| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967798
Identifier: 123967798
GI number: 123967798
Start: 243394
End: 244179
Strand: Reverse
Name: 123967798
Synonym: A9601_02611
Alternate gene names: NA
Gene position: 244179-243394 (Counterclockwise)
Preceding gene: 123967800
Following gene: 123967797
Centisome position: 14.62
GC content: 26.84
Gene sequence:
>786_bases TTGATTGAAATTAATACTAAGCGGATTAACATGCTGTCTCATACGATTATTAATATATTTTTAGGCAATAATATAAGGAT GCATAATATTCATAACTATGACAATAGTGAGTTCAAAAGTAACAGTTTGATGTTTAATTATTATGTATTTAAAAAAAAAG TTTTGAACGTTTTTAATCAACTTTCTATTTGGCTATCCTTTCAACTTTCAATAGTTTTCCTTATTGGTATACCTACAACT CTATCCCTCTGGTCAATTAAAAAAAGAAATAAAGCAGTTATTAAACTTCTATCAATGTATTGGAAAATATCCCTTTTATT TTTTATAAGCCTTCTACTTTTAATTGGTAAGTATAATAATGCTCTTGTGATAACAAATATTTCAACATTATTAATCACAG TTTCAGTTTGGTTTTGGAAGGATATTAATGATGAATTAAGAGAATATGATTTTTCTTACTCTCTTACAACAACGACAAAA ATATGGAGATGGACGGTAACTTTTATATCTCTCAATTTTCTAATTCAGAGCTTACTAAACTTTAACTGCTTTTCTTTTAT TAATTCAGATGCATGTGCAATATGGCTTCAGCCTTCTTCAAATTTATATATTTTTATAAAAAATTTATTCAACTTTTTCT TCGGAGCCAACTTTACTCAGCCGATAGCGAAATTTTTAGGATTAATTTCATTATTAATTTATGCTTTAGGCCTTATTCAA TGGTCAATAATCAAATTACCTAAAAATGGAAGAAACTCTTGCTTCTCTCAAAATGGCAGAAATTGA
Upstream 100 bases:
>100_bases CTAAATCGAATAAAAACTCTCCAGCAGCACAGCCTATATCCAAATGAAGATTTAATTTAGAATCACCAAACATTTCACCC AAAGATGGTATTCTCTCAAT
Downstream 100 bases:
>100_bases TTTAATAAATAATCTTGAAAAAATAAGTTCCGAGATACCTAATAGGATAATTAAACTAGAAGGTTTTATTCTAAAAGAAA ATCACAAAGAACAATTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MIEINTKRINMLSHTIINIFLGNNIRMHNIHNYDNSEFKSNSLMFNYYVFKKKVLNVFNQLSIWLSFQLSIVFLIGIPTT LSLWSIKKRNKAVIKLLSMYWKISLLFFISLLLLIGKYNNALVITNISTLLITVSVWFWKDINDELREYDFSYSLTTTTK IWRWTVTFISLNFLIQSLLNFNCFSFINSDACAIWLQPSSNLYIFIKNLFNFFFGANFTQPIAKFLGLISLLIYALGLIQ WSIIKLPKNGRNSCFSQNGRN
Sequences:
>Translated_261_residues MIEINTKRINMLSHTIINIFLGNNIRMHNIHNYDNSEFKSNSLMFNYYVFKKKVLNVFNQLSIWLSFQLSIVFLIGIPTT LSLWSIKKRNKAVIKLLSMYWKISLLFFISLLLLIGKYNNALVITNISTLLITVSVWFWKDINDELREYDFSYSLTTTTK IWRWTVTFISLNFLIQSLLNFNCFSFINSDACAIWLQPSSNLYIFIKNLFNFFFGANFTQPIAKFLGLISLLIYALGLIQ WSIIKLPKNGRNSCFSQNGRN >Mature_261_residues MIEINTKRINMLSHTIINIFLGNNIRMHNIHNYDNSEFKSNSLMFNYYVFKKKVLNVFNQLSIWLSFQLSIVFLIGIPTT LSLWSIKKRNKAVIKLLSMYWKISLLFFISLLLLIGKYNNALVITNISTLLITVSVWFWKDINDELREYDFSYSLTTTTK IWRWTVTFISLNFLIQSLLNFNCFSFINSDACAIWLQPSSNLYIFIKNLFNFFFGANFTQPIAKFLGLISLLIYALGLIQ WSIIKLPKNGRNSCFSQNGRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30590; Mature: 30590
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEINTKRINMLSHTIINIFLGNNIRMHNIHNYDNSEFKSNSLMFNYYVFKKKVLNVFNQ CEEECHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHH LSIWLSFQLSIVFLIGIPTTLSLWSIKKRNKAVIKLLSMYWKISLLFFISLLLLIGKYNN HHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ALVITNISTLLITVSVWFWKDINDELREYDFSYSLTTTTKIWRWTVTFISLNFLIQSLLN EEEEEEHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEHEEEHHHHHHHHHHHHHHHHC FNCFSFINSDACAIWLQPSSNLYIFIKNLFNFFFGANFTQPIAKFLGLISLLIYALGLIQ CHHHHHCCCCCEEEEEECCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH WSIIKLPKNGRNSCFSQNGRN HHEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MIEINTKRINMLSHTIINIFLGNNIRMHNIHNYDNSEFKSNSLMFNYYVFKKKVLNVFNQ CEEECHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHH LSIWLSFQLSIVFLIGIPTTLSLWSIKKRNKAVIKLLSMYWKISLLFFISLLLLIGKYNN HHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ALVITNISTLLITVSVWFWKDINDELREYDFSYSLTTTTKIWRWTVTFISLNFLIQSLLN EEEEEEHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEHEEEHHHHHHHHHHHHHHHHC FNCFSFINSDACAIWLQPSSNLYIFIKNLFNFFFGANFTQPIAKFLGLISLLIYALGLIQ CHHHHHCCCCCEEEEEECCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH WSIIKLPKNGRNSCFSQNGRN HHEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA