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The map label for this gene is degT [H]

Identifier: 123967844

GI number: 123967844

Start: 283335

End: 284540

Strand: Direct

Name: degT [H]

Synonym: A9601_03071

Alternate gene names: 123967844

Gene position: 283335-284540 (Clockwise)

Preceding gene: 123967843

Following gene: 123967848

Centisome position: 16.97

GC content: 31.34

Gene sequence:

>1206_bases
ATGCAGATACCTCCATTTACTTTAGAAAGGCAGTTCCAAGAAATTGGCTCTGAAATTGAGAGTGAGGTTTCTAAAGTTTT
AAAAGGGGGCCAGTATATTGGAGGACAAGTAATTGCCAAATTTGAGGAGAGTTTTTCAAATCTGATTGGTGTTGAAAATA
CTATTGGATGTAATAGTGGAACTGATGCTTTAGTATTAGCTCTGCGCGCCTTAAATATTGGTGTGGGTGATGAAGTTATT
ACTTCATCTTTTAGCTTTTTTGCAACTGCAGAGGCTATTAGTGCAGTTGGCGCTAATCCTGTTTTGGTGGATATAGATCC
AGAAACTTATCTCATTAATACTGAACTAATAGAACAAGAAATAAATCCTAATACAAAGGCAATTATGCCAGTTCATCTAT
TTGGTAATGCAGTGAATATGACCTTAATAAAATCTTTGGCAAAGAAATATGACTTAAAAGTAATTGAAGATTGTGCTCAG
GCAACATGCACAATGTGGGAAACTTCCAAAGTTGGTAGTATCGGTGATATAGGCTGTTTTAGCTTTTTCCCTACTAAAAA
TTTAGGAGCTGCTGGAGATGGTGGAGCAGTAACAACTTCAGATAAGGAGATTGCAAAAAAAATTAGAGAACTGGCTGTTC
ATGGCAGCCCAATAAGATATCACCATACCCAAATTGGATATAACAGCAGACTTGATACCATTCAAGCTGCCATATTAAAC
ATTAAAATTAAATATATTTCTAAGTGGATTAATTATCGCCAAAAAATTGCTAATAATTATCTTGATTTATTAGAAAAAAA
TCCATTTATAAGTTTTCCAAAAATTAGTTCTGATTCAATTTCCCATTCTTGGAATCAATTTGTAATCAAATTAAGAAACG
ATGAATATTCTTTAAATGAAGATTTTTCAAATTTATTTGATACTGATTGCAAAAAATACTATTCCTTAAGGAATTTGGTA
AAACAACAACTTTTCGAAAAAGGTATTAATTCAATTATTTATTATCCAATTCCAATACACGCACAAATAGCTTACAAAAA
TAAAAATTTTTCTAGAACAAAACTCATTAATACAGAGAGAATTTGTACTGAAGTTCTTAGTCTGCCAATGTTTCCTGAAA
TTTCTTATGAAGAGCAAGTTTATGTAGCAGAAAATCTAAATAAAGTTTTAAAGAATTGTATAGAGGAAATTCAAATTTCA
GCATAA

Upstream 100 bases:

>100_bases
GCAATATAAAATGGACTCCTGGTAAAGAACCAAGTTGGTTTAAATGAAATAAAAAATTTTTTTACCCATAGAAATATGGT
TTAGGGTTAATATATTTACT

Downstream 100 bases:

>100_bases
AGTGATTTAAATAATCTTTGTTGTATCTTGTGATTGACAATAGGGCTTGAATAATCATTTTTTTCTAAATTAGATATATC
CCCATTTAATAATTCTGAAT

Product: putative pleiotropic regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MQIPPFTLERQFQEIGSEIESEVSKVLKGGQYIGGQVIAKFEESFSNLIGVENTIGCNSGTDALVLALRALNIGVGDEVI
TSSFSFFATAEAISAVGANPVLVDIDPETYLINTELIEQEINPNTKAIMPVHLFGNAVNMTLIKSLAKKYDLKVIEDCAQ
ATCTMWETSKVGSIGDIGCFSFFPTKNLGAAGDGGAVTTSDKEIAKKIRELAVHGSPIRYHHTQIGYNSRLDTIQAAILN
IKIKYISKWINYRQKIANNYLDLLEKNPFISFPKISSDSISHSWNQFVIKLRNDEYSLNEDFSNLFDTDCKKYYSLRNLV
KQQLFEKGINSIIYYPIPIHAQIAYKNKNFSRTKLINTERICTEVLSLPMFPEISYEEQVYVAENLNKVLKNCIEEIQIS
A

Sequences:

>Translated_401_residues
MQIPPFTLERQFQEIGSEIESEVSKVLKGGQYIGGQVIAKFEESFSNLIGVENTIGCNSGTDALVLALRALNIGVGDEVI
TSSFSFFATAEAISAVGANPVLVDIDPETYLINTELIEQEINPNTKAIMPVHLFGNAVNMTLIKSLAKKYDLKVIEDCAQ
ATCTMWETSKVGSIGDIGCFSFFPTKNLGAAGDGGAVTTSDKEIAKKIRELAVHGSPIRYHHTQIGYNSRLDTIQAAILN
IKIKYISKWINYRQKIANNYLDLLEKNPFISFPKISSDSISHSWNQFVIKLRNDEYSLNEDFSNLFDTDCKKYYSLRNLV
KQQLFEKGINSIIYYPIPIHAQIAYKNKNFSRTKLINTERICTEVLSLPMFPEISYEEQVYVAENLNKVLKNCIEEIQIS
A
>Mature_401_residues
MQIPPFTLERQFQEIGSEIESEVSKVLKGGQYIGGQVIAKFEESFSNLIGVENTIGCNSGTDALVLALRALNIGVGDEVI
TSSFSFFATAEAISAVGANPVLVDIDPETYLINTELIEQEINPNTKAIMPVHLFGNAVNMTLIKSLAKKYDLKVIEDCAQ
ATCTMWETSKVGSIGDIGCFSFFPTKNLGAAGDGGAVTTSDKEIAKKIRELAVHGSPIRYHHTQIGYNSRLDTIQAAILN
IKIKYISKWINYRQKIANNYLDLLEKNPFISFPKISSDSISHSWNQFVIKLRNDEYSLNEDFSNLFDTDCKKYYSLRNLV
KQQLFEKGINSIIYYPIPIHAQIAYKNKNFSRTKLINTERICTEVLSLPMFPEISYEEQVYVAENLNKVLKNCIEEIQIS
A

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=389, Percent_Identity=29.8200514138817, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI2367285, Length=384, Percent_Identity=30.9895833333333, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44918; Mature: 44918

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIPPFTLERQFQEIGSEIESEVSKVLKGGQYIGGQVIAKFEESFSNLIGVENTIGCNSG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
TDALVLALRALNIGVGDEVITSSFSFFATAEAISAVGANPVLVDIDPETYLINTELIEQE
CHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHH
INPNTKAIMPVHLFGNAVNMTLIKSLAKKYDLKVIEDCAQATCTMWETSKVGSIGDIGCF
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
SFFPTKNLGAAGDGGAVTTSDKEIAKKIRELAVHGSPIRYHHTQIGYNSRLDTIQAAILN
ECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
IKIKYISKWINYRQKIANNYLDLLEKNPFISFPKISSDSISHSWNQFVIKLRNDEYSLNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCCH
DFSNLFDTDCKKYYSLRNLVKQQLFEKGINSIIYYPIPIHAQIAYKNKNFSRTKLINTER
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCHHHCCCHHH
ICTEVLSLPMFPEISYEEQVYVAENLNKVLKNCIEEIQISA
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQIPPFTLERQFQEIGSEIESEVSKVLKGGQYIGGQVIAKFEESFSNLIGVENTIGCNSG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
TDALVLALRALNIGVGDEVITSSFSFFATAEAISAVGANPVLVDIDPETYLINTELIEQE
CHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHH
INPNTKAIMPVHLFGNAVNMTLIKSLAKKYDLKVIEDCAQATCTMWETSKVGSIGDIGCF
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
SFFPTKNLGAAGDGGAVTTSDKEIAKKIRELAVHGSPIRYHHTQIGYNSRLDTIQAAILN
ECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH
IKIKYISKWINYRQKIANNYLDLLEKNPFISFPKISSDSISHSWNQFVIKLRNDEYSLNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCCH
DFSNLFDTDCKKYYSLRNLVKQQLFEKGINSIIYYPIPIHAQIAYKNKNFSRTKLINTER
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCHHHCCCHHH
ICTEVLSLPMFPEISYEEQVYVAENLNKVLKNCIEEIQISA
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]