| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967679
Identifier: 123967679
GI number: 123967679
Start: 132949
End: 133227
Strand: Direct
Name: 123967679
Synonym: A9601_01421
Alternate gene names: NA
Gene position: 132949-133227 (Clockwise)
Preceding gene: 123967676
Following gene: 123967680
Centisome position: 7.96
GC content: 30.47
Gene sequence:
>279_bases ATGTTTATGTATTCGTTGGAACTAAGTCTGAGATATTCACCTTTTCCACTTTCAATTCAGAAGAAAGAAATTGATGATGT TAAAAGAATTTATGAAGAAATAAAAAGTTCTATGAATGAAACTTTAGAATCCTCAAACTTGATCGAATTAAGGTGTGACA AAGTGCAAGATAAAGTAATTGCTGTAAGAGCTAAAGAAATTATTTCTGTTCAGATATATGAAAAATCGTCAGTAGCAGGA GGAGCTAAAAGACCAGGATTTTCTCTCAATATAGATTGA
Upstream 100 bases:
>100_bases ATTGTATTTAATGTTCTTTTATATAATTTTCTCAAAATAATTTAATTTTAATAACTTCCTGCGGAAAAAATATTTAGTAA TATAAGAGGTAGCTTTAATT
Downstream 100 bases:
>100_bases TTGAATTAATGCGAGAATCCTTTGAAAATGAAATACCTCATATAAAATTCAAAGATGTTTCTTTTTCATATCCTGGAGAA AAAGAAAATTTAATTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MFMYSLELSLRYSPFPLSIQKKEIDDVKRIYEEIKSSMNETLESSNLIELRCDKVQDKVIAVRAKEIISVQIYEKSSVAG GAKRPGFSLNID
Sequences:
>Translated_92_residues MFMYSLELSLRYSPFPLSIQKKEIDDVKRIYEEIKSSMNETLESSNLIELRCDKVQDKVIAVRAKEIISVQIYEKSSVAG GAKRPGFSLNID >Mature_92_residues MFMYSLELSLRYSPFPLSIQKKEIDDVKRIYEEIKSSMNETLESSNLIELRCDKVQDKVIAVRAKEIISVQIYEKSSVAG GAKRPGFSLNID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0367 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020885 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10532; Mature: 10532
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMYSLELSLRYSPFPLSIQKKEIDDVKRIYEEIKSSMNETLESSNLIELRCDKVQDKVI CEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH AVRAKEIISVQIYEKSSVAGGAKRPGFSLNID EEEECCEEEEEEEECCCCCCCCCCCCEEEECC >Mature Secondary Structure MFMYSLELSLRYSPFPLSIQKKEIDDVKRIYEEIKSSMNETLESSNLIELRCDKVQDKVI CEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH AVRAKEIISVQIYEKSSVAGGAKRPGFSLNID EEEECCEEEEEEEECCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA