| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is mviN [H]
Identifier: 123967820
GI number: 123967820
Start: 260056
End: 261639
Strand: Reverse
Name: mviN [H]
Synonym: A9601_02831
Alternate gene names: 123967820
Gene position: 261639-260056 (Counterclockwise)
Preceding gene: 123967825
Following gene: 123967817
Centisome position: 15.67
GC content: 29.42
Gene sequence:
>1584_bases ATGCATTCATTTTTAAAAAATAATGTTTTTTCAATTTCGTTTGGTACCAGTCTAAGTAAATTAGCTGGATGCATAAGACA AATATTTATAGCTGCTGCTTTTGGGGTTGGCGTAACATACGACGCCTTTAATTATGCTTATATAATTCCTGGTTTTTTGC TAATAATCATTGGGGGTATTAATGGTCCATTGCATAACGCAGTAGTTGCAGTTTTAACTCCGCTTAACAAAAAAAATGGA GGGATTGTTTTAACTCAAGTAAGCATAAAACTTTCAATATTATTATTAATCTTAGCGATATTTATTTATTCGAATTCCAG TTTATTAATTGATTTATTGGCCCCGAATTTAAGTTACGAAACTAAATCTATTGCCACTTACCAATTACAAATACTTACAC CTTGCATCCCTTTGTCCGGCTTCATAGGTTTAAGCTTTGGCGCCTTAAATTCCCAAAGAAAATTCTTTTTATCAAGCATA AGTCCAGCAATAACAAGCGTAACTATTATTTTTTTTATTTTATTTAATTGGATTTTCAACCAAGAAAATACATCTTCTAA TTTTTTTGCTTATTCGGGATTACTCGCATTTGCAACTTTGACAGGAACTTTAATTCAGTTTGTTGTTCAAATTTGGGAAA TAAATAAAATTGGTCTATTGAGATTAGAGTCAACCTTCAATTTATTTAAAGATGAAGAGAGGAGAATTTTCAAACTAATT ATTCCAGCCTCTATCTCATCAGGTCTAAGTCAAATTAATGTTTTTATCGATATGTTTTTCGCTTCAAGTTTTCAAGGCGC AGCATCTGGACTAGCTTACGGAAACTTTCTTATACAAGCCCCCTTAGGGATATTATCTAACTCCTTGATTCTGCCATTAC TTCCAAAATTTTCTAAATTGAGAAGTGAAAAAGACGAAAGAAGTCTCCAAAAAAAATTGATAACTGGGGTAGAGTACTGT TTCTTGACAGCTATTTTTTTAACCGGGTTTTTTATAACATTCAATAATCAAATCGTACAATTAGTTTTTCAAAGAGGATC TTTTGATTATTCAGCAACTTTAAAAGTAAAGAATATATTAATTGCTTATGCAGTTGGCATACCTTTTTATCTTTATAGAG ATTTATTAGTAAGAACTTACTATTCAATTGAAAAAACCAACTTCCCTTTTAAGTCTTCATTTGCAGGGATAATATTTAAT ATTATTTTTGATTGGTTTTTAATTGGTGCCCCAATTAAGAATTTTGGGAATCTTTCTCCTTATAATTTTGGAGTCGTGGG AATAATTTTATCTTCAGTAATAGTAAATCTTATAGTTTGTATTTTTCTTTCTTTCAATTTGCGCAAAGAAAATATCATTT TGCCTAACCTGGAATTATTGAGGAAAATTAGCCTCATGTCATTAGCAACATTTATAGACAGCACAATTTGTTTTACTATT CTCCAAACTACCAATAACTTCAATTCAAATCTCGCGGAATTTTTAATATTAATATTTGGAACTCTAACTTTTTTTGTGAT TTATTTTTTACTTACAAAATGCTTGAAAGTAAATAAATTTAAAGTTTCAAAAAAAATGATTTAA
Upstream 100 bases:
>100_bases TGGATCAAAATCAATTATCCGATCATTCATAAATATGTCGTTAGTTTGAAATCAAATATAATTGAAACTTAAACTGATTG AAAAAATTAGACGAATCCAA
Downstream 100 bases:
>100_bases TTTTTAAAAAAACTTTCCAAAATCTCCTCTAATTCTAGAATTTGTGAGTGAGTGATTAAATTAATGAGTGGAATACTATT AACACCATCACCTACTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MHSFLKNNVFSISFGTSLSKLAGCIRQIFIAAAFGVGVTYDAFNYAYIIPGFLLIIIGGINGPLHNAVVAVLTPLNKKNG GIVLTQVSIKLSILLLILAIFIYSNSSLLIDLLAPNLSYETKSIATYQLQILTPCIPLSGFIGLSFGALNSQRKFFLSSI SPAITSVTIIFFILFNWIFNQENTSSNFFAYSGLLAFATLTGTLIQFVVQIWEINKIGLLRLESTFNLFKDEERRIFKLI IPASISSGLSQINVFIDMFFASSFQGAASGLAYGNFLIQAPLGILSNSLILPLLPKFSKLRSEKDERSLQKKLITGVEYC FLTAIFLTGFFITFNNQIVQLVFQRGSFDYSATLKVKNILIAYAVGIPFYLYRDLLVRTYYSIEKTNFPFKSSFAGIIFN IIFDWFLIGAPIKNFGNLSPYNFGVVGIILSSVIVNLIVCIFLSFNLRKENIILPNLELLRKISLMSLATFIDSTICFTI LQTTNNFNSNLAEFLILIFGTLTFFVIYFLLTKCLKVNKFKVSKKMI
Sequences:
>Translated_527_residues MHSFLKNNVFSISFGTSLSKLAGCIRQIFIAAAFGVGVTYDAFNYAYIIPGFLLIIIGGINGPLHNAVVAVLTPLNKKNG GIVLTQVSIKLSILLLILAIFIYSNSSLLIDLLAPNLSYETKSIATYQLQILTPCIPLSGFIGLSFGALNSQRKFFLSSI SPAITSVTIIFFILFNWIFNQENTSSNFFAYSGLLAFATLTGTLIQFVVQIWEINKIGLLRLESTFNLFKDEERRIFKLI IPASISSGLSQINVFIDMFFASSFQGAASGLAYGNFLIQAPLGILSNSLILPLLPKFSKLRSEKDERSLQKKLITGVEYC FLTAIFLTGFFITFNNQIVQLVFQRGSFDYSATLKVKNILIAYAVGIPFYLYRDLLVRTYYSIEKTNFPFKSSFAGIIFN IIFDWFLIGAPIKNFGNLSPYNFGVVGIILSSVIVNLIVCIFLSFNLRKENIILPNLELLRKISLMSLATFIDSTICFTI LQTTNNFNSNLAEFLILIFGTLTFFVIYFLLTKCLKVNKFKVSKKMI >Mature_527_residues MHSFLKNNVFSISFGTSLSKLAGCIRQIFIAAAFGVGVTYDAFNYAYIIPGFLLIIIGGINGPLHNAVVAVLTPLNKKNG GIVLTQVSIKLSILLLILAIFIYSNSSLLIDLLAPNLSYETKSIATYQLQILTPCIPLSGFIGLSFGALNSQRKFFLSSI SPAITSVTIIFFILFNWIFNQENTSSNFFAYSGLLAFATLTGTLIQFVVQIWEINKIGLLRLESTFNLFKDEERRIFKLI IPASISSGLSQINVFIDMFFASSFQGAASGLAYGNFLIQAPLGILSNSLILPLLPKFSKLRSEKDERSLQKKLITGVEYC FLTAIFLTGFFITFNNQIVQLVFQRGSFDYSATLKVKNILIAYAVGIPFYLYRDLLVRTYYSIEKTNFPFKSSFAGIIFN IIFDWFLIGAPIKNFGNLSPYNFGVVGIILSSVIVNLIVCIFLSFNLRKENIILPNLELLRKISLMSLATFIDSTICFTI LQTTNNFNSNLAEFLILIFGTLTFFVIYFLLTKCLKVNKFKVSKKMI
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=463, Percent_Identity=26.3498920086393, Blast_Score=110, Evalue=2e-25,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 58873; Mature: 58873
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSFLKNNVFSISFGTSLSKLAGCIRQIFIAAAFGVGVTYDAFNYAYIIPGFLLIIIGGI CCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHCCC NGPLHNAVVAVLTPLNKKNGGIVLTQVSIKLSILLLILAIFIYSNSSLLIDLLAPNLSYE CCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC TKSIATYQLQILTPCIPLSGFIGLSFGALNSQRKFFLSSISPAITSVTIIFFILFNWIFN CCCEEEEEEEEECCCCCCCCHHHCEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHC QENTSSNFFAYSGLLAFATLTGTLIQFVVQIWEINKIGLLRLESTFNLFKDEERRIFKLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEEEEE IPASISSGLSQINVFIDMFFASSFQGAASGLAYGNFLIQAPLGILSNSLILPLLPKFSKL ECHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCHHHHCCCCHHHHCCHHHHH RSEKDERSLQKKLITGVEYCFLTAIFLTGFFITFNNQIVQLVFQRGSFDYSATLKVKNIL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHCCCCCCEEEEEHHHHH IAYAVGIPFYLYRDLLVRTYYSIEKTNFPFKSSFAGIIFNIIFDWFLIGAPIKNFGNLSP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC YNFGVVGIILSSVIVNLIVCIFLSFNLRKENIILPNLELLRKISLMSLATFIDSTICFTI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH LQTTNNFNSNLAEFLILIFGTLTFFVIYFLLTKCLKVNKFKVSKKMI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MHSFLKNNVFSISFGTSLSKLAGCIRQIFIAAAFGVGVTYDAFNYAYIIPGFLLIIIGGI CCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHCCC NGPLHNAVVAVLTPLNKKNGGIVLTQVSIKLSILLLILAIFIYSNSSLLIDLLAPNLSYE CCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC TKSIATYQLQILTPCIPLSGFIGLSFGALNSQRKFFLSSISPAITSVTIIFFILFNWIFN CCCEEEEEEEEECCCCCCCCHHHCEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHC QENTSSNFFAYSGLLAFATLTGTLIQFVVQIWEINKIGLLRLESTFNLFKDEERRIFKLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEEEEE IPASISSGLSQINVFIDMFFASSFQGAASGLAYGNFLIQAPLGILSNSLILPLLPKFSKL ECHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCHHHHCCCCHHHHCCHHHHH RSEKDERSLQKKLITGVEYCFLTAIFLTGFFITFNNQIVQLVFQRGSFDYSATLKVKNIL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHCCCCCCEEEEEHHHHH IAYAVGIPFYLYRDLLVRTYYSIEKTNFPFKSSFAGIIFNIIFDWFLIGAPIKNFGNLSP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC YNFGVVGIILSSVIVNLIVCIFLSFNLRKENIILPNLELLRKISLMSLATFIDSTICFTI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH LQTTNNFNSNLAEFLILIFGTLTFFVIYFLLTKCLKVNKFKVSKKMI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]