTCTCATATTAAATATTTAAAGTCATTTACCTCGGATGAATGGATCAAACTCGC
ATTATCTAATCCAATAGAAGTTCTTATTGATCATGCTCATTGTGAAAGAAAAGCAGCAGGAGTAGCTATTCAATTGATGT
TTAGATATCCATCAGAACCAAATCTGGCAGAAGTTCTTAGTCCAATAGCGAGAGAGGAATTAGAGCATTTTGAAAAAATA
CTTTATTTTTTAAAGGATCTTGGATATTCTCTTGAGTCCTTAAAACCGCCTCCATATGGAGCTGAATTGTCCAAGAATAT
AAGAAAGGAAGAGCCCAATAGAATGCTTGATAGTTTCTTAATAGCAGGACTTATTGAAGCAAGAAGTCATGAAAGATTAA
GTTTGCTTGCGCTGAATTCTGAAGATAAATCGTTTAAATCCCTTTATGAGTCTCTGCTTGAGAGTGAGGCAAGACATTTT
GGAGTTTACTGGAAACTAGCGCAAACTAAATTCTCTAAAAATCAAACTTTCAAAAGGTTAGAGGAATTGTCTGAAATTGA
GGCATCAATACTAGCTGAAACTTACTTATTGCCAAGGGTACATAGCTAA

Upstream 100 bases:

>100_bases
TCTTACAGATAAAGCTATAGGAATTATTAGTGGATTTGGGATATCAAGTTATTCCTTAGCTCTTGAAGGAATCATTGGAT
ATTTAAGTAGTAAAGATTAA

Downstream 100 bases:

>100_bases
AGTTAATAAAATAAAAATGATTATAAACAAGTTCTTAAGCTTACTTAATCGATATAAAACTGATTTACCAACATTCACCA
TCGTTGGTGTAGGCCCTGGA

Product: putative tRNA-(MS[2]IO[6]A)-hydroxylase-like protein

Products: NA

Alternate protein names: TRNA-(MS[2]IO[6]A)-Hydroxylase; TRNA-(Ms[2]Io[6]A)-Hydroxylase; TRNA-(Ms(2)Io(6)A)-Hydroxylase; TRNA-(MS[2]IO[6]A)-Hydroxylase Subfamily; tRNA Hydroxylase; TRNA-(MS(2)IO(6)A)-Hydroxylase-Like; TRNA-(MS[2]IO[6]A)-Hydroxylase-Like Protein; Probably TRNA-(MS[2]IO[6]A)-Hydroxylase; TRNA-(MS(2)IO(6)A)-Hydroxylase; Hydroxylase; TRNA-(MS 2)O6-A-Hydroxylase; tRNA Hydroxylase-Like Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLVDFKRPISHIKYLKSFTSDEWIKLALSNPIEVLIDHAHCERKAAGVAIQLMFRYPSEPNLAEVLSPIAREELEHFEKI
LYFLKDLGYSLESLKPPPYGAELSKNIRKEEPNRMLDSFLIAGLIEARSHERLSLLALNSEDKSFKSLYESLLESEARHF
GVYWKLAQTKFSKNQTFKRLEELSEIEASILAETYLLPRVHS

Sequences:

>Translated_202_residues
MLVDFKRPISHIKYLKSFTSDEWIKLALSNPIEVLIDHAHCERKAAGVAIQLMFRYPSEPNLAEVLSPIAREELEHFEKI
LYFLKDLGYSLESLKPPPYGAELSKNIRKEEPNRMLDSFLIAGLIEARSHERLSLLALNSEDKSFKSLYESLLESEARHF
GVYWKLAQTKFSKNQTFKRLEELSEIEASILAETYLLPRVHS
>Mature_202_residues
MLVDFKRPISHIKYLKSFTSDEWIKLALSNPIEVLIDHAHCERKAAGVAIQLMFRYPSEPNLAEVLSPIAREELEHFEKI
LYFLKDLGYSLESLKPPPYGAELSKNIRKEEPNRMLDSFLIAGLIEARSHERLSLLALNSEDKSFKSLYESLLESEARHF
GVYWKLAQTKFSKNQTFKRLEELSEIEASILAETYLLPRVHS

Specific function: Unknown

COG id: COG4445

COG function: function code FJ; Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23381; Mature: 23381

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVDFKRPISHIKYLKSFTSDEWIKLALSNPIEVLIDHAHCERKAAGVAIQLMFRYPSEP
CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCC
NLAEVLSPIAREELEHFEKILYFLKDLGYSLESLKPPPYGAELSKNIRKEEPNRMLDSFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHH
IAGLIEARSHERLSLLALNSEDKSFKSLYESLLESEARHFGVYWKLAQTKFSKNQTFKRL
HHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELSEIEASILAETYLLPRVHS
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLVDFKRPISHIKYLKSFTSDEWIKLALSNPIEVLIDHAHCERKAAGVAIQLMFRYPSEP
CCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCC
NLAEVLSPIAREELEHFEKILYFLKDLGYSLESLKPPPYGAELSKNIRKEEPNRMLDSFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHH
IAGLIEARSHERLSLLALNSEDKSFKSLYESLLESEARHFGVYWKLAQTKFSKNQTFKRL
HHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELSEIEASILAETYLLPRVHS
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA