| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123967663
Identifier: 123967663
GI number: 123967663
Start: 122702
End: 123409
Strand: Direct
Name: 123967663
Synonym: A9601_01261
Alternate gene names: NA
Gene position: 122702-123409 (Clockwise)
Preceding gene: 123967661
Following gene: 123967666
Centisome position: 7.35
GC content: 29.66
Gene sequence:
>708_bases ATGAAGATTCTTCTTGGATTAGTTCTTTGCTTGATTTTTCAAGTAATTTTTTTAGAAAGTTCTTTTGCTTTTGTCGATTC TAATGTACGAGAGTTTTTGGAAAATCGTGTAAATCAATGGCCAGAACTATATTTACCAAATTTTAAATTGTCGGATACTT CTGAGGACTTAATATATCCTAAATGGTTCGAAGGGAATTGGCTTGTCACTTCTCAAGATATAATTAATAATTCAGAAGAG CCAGTTATTTATAAAGTAAATTTCTTTAAGAATGATTCAGATTTAGTTGTTGGTAATCGTGCAAAAAATTCTGAATCTAT TGGAAAAGCAATATTTGGTGATACCTTAATCAAGGTTGTAAATGATCCTCAATCTATTAATAATCAAATTACCTATTTAA AAGATGATTTTTATATCGATTCAAGAATTACAGGGAGAAATCAGATCCAAGACGATGATATTTTTTTCGCAGATGAGCTT GTTATACAAACTGCACATAAGCCAGGTGCTTCAAGGATTAATCAGGTAGAGACCATTAGTAAATTTCAAAAATGTTCCGA AGAAATATTGGATGTTGATAATTCAATGAAACCATCAATATGTGGAGTGCAATATGTTGCTTCTTATGGTTCAAAAGTTG GTGATCCTTCTATTCATGCTATAAAAACAAATAAATATAAATTGACATTTGAATTTATTGAGAGTTAG
Upstream 100 bases:
>100_bases TAACCATAAAATTGCTTCTTGCTTTGGTACAATTTTTTCTTTTGAATCTGGCTCTAATAATACATAATGATCTGATGCTC TTATTAGTGGATTTGACATA
Downstream 100 bases:
>100_bases CACTAAATAGATATTCCTCTAAGTTGTTCCTCCAAATGAAAAGATTTTCTAAATAAGGGTTGTTTATATATTCTTGGCTC CCCTCTCCTGAAAGAATTGG
Product: POLO box duplicated region
Products: NA
Alternate protein names: Polo Box Duplicated Region; POLO Box Duplicated Region-Like
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKILLGLVLCLIFQVIFLESSFAFVDSNVREFLENRVNQWPELYLPNFKLSDTSEDLIYPKWFEGNWLVTSQDIINNSEE PVIYKVNFFKNDSDLVVGNRAKNSESIGKAIFGDTLIKVVNDPQSINNQITYLKDDFYIDSRITGRNQIQDDDIFFADEL VIQTAHKPGASRINQVETISKFQKCSEEILDVDNSMKPSICGVQYVASYGSKVGDPSIHAIKTNKYKLTFEFIES
Sequences:
>Translated_235_residues MKILLGLVLCLIFQVIFLESSFAFVDSNVREFLENRVNQWPELYLPNFKLSDTSEDLIYPKWFEGNWLVTSQDIINNSEE PVIYKVNFFKNDSDLVVGNRAKNSESIGKAIFGDTLIKVVNDPQSINNQITYLKDDFYIDSRITGRNQIQDDDIFFADEL VIQTAHKPGASRINQVETISKFQKCSEEILDVDNSMKPSICGVQYVASYGSKVGDPSIHAIKTNKYKLTFEFIES >Mature_235_residues MKILLGLVLCLIFQVIFLESSFAFVDSNVREFLENRVNQWPELYLPNFKLSDTSEDLIYPKWFEGNWLVTSQDIINNSEE PVIYKVNFFKNDSDLVVGNRAKNSESIGKAIFGDTLIKVVNDPQSINNQITYLKDDFYIDSRITGRNQIQDDDIFFADEL VIQTAHKPGASRINQVETISKFQKCSEEILDVDNSMKPSICGVQYVASYGSKVGDPSIHAIKTNKYKLTFEFIES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26863; Mature: 26863
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLGLVLCLIFQVIFLESSFAFVDSNVREFLENRVNQWPELYLPNFKLSDTSEDLIYP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCC KWFEGNWLVTSQDIINNSEEPVIYKVNFFKNDSDLVVGNRAKNSESIGKAIFGDTLIKVV EEECCCEEEECHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH NDPQSINNQITYLKDDFYIDSRITGRNQIQDDDIFFADELVIQTAHKPGASRINQVETIS CCCHHHCCCEEEEECCEEEECCCCCCCCCCCCCEEEHHHHHHEECCCCCHHHHHHHHHHH KFQKCSEEILDVDNSMKPSICGVQYVASYGSKVGDPSIHAIKTNKYKLTFEFIES HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECC >Mature Secondary Structure MKILLGLVLCLIFQVIFLESSFAFVDSNVREFLENRVNQWPELYLPNFKLSDTSEDLIYP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCC KWFEGNWLVTSQDIINNSEEPVIYKVNFFKNDSDLVVGNRAKNSESIGKAIFGDTLIKVV EEECCCEEEECHHHHCCCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH NDPQSINNQITYLKDDFYIDSRITGRNQIQDDDIFFADELVIQTAHKPGASRINQVETIS CCCHHHCCCEEEEECCEEEECCCCCCCCCCCCCEEEHHHHHHEECCCCCHHHHHHHHHHH KFQKCSEEILDVDNSMKPSICGVQYVASYGSKVGDPSIHAIKTNKYKLTFEFIES HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA