| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123967869
Identifier: 123967869
GI number: 123967869
Start: 305063
End: 305698
Strand: Reverse
Name: 123967869
Synonym: A9601_03321
Alternate gene names: NA
Gene position: 305698-305063 (Counterclockwise)
Preceding gene: 123967871
Following gene: 123967868
Centisome position: 18.31
GC content: 33.81
Gene sequence:
>636_bases ATGAATAAAATACAAAAATTTCTCTCAGTAGTTTTTTTTATAGCAATATTCGTTGTTTTAATTTACTTAATCCAAAATTA TGGAATTGAACCTCTTAGAAACAAAATAGAAAGTATGGGAATTTGGGCACCTTTTGGAATATTCATACTTAGAGGAGTAA GTATTATTTTGCCCGCTCTTCCAAGTTCAGCTTATTCTCTGCTAGCTGGTTCATTACTAGGATTTCAAAGAGGTTACATG ACAATAATCTTCTCTGATATTGTTTTTTGCCAAGCTGCTTTCTTTATTGCAAGAAATTATGGTCGGGTTCCTGTACGTAA TTTAGTAGGCCAGAAAGCAATGAAAAAGATTGAAAGTTTTAATCAAAACCAGCTAGAAGAAAATTTCTTTCTTATGACAG GTCTTCTAATGACTGGCCTTTTTGATTTTCTAAGCTACGCAATTGGTATTGGAGGAACTCGCTGGAAAATATTTACTCCT GCATTATTAATAAGTCTCCTAATCAGTGACTCTATACTTGTCGCAGTAGGAGCTGGAGTTAGTCAGGGAGCAGGATTATT TCTTGGAATTGCTCTATTGGGAATGTTTGCTTTAGCGACTATTTCAGGATTGGCAAAAAATAAAATGCCTAAATAA
Upstream 100 bases:
>100_bases TTAAAAATTTGTAAAAATTTTTATTGATTAGTATTTCTATTATAGATACAATCAAATATTAAATTCAAAATTTACTTCCA ATAAGTTAATTAGAAAGATA
Downstream 100 bases:
>100_bases CAAAACAGTTGATAATTCTGTAAGCAAAGAAGAAAGATATGACATTTTCGCAAACAATAAATATATAAATAATGATTCAT GCAAGAATAGAGTTCGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPALPSSAYSLLAGSLLGFQRGYM TIIFSDIVFCQAAFFIARNYGRVPVRNLVGQKAMKKIESFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTP ALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALATISGLAKNKMPK
Sequences:
>Translated_211_residues MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPALPSSAYSLLAGSLLGFQRGYM TIIFSDIVFCQAAFFIARNYGRVPVRNLVGQKAMKKIESFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTP ALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALATISGLAKNKMPK >Mature_211_residues MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPALPSSAYSLLAGSLLGFQRGYM TIIFSDIVFCQAAFFIARNYGRVPVRNLVGQKAMKKIESFNQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTP ALLISLLISDSILVAVGAGVSQGAGLFLGIALLGMFALATISGLAKNKMPK
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23107; Mature: 23107
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PSSAYSLLAGSLLGFQRGYMTIIFSDIVFCQAAFFIARNYGRVPVRNLVGQKAMKKIESF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC NQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTPALLISLLISDSILVAVGAGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCC SQGAGLFLGIALLGMFALATISGLAKNKMPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKIQKFLSVVFFIAIFVVLIYLIQNYGIEPLRNKIESMGIWAPFGIFILRGVSIILPAL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PSSAYSLLAGSLLGFQRGYMTIIFSDIVFCQAAFFIARNYGRVPVRNLVGQKAMKKIESF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC NQNQLEENFFLMTGLLMTGLFDFLSYAIGIGGTRWKIFTPALLISLLISDSILVAVGAGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCC SQGAGLFLGIALLGMFALATISGLAKNKMPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA