| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is hit [C]
Identifier: 123967616
GI number: 123967616
Start: 82647
End: 82988
Strand: Reverse
Name: hit [C]
Synonym: A9601_00791
Alternate gene names: 123967616
Gene position: 82988-82647 (Counterclockwise)
Preceding gene: 123967617
Following gene: 123967615
Centisome position: 4.97
GC content: 28.95
Gene sequence:
>342_bases ATGACTGAAACAACAATATTTCAAAAAATCATTAATGAAGAAATACCCTGCGATAAGCTTTATGAAGATAAGTTTTGTAT TGCTTTTAATGATATCCAGGCACAAGCACCAGTTCATTTTTTAGTGATTCCAAAAAAGCCAATTATAAGTTTATTAGATT GTATTGAAGAGGATGTAAATTTATTAGGGCATTTACTTTATGTGGGTAGCAAAATAGCTAAATCAAAAAATTTAACTAAT TGGAGAACAGTAATTAATACTGGAGCAGAATCAGGACAAACAGTTTTTCATTTACATATTCATTTTTTATCTGGAAGAAA AATGAATTGGCCTCCAGGTTAA
Upstream 100 bases:
>100_bases ATATTATTTGTAGATAGAGTTACATCAAAAGATGATTTGAACAAAGAACTTTTAAAAGAAGGGTTTAACGAAAAAGACGT TATCTCAATTAATTAATTTA
Downstream 100 bases:
>100_bases AACTCTCGAAAGAAATGTTAATGGGTTATAAATAAGTAAAAACAAAATGAATACCCCAGATTCCCTAAATACAGAATCCA AAAATTTATTCAATTTAATC
Product: HIT (histidine triad) family protein
Products: NA
Alternate protein names: ORF 1 [H]
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTETTIFQKIINEEIPCDKLYEDKFCIAFNDIQAQAPVHFLVIPKKPIISLLDCIEEDVNLLGHLLYVGSKIAKSKNLTN WRTVINTGAESGQTVFHLHIHFLSGRKMNWPPG
Sequences:
>Translated_113_residues MTETTIFQKIINEEIPCDKLYEDKFCIAFNDIQAQAPVHFLVIPKKPIISLLDCIEEDVNLLGHLLYVGSKIAKSKNLTN WRTVINTGAESGQTVFHLHIHFLSGRKMNWPPG >Mature_112_residues TETTIFQKIINEEIPCDKLYEDKFCIAFNDIQAQAPVHFLVIPKKPIISLLDCIEEDVNLLGHLLYVGSKIAKSKNLTNW RTVINTGAESGQTVFHLHIHFLSGRKMNWPPG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=53.6363636363636, Blast_Score=131, Evalue=1e-31, Organism=Homo sapiens, GI4885413, Length=110, Percent_Identity=51.8181818181818, Blast_Score=123, Evalue=4e-29, Organism=Escherichia coli, GI1787346, Length=111, Percent_Identity=41.4414414414414, Blast_Score=88, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17506713, Length=110, Percent_Identity=47.2727272727273, Blast_Score=120, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6320078, Length=112, Percent_Identity=36.6071428571429, Blast_Score=62, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581222, Length=113, Percent_Identity=53.9823008849557, Blast_Score=137, Evalue=2e-33, Organism=Drosophila melanogaster, GI28574010, Length=113, Percent_Identity=53.9823008849557, Blast_Score=137, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 12848; Mature: 12717
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETTIFQKIINEEIPCDKLYEDKFCIAFNDIQAQAPVHFLVIPKKPIISLLDCIEEDVN CCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHH LLGHLLYVGSKIAKSKNLTNWRTVINTGAESGQTVFHLHIHFLSGRKMNWPPG HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCC >Mature Secondary Structure TETTIFQKIINEEIPCDKLYEDKFCIAFNDIQAQAPVHFLVIPKKPIISLLDCIEEDVN CHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHH LLGHLLYVGSKIAKSKNLTNWRTVINTGAESGQTVFHLHIHFLSGRKMNWPPG HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2108129; 1472710 [H]