| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is eda
Identifier: 123967783
GI number: 123967783
Start: 229148
End: 229774
Strand: Reverse
Name: eda
Synonym: A9601_02461
Alternate gene names: NA
Gene position: 229774-229148 (Counterclockwise)
Preceding gene: 123967784
Following gene: 123967780
Centisome position: 13.76
GC content: 25.04
Gene sequence:
>627_bases ATGAATAATAAAGAAGATTCTTTTTCGGAGTTCCTGAAAACTGAGTCTTTTTTTTTACTTATAAAACCTGAAGATAATAT TTACTCAAATACCTCTATAAGAAATTCATTTTTTGAAGAATTAGAATACTTAGTAAAATTAGGATTAAAGAATATTGAAA TAAGTTGGTCTAACAACGAAAATTGGTTCGATTTTGTATCCGATATTAAAATTAAATATCCAAGAATTAATTTAGGCTCC GCCTCCATAGTTAATAAGCAATCAATAGAAGATTCTTTAAAAATTGGATTAAATTTTTCGATGATGAAATTTTGGGATAA AGATCTTTTCAATTATGCGCAGTCAAAAAGTTATTTATTAATTCCTGGAATTAATAATTTAAAAGATCTTAAGGAAGCGA TAGATTTAAATTGCAAAATTATCAAAATTTACCCAATAAACAGTAAAGATAGTTCGATAGATATACTCAACTATACAAAT ATTGATTTCATTGCTGCTGGAGGACTATCAATCAATGATTTAAAAACTTATAAATCTTTAGGGTATAAAGCAGTCGTAAT TGGAGATAAAGCTATCAAAAATAAAAAATTTGATCCAAAAATATTTGAATGGCTCAAAAATAATTAA
Upstream 100 bases:
>100_bases TGAAAGAGAAACTATAGATACTGAAGATATCCAAGATTTGCTTAACCGCTCAGAAGTAAAAGTCGCAAACTATATTTAAT CGCGAAAGTTTAAATTTTTA
Downstream 100 bases:
>100_bases ATCAAAGATAAATATAATTTATTCAAGAAAAATACTACTTATTTATTAAGTCACATTGAGCATGATTTAGAAGCAAATGA TCAGCAAGTACTAGAGCTAC
Product: 2-keto-3-deoxy-6-phosphogluconate aldolase
Products: pyruvate; D-glyceraldehyde 3-phosphate
Alternate protein names: Aldolase; 2-Keto-3-Deoxy-Phosphogluconate Aldolase; 2-Dehydro-3-Deoxyphosphogluconate Aldolase
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNNKEDSFSEFLKTESFFLLIKPEDNIYSNTSIRNSFFEELEYLVKLGLKNIEISWSNNENWFDFVSDIKIKYPRINLGS ASIVNKQSIEDSLKIGLNFSMMKFWDKDLFNYAQSKSYLLIPGINNLKDLKEAIDLNCKIIKIYPINSKDSSIDILNYTN IDFIAAGGLSINDLKTYKSLGYKAVVIGDKAIKNKKFDPKIFEWLKNN
Sequences:
>Translated_208_residues MNNKEDSFSEFLKTESFFLLIKPEDNIYSNTSIRNSFFEELEYLVKLGLKNIEISWSNNENWFDFVSDIKIKYPRINLGS ASIVNKQSIEDSLKIGLNFSMMKFWDKDLFNYAQSKSYLLIPGINNLKDLKEAIDLNCKIIKIYPINSKDSSIDILNYTN IDFIAAGGLSINDLKTYKSLGYKAVVIGDKAIKNKKFDPKIFEWLKNN >Mature_208_residues MNNKEDSFSEFLKTESFFLLIKPEDNIYSNTSIRNSFFEELEYLVKLGLKNIEISWSNNENWFDFVSDIKIKYPRINLGS ASIVNKQSIEDSLKIGLNFSMMKFWDKDLFNYAQSKSYLLIPGINNLKDLKEAIDLNCKIIKIYPINSKDSSIDILNYTN IDFIAAGGLSINDLKTYKSLGYKAVVIGDKAIKNKKFDPKIFEWLKNN
Specific function: Unknown
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.2.14; 4.1.3.16
Molecular weight: Translated: 24077; Mature: 24077
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKEDSFSEFLKTESFFLLIKPEDNIYSNTSIRNSFFEELEYLVKLGLKNIEISWSNNE CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC NWFDFVSDIKIKYPRINLGSASIVNKQSIEDSLKIGLNFSMMKFWDKDLFNYAQSKSYLL CHHHHHCCCEEECCEEECCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE IPGINNLKDLKEAIDLNCKIIKIYPINSKDSSIDILNYTNIDFIAAGGLSINDLKTYKSL ECCCCCHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHC GYKAVVIGDKAIKNKKFDPKIFEWLKNN CEEEEEECCHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MNNKEDSFSEFLKTESFFLLIKPEDNIYSNTSIRNSFFEELEYLVKLGLKNIEISWSNNE CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC NWFDFVSDIKIKYPRINLGSASIVNKQSIEDSLKIGLNFSMMKFWDKDLFNYAQSKSYLL CHHHHHCCCEEECCEEECCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE IPGINNLKDLKEAIDLNCKIIKIYPINSKDSSIDILNYTNIDFIAAGGLSINDLKTYKSL ECCCCCHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHC GYKAVVIGDKAIKNKKFDPKIFEWLKNN CEEEEEECCHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-dehydro-3-deoxy-D-gluconate 6-phosphate
Specific reaction: 2-dehydro-3-deoxy-D-gluconate 6-phosphate = pyruvate + D-glyceraldehyde 3-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA