| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967969
Identifier: 123967969
GI number: 123967969
Start: 372921
End: 373733
Strand: Direct
Name: 123967969
Synonym: A9601_04321
Alternate gene names: NA
Gene position: 372921-373733 (Clockwise)
Preceding gene: 123967968
Following gene: 123967975
Centisome position: 22.33
GC content: 27.68
Gene sequence:
>813_bases ATGATCTATTTACTTCCTCAAATTCAAGATTTTACTGCAAATAAATTACTTGATTTATTTATAGAAAAAAGTTCAGTTGG AAAATTTAATCCTGAATATAAAGAAAGATTTTATACTGCTACAGGTGGACAAAGAATCCCTATTGATTATTTGTTAGATT TGCGTCGATCTATTTTAAATTGTGCAAACAAATATAATTTTCCTAACAAGCAAAAGTCTTTTCTTGATTTCGAATATGAA GTGGCAGAAATTTTTTTTAATTGGCCTTATTTATGGATTGATCAAAATAATAAAGAGCCAAATGGGGAGGCATTAAGAAA TAATTTTTGGTCTTATATAACTATAATTTTAATGCCTGATATCGCCGTTTGGAGGTGGCCTATACCTTCTGAAAATGCTT CTAAAAAATCATGGGAGGTTCGGATGAAAGGTGGTGGTACAAGAAATACTTTTCAAAGGATTTTTAGAAGATTAATTAGT TTTGATAAAGGTAAAGAATATCAACTTCATGAAAGATTAAATCTGATAAAAGGTTTAAATGAGGACGAGTTTCAAGCCAT TATTGAGAGAACAAGTGTAAGCTCATGCTCTAAACTTTCCATCTTGTTGGCAGAGGAAATTATTTCTAGAAAAAAATTAA ATATGCAAACTGATAAAGTTAAACAAGATATTTATCGAAATTCAATAATAGATTTAACTGCCTATGGCAAAGTTCAATCA TTTGATTTATTGGAAGATATAGAATTGAAAGAATTAATTGCAAAAGTTTTTGAATTAAAAGAAAGTGAAATTTTAGAATT AAAAAATTTATAG
Upstream 100 bases:
>100_bases CTTTATTGAAGGTCCAAGTGATTTGCAAAATTTGATAAAAAAGATCAAGTCAAGTCCTAATGATTTTAACTGTGAATGTC AAAGCATTTTTTGTGATTAG
Downstream 100 bases:
>100_bases ATTTTTAAATTTCCTATTTATGAGACATCTCTAAATTCTTTTGAATAAACTTGAGATATTTTTTCAATATTATTTATTTC TAGATCTTCTGTATTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MIYLLPQIQDFTANKLLDLFIEKSSVGKFNPEYKERFYTATGGQRIPIDYLLDLRRSILNCANKYNFPNKQKSFLDFEYE VAEIFFNWPYLWIDQNNKEPNGEALRNNFWSYITIILMPDIAVWRWPIPSENASKKSWEVRMKGGGTRNTFQRIFRRLIS FDKGKEYQLHERLNLIKGLNEDEFQAIIERTSVSSCSKLSILLAEEIISRKKLNMQTDKVKQDIYRNSIIDLTAYGKVQS FDLLEDIELKELIAKVFELKESEILELKNL
Sequences:
>Translated_270_residues MIYLLPQIQDFTANKLLDLFIEKSSVGKFNPEYKERFYTATGGQRIPIDYLLDLRRSILNCANKYNFPNKQKSFLDFEYE VAEIFFNWPYLWIDQNNKEPNGEALRNNFWSYITIILMPDIAVWRWPIPSENASKKSWEVRMKGGGTRNTFQRIFRRLIS FDKGKEYQLHERLNLIKGLNEDEFQAIIERTSVSSCSKLSILLAEEIISRKKLNMQTDKVKQDIYRNSIIDLTAYGKVQS FDLLEDIELKELIAKVFELKESEILELKNL >Mature_270_residues MIYLLPQIQDFTANKLLDLFIEKSSVGKFNPEYKERFYTATGGQRIPIDYLLDLRRSILNCANKYNFPNKQKSFLDFEYE VAEIFFNWPYLWIDQNNKEPNGEALRNNFWSYITIILMPDIAVWRWPIPSENASKKSWEVRMKGGGTRNTFQRIFRRLIS FDKGKEYQLHERLNLIKGLNEDEFQAIIERTSVSSCSKLSILLAEEIISRKKLNMQTDKVKQDIYRNSIIDLTAYGKVQS FDLLEDIELKELIAKVFELKESEILELKNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31920; Mature: 31920
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLLPQIQDFTANKLLDLFIEKSSVGKFNPEYKERFYTATGGQRIPIDYLLDLRRSILN CEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCCCCHHHHHHHHHHHHH CANKYNFPNKQKSFLDFEYEVAEIFFNWPYLWIDQNNKEPNGEALRNNFWSYITIILMPD HHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEECC IAVWRWPIPSENASKKSWEVRMKGGGTRNTFQRIFRRLISFDKGKEYQLHERLNLIKGLN CCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC EDEFQAIIERTSVSSCSKLSILLAEEIISRKKLNMQTDKVKQDIYRNSIIDLTAYGKVQS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCC FDLLEDIELKELIAKVFELKESEILELKNL CHHHHHCCHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MIYLLPQIQDFTANKLLDLFIEKSSVGKFNPEYKERFYTATGGQRIPIDYLLDLRRSILN CEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCCCCHHHHHHHHHHHHH CANKYNFPNKQKSFLDFEYEVAEIFFNWPYLWIDQNNKEPNGEALRNNFWSYITIILMPD HHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEECC IAVWRWPIPSENASKKSWEVRMKGGGTRNTFQRIFRRLISFDKGKEYQLHERLNLIKGLN CCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC EDEFQAIIERTSVSSCSKLSILLAEEIISRKKLNMQTDKVKQDIYRNSIIDLTAYGKVQS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCC FDLLEDIELKELIAKVFELKESEILELKNL CHHHHHCCHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA