| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is aspA
Identifier: 123967779
GI number: 123967779
Start: 225484
End: 226389
Strand: Direct
Name: aspA
Synonym: A9601_02421
Alternate gene names: NA
Gene position: 225484-226389 (Clockwise)
Preceding gene: 123967776
Following gene: 123967781
Centisome position: 13.5
GC content: 31.79
Gene sequence:
>906_bases ATGACTGTTCAAAGAATACTTATCGTTTCAGGCACTCATGGGAATGAAATTAATCCTGTTTGGGCGGTTAAACAATTTAA TAGAGAGGAAAATAGTTTAAAACATGGTATTGAGTATGAATACATCATAGGTAATCCTGTTGCCTATGAAAAAGGGTGCA GATATATAGATGTAGATTTAAATAGATCTTTTAAAGAAAGTGAGAATTGTGATCAACAAAAGAATAGCTTTTATGAAACA AATAGAGCCAATTTTTTGTTAGATGAATTTGGAATTGACGGATCTAAACCCTGTCAAATTGTAATCGATTTGCATACTAC TACTGCAAATATGGGAACTAGTATTGTTTTGTATGGGAGGAGATTCAAAGATTTTTGTTTAGCTGCGTTACTGCAGAACA AATTTGGATTGCCTATTTATTTGCACGAAAAAGATAAAGCTCAAACTGGCTTTCTTGTAGAAGCTTGGCCATGTGGTCTA GTTATTGAAATAGGAGCTGTAGCACAAAATTTTTATGATCCAAAAATCATAGATAGATTCTCTCTAATAATTAGCTCCCT AAGGGAAGAGATAGATAAATTAAAAAATAACCTTATAGAACTCCCAAAGGAATTGGTTGTTTATGTTCATCAAGGAAGCA TAGATTATCCAAGAGATAAAAAAGGAGTTATTGATGGTCTAATTCATCCTGAGAGAATAAATCAAGATTGGAAAATGATT AAAAAAGGAGATCCATTATTTCTTGATAGCCAAGGAATAGTTCACAAATATGACGGAGACCAATTGATTTGGCCTGTTTT TATTGGAGAAGTTGCTTATAAGGAAAAAAATATTGCCATGAGTTACACAAAAAAAGAAGTTATTTGTTCCAAAAAACAAT GGGTTCAAGATTTTGAAAGTCTTTAA
Upstream 100 bases:
>100_bases GCAAAGCCATTCATTAGTTGAGTCCAAAACCAAAACCAGAATTTTTTGGAGGCCATAATAAGGTGTCTATTTTGCATAAA ATTTTATTTTTAAAGAAAAA
Downstream 100 bases:
>100_bases ATTAAGAAACCGGAACAATAAATCATTGAAAACTAATAAGGATTTTTTATTTAATAGATAATTTTATTTAATGTTCAATA CTTTAATTTTTTTTACTAAC
Product: aspartoacylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTVQRILIVSGTHGNEINPVWAVKQFNREENSLKHGIEYEYIIGNPVAYEKGCRYIDVDLNRSFKESENCDQQKNSFYET NRANFLLDEFGIDGSKPCQIVIDLHTTTANMGTSIVLYGRRFKDFCLAALLQNKFGLPIYLHEKDKAQTGFLVEAWPCGL VIEIGAVAQNFYDPKIIDRFSLIISSLREEIDKLKNNLIELPKELVVYVHQGSIDYPRDKKGVIDGLIHPERINQDWKMI KKGDPLFLDSQGIVHKYDGDQLIWPVFIGEVAYKEKNIAMSYTKKEVICSKKQWVQDFESL
Sequences:
>Translated_301_residues MTVQRILIVSGTHGNEINPVWAVKQFNREENSLKHGIEYEYIIGNPVAYEKGCRYIDVDLNRSFKESENCDQQKNSFYET NRANFLLDEFGIDGSKPCQIVIDLHTTTANMGTSIVLYGRRFKDFCLAALLQNKFGLPIYLHEKDKAQTGFLVEAWPCGL VIEIGAVAQNFYDPKIIDRFSLIISSLREEIDKLKNNLIELPKELVVYVHQGSIDYPRDKKGVIDGLIHPERINQDWKMI KKGDPLFLDSQGIVHKYDGDQLIWPVFIGEVAYKEKNIAMSYTKKEVICSKKQWVQDFESL >Mature_300_residues TVQRILIVSGTHGNEINPVWAVKQFNREENSLKHGIEYEYIIGNPVAYEKGCRYIDVDLNRSFKESENCDQQKNSFYETN RANFLLDEFGIDGSKPCQIVIDLHTTTANMGTSIVLYGRRFKDFCLAALLQNKFGLPIYLHEKDKAQTGFLVEAWPCGLV IEIGAVAQNFYDPKIIDRFSLIISSLREEIDKLKNNLIELPKELVVYVHQGSIDYPRDKKGVIDGLIHPERINQDWKMIK KGDPLFLDSQGIVHKYDGDQLIWPVFIGEVAYKEKNIAMSYTKKEVICSKKQWVQDFESL
Specific function: Unknown
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Aspartoacylase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557335, Length=299, Percent_Identity=33.7792642140468, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI189339202, Length=299, Percent_Identity=33.7792642140468, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI18087825, Length=292, Percent_Identity=29.7945205479452, Blast_Score=128, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016708 - InterPro: IPR007036 [H]
Pfam domain/function: PF04952 AstE_AspA [H]
EC number: =3.5.1.15 [H]
Molecular weight: Translated: 34646; Mature: 34515
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQRILIVSGTHGNEINPVWAVKQFNREENSLKHGIEYEYIIGNPVAYEKGCRYIDVDL CCCEEEEEEECCCCCCCCEEHHHHHHCCHHHHHHCCCEEEEEECCCEEHHHCCEEEEEEC NRSFKESENCDQQKNSFYETNRANFLLDEFGIDGSKPCQIVIDLHTTTANMGTSIVLYGR CCCCCCCCCCCHHHHHHHHCCCCCEEEHHHCCCCCCCEEEEEEEEECCCCCCCEEEEECC RFKDFCLAALLQNKFGLPIYLHEKDKAQTGFLVEAWPCGLVIEIGAVAQNFYDPKIIDRF HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCEEEEECHHHHHCCCHHHHHHH SLIISSLREEIDKLKNNLIELPKELVVYVHQGSIDYPRDKKGVIDGLIHPERINQDWKMI HHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCHHHCCCCHHHCCCCHHHH KKGDPLFLDSQGIVHKYDGDQLIWPVFIGEVAYKEKNIAMSYTKKEVICSKKQWVQDFES HCCCCEEEECCCCEEEECCCEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC L C >Mature Secondary Structure TVQRILIVSGTHGNEINPVWAVKQFNREENSLKHGIEYEYIIGNPVAYEKGCRYIDVDL CCEEEEEEECCCCCCCCEEHHHHHHCCHHHHHHCCCEEEEEECCCEEHHHCCEEEEEEC NRSFKESENCDQQKNSFYETNRANFLLDEFGIDGSKPCQIVIDLHTTTANMGTSIVLYGR CCCCCCCCCCCHHHHHHHHCCCCCEEEHHHCCCCCCCEEEEEEEEECCCCCCCEEEEECC RFKDFCLAALLQNKFGLPIYLHEKDKAQTGFLVEAWPCGLVIEIGAVAQNFYDPKIIDRF HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCEEEEECHHHHHCCCHHHHHHH SLIISSLREEIDKLKNNLIELPKELVVYVHQGSIDYPRDKKGVIDGLIHPERINQDWKMI HHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCHHHCCCCHHHCCCCHHHH KKGDPLFLDSQGIVHKYDGDQLIWPVFIGEVAYKEKNIAMSYTKKEVICSKKQWVQDFES HCCCCEEEECCCCEEEECCCEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA