| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is pgm [H]
Identifier: 123967626
GI number: 123967626
Start: 92366
End: 94003
Strand: Direct
Name: pgm [H]
Synonym: A9601_00891
Alternate gene names: 123967626
Gene position: 92366-94003 (Clockwise)
Preceding gene: 123967625
Following gene: 123967627
Centisome position: 5.53
GC content: 33.09
Gene sequence:
>1638_bases ATGAATCAAGTTAGTGTAATTAATATTAATTCTCCTTTTTTAGATCAAAAACCAGGTACTTCTGGATTAAGAAAAAGTAC TTTAAAGTTTCAGGAAGAACATTATCTAGAAGTTTTTATTGAAGCAATTTTACAATCATTAGGAGATTTAAAAGGTTCAA CATTAGTAGTTGGTGGTGATGGCAGATATGGCAATATTGAAGCAATAGAAAAAATTGTCCAAATATGCATTGCTCATAAA GTTCAAAAGGTTATTGTTCCAAGATACGGATTATTATCTACTCCTGCGACCTCACATTTAATTAGAAAAGAAAACGCTAT AGGTGGAATTATTCTTTCTGCAAGCCATAATCCTGGTGGGATTGATGGCGACTTTGGAGTGAAATTGAATATCTCGAATG GTGGTCCAGCTCCTGAGATAATTACTAATAAGATTTTTAAGTCTTCACAATTACTAACAAGTTATAAAATTTGTAAAATT CAATTACCTGATTTTAGTAAATATGGTACTTATCATTACGACGAAACTACCTTAGAAATTATTGATGGATTAACAGATTA TTCTAATTTGATGGAGAAAATTTTTGACTTTGACCAAATTAGTGATTTTTTAAAAAAAGACTTCTCGTTAATCTTTGATG CAATGAATGCGGTTACAGGTCCATATGCAAAAAATATTTTTGTTGAAAAAATGGGTCTTGCACCAGATTGTGTCATGAAT GGTAACCCGTTAAAAGATTTTGGAGGTTTACATCCTGATCCTAATCTTACTTACGCATCCCACTTGGCTGATTTGTTACT AAATAAAAAATCTTATAGTTTTGGTGCTGCATGCGATGGAGATGGAGATAGGAATATGATTTTAGGAAGTGGATGTTTTG TAAATCCTAGTGATAGCCTTGCAGTTATCACTGCTAACACAAAATGTGTACCTGGTTATAAAGATGGTATTACAGGTGTG GCACGATCCATGCCAACCAGCTCAGCGGTTGATAATGTCGCGCGAGCATTAAATATACCTTGTTTCGAGACACCTACTGG CTGGAAGTTTTTTGGTAATCTTTTAGATTCTAATTTAATTACTTTATGTGGAGAAGAAAGTTTCGGAACAGGTAGTAATC ATGTGAGAGAAAAAGATGGACTATGGGCAGTGTTGTATTGGTTACAAGTTTTAGCTGAGAAAAAATGTTCGGTAAGTGAT TTGATGCAGAATCATTGGAAACAATTTGGTAGGAATTATTATTCAAGACATGATTATGAGGCAATTTCCTCAAATATTGC TAATCAAATCTTTGGTAATCTAACTTCTTTACTCGAAAATTTAAAAGGAAATAGTTTTGCTGGCCATTTAGTTAAAGTTG CAGATAACTTTTCATATTTAGATCCCGTTGATAATTCCATAAGTGAAAATCAAGGTTTAAGATTGGTCCTTGATGATAAT TCTCGAGTAATTGTGCGCCTTTCTGGAACTGGAACTAAGGGTGCAACATTAAGACTTTACTTTGAGAAGTTTTTCGATCC TCAACAGAATCTTTCGTTAAATCCTCAGATCGCTTTGAAACCTCTAATAGATGATTTAGACGCTTTATTGAACATTTCAA AACTTACTCAAATGGAAAATCCTACAGTAATTACATAG
Upstream 100 bases:
>100_bases TAGTGCATTATTAATTTCTTCATTATGGTTTATCGCTATGTTAAGAACTTCCGAAATGCCTCATTAATTTAGTTAGATTT TTGAAAGTTTTCTTAAAAAT
Downstream 100 bases:
>100_bases AATTGAAAGTAATAATTTTTTGATTTTATTTATATGCATTCAGAAAATTTATTTACTAATTATTCTCAAATAGAAAACAA TGCACCTTTGGCAGATAAAT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MNQVSVININSPFLDQKPGTSGLRKSTLKFQEEHYLEVFIEAILQSLGDLKGSTLVVGGDGRYGNIEAIEKIVQICIAHK VQKVIVPRYGLLSTPATSHLIRKENAIGGIILSASHNPGGIDGDFGVKLNISNGGPAPEIITNKIFKSSQLLTSYKICKI QLPDFSKYGTYHYDETTLEIIDGLTDYSNLMEKIFDFDQISDFLKKDFSLIFDAMNAVTGPYAKNIFVEKMGLAPDCVMN GNPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSLAVITANTKCVPGYKDGITGV ARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLITLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKKCSVSD LMQNHWKQFGRNYYSRHDYEAISSNIANQIFGNLTSLLENLKGNSFAGHLVKVADNFSYLDPVDNSISENQGLRLVLDDN SRVIVRLSGTGTKGATLRLYFEKFFDPQQNLSLNPQIALKPLIDDLDALLNISKLTQMENPTVIT
Sequences:
>Translated_545_residues MNQVSVININSPFLDQKPGTSGLRKSTLKFQEEHYLEVFIEAILQSLGDLKGSTLVVGGDGRYGNIEAIEKIVQICIAHK VQKVIVPRYGLLSTPATSHLIRKENAIGGIILSASHNPGGIDGDFGVKLNISNGGPAPEIITNKIFKSSQLLTSYKICKI QLPDFSKYGTYHYDETTLEIIDGLTDYSNLMEKIFDFDQISDFLKKDFSLIFDAMNAVTGPYAKNIFVEKMGLAPDCVMN GNPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSLAVITANTKCVPGYKDGITGV ARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLITLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKKCSVSD LMQNHWKQFGRNYYSRHDYEAISSNIANQIFGNLTSLLENLKGNSFAGHLVKVADNFSYLDPVDNSISENQGLRLVLDDN SRVIVRLSGTGTKGATLRLYFEKFFDPQQNLSLNPQIALKPLIDDLDALLNISKLTQMENPTVIT >Mature_545_residues MNQVSVININSPFLDQKPGTSGLRKSTLKFQEEHYLEVFIEAILQSLGDLKGSTLVVGGDGRYGNIEAIEKIVQICIAHK VQKVIVPRYGLLSTPATSHLIRKENAIGGIILSASHNPGGIDGDFGVKLNISNGGPAPEIITNKIFKSSQLLTSYKICKI QLPDFSKYGTYHYDETTLEIIDGLTDYSNLMEKIFDFDQISDFLKKDFSLIFDAMNAVTGPYAKNIFVEKMGLAPDCVMN GNPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSLAVITANTKCVPGYKDGITGV ARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLITLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKKCSVSD LMQNHWKQFGRNYYSRHDYEAISSNIANQIFGNLTSLLENLKGNSFAGHLVKVADNFSYLDPVDNSISENQGLRLVLDDN SRVIVRLSGTGTKGATLRLYFEKFFDPQQNLSLNPQIALKPLIDDLDALLNISKLTQMENPTVIT
Specific function: This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=557, Percent_Identity=50.8078994614004, Blast_Score=549, Evalue=1e-156, Organism=Homo sapiens, GI21361621, Length=564, Percent_Identity=48.5815602836879, Blast_Score=532, Evalue=1e-151, Organism=Homo sapiens, GI133922562, Length=556, Percent_Identity=45.5035971223022, Blast_Score=485, Evalue=1e-137, Organism=Homo sapiens, GI290463104, Length=368, Percent_Identity=50.2717391304348, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI239743670, Length=114, Percent_Identity=44.7368421052632, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI239741729, Length=114, Percent_Identity=46.4912280701754, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535441, Length=558, Percent_Identity=47.8494623655914, Blast_Score=501, Evalue=1e-142, Organism=Saccharomyces cerevisiae, GI6323752, Length=562, Percent_Identity=47.153024911032, Blast_Score=490, Evalue=1e-139, Organism=Saccharomyces cerevisiae, GI6322722, Length=561, Percent_Identity=46.8805704099822, Blast_Score=479, Evalue=1e-136, Organism=Drosophila melanogaster, GI17864244, Length=557, Percent_Identity=48.6535008976661, Blast_Score=523, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59842; Mature: 59842
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQVSVININSPFLDQKPGTSGLRKSTLKFQEEHYLEVFIEAILQSLGDLKGSTLVVGGD CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC GRYGNIEAIEKIVQICIAHKVQKVIVPRYGLLSTPATSHLIRKENAIGGIILSASHNPGG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCC IDGDFGVKLNISNGGPAPEIITNKIFKSSQLLTSYKICKIQLPDFSKYGTYHYDETTLEI CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHCCCEECCCHHHHH IDGLTDYSNLMEKIFDFDQISDFLKKDFSLIFDAMNAVTGPYAKNIFVEKMGLAPDCVMN HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEC GNPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSL CCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCE AVITANTKCVPGYKDGITGVARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLI EEEEECCEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEE TLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKKCSVSDLMQNHWKQFGRNYYSRHDYE EEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH AISSNIANQIFGNLTSLLENLKGNSFAGHLVKVADNFSYLDPVDNSISENQGLRLVLDDN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCEEEEEECC SRVIVRLSGTGTKGATLRLYFEKFFDPQQNLSLNPQIALKPLIDDLDALLNISKLTQMEN CEEEEEEECCCCCCCEEEEEHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC PTVIT CCCCC >Mature Secondary Structure MNQVSVININSPFLDQKPGTSGLRKSTLKFQEEHYLEVFIEAILQSLGDLKGSTLVVGGD CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC GRYGNIEAIEKIVQICIAHKVQKVIVPRYGLLSTPATSHLIRKENAIGGIILSASHNPGG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCC IDGDFGVKLNISNGGPAPEIITNKIFKSSQLLTSYKICKIQLPDFSKYGTYHYDETTLEI CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHCCCEECCCHHHHH IDGLTDYSNLMEKIFDFDQISDFLKKDFSLIFDAMNAVTGPYAKNIFVEKMGLAPDCVMN HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEC GNPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSL CCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCE AVITANTKCVPGYKDGITGVARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLI EEEEECCEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEE TLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKKCSVSDLMQNHWKQFGRNYYSRHDYE EEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH AISSNIANQIFGNLTSLLENLKGNSFAGHLVKVADNFSYLDPVDNSISENQGLRLVLDDN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCEEEEEECC SRVIVRLSGTGTKGATLRLYFEKFFDPQQNLSLNPQIALKPLIDDLDALLNISKLTQMEN CEEEEEEECCCCCCCEEEEEHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC PTVIT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7959036; 2307661 [H]