| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967669
Identifier: 123967669
GI number: 123967669
Start: 125554
End: 126024
Strand: Reverse
Name: 123967669
Synonym: A9601_01321
Alternate gene names: NA
Gene position: 126024-125554 (Counterclockwise)
Preceding gene: 123967670
Following gene: 123967665
Centisome position: 7.55
GC content: 33.55
Gene sequence:
>471_bases ATGGGTACTTGGCTAAAACATGACGTTATAACAATTGTTAATGCGCCTCTTGAAAATGTATGGGATACATGGAGCGATTT AGACTCAATGTCACTTTGGATGAGCTGGATTGAATCTGTAAAAACAGTTGACGAAGAAACTAATACGTTACCAGATTTAA CAGAATGGACTTTAGCTGCAAATGGCTTTAGGTTTAAATGGAAAGCTCAAATTACAGAAAGGGTTGAAAAAAGCAAACTC AAATGGAAATCAATAGGAGGTTTACCAACTGAGGGATCAGTAGTTTTCGAAAGTAAAACTGATCAAATCACTACGGTCAA TTTAGCCATAACTTATGAACTACCAAAAATGATTGCTCGGTTTATGGAAGAAAATATTTTAGGCAAAATGGTTACAAACG AATTACAGGCCAATATTGATAGGTTCAAAGATTTAGTTGAAAAGAACTATACAAAAAATTTTTCTAACTAA
Upstream 100 bases:
>100_bases AGACTCTATGGAGGGAGCTACAATGAGTGGTCATTTAGCTGCCGCCGCAATTTTAGAGAAGAAAGCCGAATTAGCAAAAA ATCTTGCAGTAAGTTAATTC
Downstream 100 bases:
>100_bases AAATATTAATTGCTACATCTAGTAGTCCTTCAAAAGTATATTTTTGTGCCTGACTATCAAATCTTCCAAAAATCTTGTTA CATATTTTTGTTGTCTGAGG
Product: putative integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Streptomyces Cyclase/Dehydrase Superfamily; Involved In Polyketide Synthesis; Streptomyces Cyclase/Dehydrase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MGTWLKHDVITIVNAPLENVWDTWSDLDSMSLWMSWIESVKTVDEETNTLPDLTEWTLAANGFRFKWKAQITERVEKSKL KWKSIGGLPTEGSVVFESKTDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKDLVEKNYTKNFSN
Sequences:
>Translated_156_residues MGTWLKHDVITIVNAPLENVWDTWSDLDSMSLWMSWIESVKTVDEETNTLPDLTEWTLAANGFRFKWKAQITERVEKSKL KWKSIGGLPTEGSVVFESKTDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKDLVEKNYTKNFSN >Mature_155_residues GTWLKHDVITIVNAPLENVWDTWSDLDSMSLWMSWIESVKTVDEETNTLPDLTEWTLAANGFRFKWKAQITERVEKSKLK WKSIGGLPTEGSVVFESKTDQITTVNLAITYELPKMIARFMEENILGKMVTNELQANIDRFKDLVEKNYTKNFSN
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18067; Mature: 17936
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTWLKHDVITIVNAPLENVWDTWSDLDSMSLWMSWIESVKTVDEETNTLPDLTEWTLAA CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC NGFRFKWKAQITERVEKSKLKWKSIGGLPTEGSVVFESKTDQITTVNLAITYELPKMIAR CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEEEHHHHHHHH FMEENILGKMVTNELQANIDRFKDLVEKNYTKNFSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GTWLKHDVITIVNAPLENVWDTWSDLDSMSLWMSWIESVKTVDEETNTLPDLTEWTLAA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC NGFRFKWKAQITERVEKSKLKWKSIGGLPTEGSVVFESKTDQITTVNLAITYELPKMIAR CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEEEHHHHHHHH FMEENILGKMVTNELQANIDRFKDLVEKNYTKNFSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA