BacMap

Definition	Prochlorococcus marinus str. AS9601, complete genome.
Accession	NC_008816
Length	1,669,886

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The map label for this gene is cbiO1 [H]

Identifier: 123967680

GI number: 123967680

Start: 133236

End: 133910

Strand: Direct

Name: cbiO1 [H]

Synonym: A9601_01431

Alternate gene names: 123967680

Gene position: 133236-133910 (Clockwise)

Preceding gene: 123967679

Following gene: 123967682

Centisome position: 7.98

GC content: 30.07

Gene sequence:

>675_bases
ATGCGAGAATCCTTTGAAAATGAAATACCTCATATAAAATTCAAAGATGTTTCTTTTTCATATCCTGGAGAAAAAGAAAA
TTTAATTTTTAAATGTAACTTTTCAATAAAAAAACCTGGTTTTTGGATGGTGGTAGGTAAAAACGGGAGCGGAAAGAGTA
CTCTCTTAAAATTAATTAATGGAATAGTCAACCCCAAAAATGGTGACATTGTTTCTAATGCAAATATTGGCATGGTGTTT
CAAAACCCTGATCATCAAATATTGATGCCAAATTGTAGGAGTGAACTTTTGATTAATATTAATCAGAATATAAATCAAAA
TGAAATTAATAAAAAAATTGAATATGTGCTTGATCAGGTAGGAATGACTGGTTTTGAAAAAAGGCCAGTTCATACTTTAA
GCGGTGGACAAAAACAACGCTTAAGTATTGCATGTGCTCTGATTAGTAATAGAAATTTTATTCTTTTAGATGAGCCTACA
GCTTTACTTGATCAAACCAGCCAATTAAAAGTTTTACGAACTATTAAAAATCTTACAAGTGACCATAGAAAACCTTTATC
TGCTTTGTGGATTACACATCGTTATGAAGAATTAACTTATGCTGATGCAGTAGCAGAGTTAAAAAATGGTTTTTTATCTA
GTTGGCAAGAACCATCAAAATTTCAATATAATTGA

Upstream 100 bases:

>100_bases
GAGCTAAAGAAATTATTTCTGTTCAGATATATGAAAAATCGTCAGTAGCAGGAGGAGCTAAAAGACCAGGATTTTCTCTC
AATATAGATTGATTGAATTA

Downstream 100 bases:

>100_bases
TCCTTGTACTTGTCATAAGGCACTTTAAAGAGCTAGATTCATCCTATATTCCTCGGTAGCTCAGCGGTAGAGCGATCGAC
TGTTAATCGATTGGTCGCAG

Product: ABC transporter ATP-binding protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRESFENEIPHIKFKDVSFSYPGEKENLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLINGIVNPKNGDIVSNANIGMVF
QNPDHQILMPNCRSELLININQNINQNEINKKIEYVLDQVGMTGFEKRPVHTLSGGQKQRLSIACALISNRNFILLDEPT
ALLDQTSQLKVLRTIKNLTSDHRKPLSALWITHRYEELTYADAVAELKNGFLSSWQEPSKFQYN

Sequences:

>Translated_224_residues
MRESFENEIPHIKFKDVSFSYPGEKENLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLINGIVNPKNGDIVSNANIGMVF
QNPDHQILMPNCRSELLININQNINQNEINKKIEYVLDQVGMTGFEKRPVHTLSGGQKQRLSIACALISNRNFILLDEPT
ALLDQTSQLKVLRTIKNLTSDHRKPLSALWITHRYEELTYADAVAELKNGFLSSWQEPSKFQYN
>Mature_224_residues
MRESFENEIPHIKFKDVSFSYPGEKENLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLINGIVNPKNGDIVSNANIGMVF
QNPDHQILMPNCRSELLININQNINQNEINKKIEYVLDQVGMTGFEKRPVHTLSGGQKQRLSIACALISNRNFILLDEPT
ALLDQTSQLKVLRTIKNLTSDHRKPLSALWITHRYEELTYADAVAELKNGFLSSWQEPSKFQYN

Specific function: Part of the ABC transporter complex CbiONQ involved in cobalt import. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=31.25, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=31.25, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI9961250, Length=224, Percent_Identity=31.25, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI42741659, Length=229, Percent_Identity=28.3842794759825, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI255708477, Length=229, Percent_Identity=28.82096069869, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI148612844, Length=225, Percent_Identity=29.3333333333333, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI171184400, Length=230, Percent_Identity=30, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI31657092, Length=232, Percent_Identity=24.1379310344828, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI27477115, Length=224, Percent_Identity=26.7857142857143, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI47078218, Length=190, Percent_Identity=27.3684210526316, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI45446740, Length=190, Percent_Identity=27.3684210526316, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI21536378, Length=236, Percent_Identity=26.271186440678, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI73747915, Length=225, Percent_Identity=25.7777777777778, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI73747917, Length=186, Percent_Identity=27.9569892473118, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI27881501, Length=193, Percent_Identity=25.3886010362694, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI30795238, Length=193, Percent_Identity=25.3886010362694, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI105990541, Length=184, Percent_Identity=26.6304347826087, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI62526033, Length=232, Percent_Identity=27.1551724137931, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87081791, Length=231, Percent_Identity=28.1385281385281, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1789873, Length=221, Percent_Identity=31.6742081447964, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786398, Length=202, Percent_Identity=29.7029702970297, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=29.4930875576037, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788210, Length=227, Percent_Identity=27.3127753303965, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786563, Length=183, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787164, Length=190, Percent_Identity=30, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1788225, Length=194, Percent_Identity=31.4432989690722, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=26.2910798122066, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787112, Length=216, Percent_Identity=25.9259259259259, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=28.7735849056604, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87081834, Length=211, Percent_Identity=27.4881516587678, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87082267, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790467, Length=215, Percent_Identity=27.4418604651163, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787370, Length=227, Percent_Identity=25.5506607929515, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=28.3720930232558, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787712, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=25.7009345794392, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786253, Length=201, Percent_Identity=25.3731343283582, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788506, Length=193, Percent_Identity=32.1243523316062, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787547, Length=179, Percent_Identity=26.8156424581006, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI145693107, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787500, Length=171, Percent_Identity=28.0701754385965, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI48994943, Length=199, Percent_Identity=27.6381909547739, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=25.8928571428571, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789962, Length=226, Percent_Identity=26.5486725663717, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=23.6842105263158, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994883, Length=211, Percent_Identity=28.9099526066351, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786872, Length=185, Percent_Identity=30.2702702702703, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787105, Length=220, Percent_Identity=25.9090909090909, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI48995001, Length=231, Percent_Identity=23.3766233766234, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1790162, Length=210, Percent_Identity=25.7142857142857, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI87081782, Length=206, Percent_Identity=23.3009708737864, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786319, Length=207, Percent_Identity=27.536231884058, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788165, Length=169, Percent_Identity=28.4023668639053, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=221, Percent_Identity=32.1266968325792, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17565938, Length=234, Percent_Identity=31.1965811965812, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI212646699, Length=223, Percent_Identity=30.0448430493274, Blast_Score=85, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17543740, Length=234, Percent_Identity=30.7692307692308, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI25146777, Length=220, Percent_Identity=29.0909090909091, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI193208177, Length=223, Percent_Identity=28.2511210762332, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17541710, Length=227, Percent_Identity=29.5154185022026, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17510237, Length=161, Percent_Identity=32.2981366459627, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI115535101, Length=231, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193211015, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17567269, Length=232, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=225, Percent_Identity=28, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17569081, Length=207, Percent_Identity=28.0193236714976, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=224, Percent_Identity=29.9107142857143, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567265, Length=233, Percent_Identity=26.1802575107296, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17559834, Length=175, Percent_Identity=31.4285714285714, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=28.0701754385965, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=237, Percent_Identity=26.5822784810127, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=184, Percent_Identity=27.1739130434783, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17555318, Length=162, Percent_Identity=34.5679012345679, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI86564969, Length=216, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71992066, Length=216, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71992070, Length=216, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25146765, Length=216, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=226, Percent_Identity=28.3185840707965, Blast_Score=64, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=231, Percent_Identity=31.1688311688312, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6324985, Length=236, Percent_Identity=32.6271186440678, Blast_Score=79, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6320874, Length=162, Percent_Identity=32.7160493827161, Blast_Score=74, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322640, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=171, Percent_Identity=28.6549707602339, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320296, Length=202, Percent_Identity=27.2277227722772, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI23397593, Length=230, Percent_Identity=29.1304347826087, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI85726357, Length=226, Percent_Identity=29.2035398230088, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17136662, Length=227, Percent_Identity=29.9559471365639, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281363262, Length=235, Percent_Identity=29.7872340425532, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24653245, Length=235, Percent_Identity=29.7872340425532, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574533, Length=193, Percent_Identity=32.6424870466321, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI221500365, Length=178, Percent_Identity=26.4044943820225, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI116007184, Length=178, Percent_Identity=26.4044943820225, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28574744, Length=174, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24659289, Length=221, Percent_Identity=25.3393665158371, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666836, Length=160, Percent_Identity=32.5, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581191, Length=169, Percent_Identity=28.9940828402367, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581189, Length=169, Percent_Identity=28.9940828402367, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581193, Length=169, Percent_Identity=28.9940828402367, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581195, Length=169, Percent_Identity=28.9940828402367, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28574150, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI116007328, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648314, Length=180, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015856
- InterPro:   IPR003593
- InterPro:   IPR022112 [H]

Pfam domain/function: PF00005 ABC_tran; PF12370 CoABC_C [H]

EC number: NA

Molecular weight: Translated: 25511; Mature: 25511

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESFENEIPHIKFKDVSFSYPGEKENLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLIN
CCCCCHHCCCEEEEECCEEECCCCCCCEEEEEECEECCCCEEEEEECCCCCHHHHHHHHH
GIVNPKNGDIVSNANIGMVFQNPDHQILMPNCRSELLININQNINQNEINKKIEYVLDQV
HHCCCCCCCEEECCCEEEEEECCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GMTGFEKRPVHTLSGGQKQRLSIACALISNRNFILLDEPTALLDQTSQLKVLRTIKNLTS
CCCCCCCCCCCCCCCCCCHHEEEEEEEECCCCEEEEECCHHHHCCHHHHHHHHHHHHHHH
DHRKPLSALWITHRYEELTYADAVAELKNGFLSSWQEPSKFQYN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRESFENEIPHIKFKDVSFSYPGEKENLIFKCNFSIKKPGFWMVVGKNGSGKSTLLKLIN
CCCCCHHCCCEEEEECCEEECCCCCCCEEEEEECEECCCCEEEEEECCCCCHHHHHHHHH
GIVNPKNGDIVSNANIGMVFQNPDHQILMPNCRSELLININQNINQNEINKKIEYVLDQV
HHCCCCCCCEEECCCEEEEEECCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
GMTGFEKRPVHTLSGGQKQRLSIACALISNRNFILLDEPTALLDQTSQLKVLRTIKNLTS
CCCCCCCCCCCCCCCCCCHHEEEEEEEECCCCEEEEECCHHHHCCHHHHHHHHHHHHHHH
DHRKPLSALWITHRYEELTYADAVAELKNGFLSSWQEPSKFQYN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA