| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967576
Identifier: 123967576
GI number: 123967576
Start: 39277
End: 39876
Strand: Direct
Name: 123967576
Synonym: A9601_00391
Alternate gene names: NA
Gene position: 39277-39876 (Clockwise)
Preceding gene: 123967575
Following gene: 123967577
Centisome position: 2.35
GC content: 29.83
Gene sequence:
>600_bases TTGAAAAATTCTGAAAGAAAAATAACTAATCATCTTCAACAAGATATAGTCAAAGTATCTGGTAAAACAATTTTTATTAA TCCTTTTTTATATTGGCGCAGATTTGACGAAAACACTAATAGATGGCTAAGAGAACCTGGTCAAATGTCAGAGGATCAAA TTTCACCAAATAGAAACCGTTTTTATCCAGAAATAGAGTGGGCTGATTTAAGTCATGAGCAAAAGCTAATAAAAGATGCA ACTGTTGAGATGTTTTTAAAAACTCTTGAATTGATAAGTACATTTCATCCTTATCTTAGTTCTGGACAATTATTAGAAGT GGAAAGAAAAATGGCGATTATAAAAAAGATTCCTTTCGAAAAGTGGGTAACAAAATCTTTCGCCAAAAAAGCGAGATTGT TAGAAAAAGAAAAAAGACAATTTAAAAGAGAGAGATTTTTTAGTAGCTGGAGGGAATGGTTTAGTCTTGACAATACTCAA CAAGCGATTTTTCCGTTAATCGTCACGATATTTATTTCTTCATTTATTGGATGGTCTTTAGGGATATCAAAAAGTAGTTG TAATCCTTATTTTGAACAAAATATAGATCAATTAAATTAA
Upstream 100 bases:
>100_bases GGCAGTTATCCGTAACTTAATATTCATAGGATAATTTTTCATATTTCTGGAAAAATAGCGAATAAAAGATAATCTTTAAT TAGATTATTAATTTATACTT
Downstream 100 bases:
>100_bases TTTGTTTTCGATATTTTTTTAGTTTCTAAGTTAATAATATTTTGAAAAAATAAATTTCTTATTTAAAATTATATTAACTT ACATAACTGTTTAAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKNSERKITNHLQQDIVKVSGKTIFINPFLYWRRFDENTNRWLREPGQMSEDQISPNRNRFYPEIEWADLSHEQKLIKDA TVEMFLKTLELISTFHPYLSSGQLLEVERKMAIIKKIPFEKWVTKSFAKKARLLEKEKRQFKRERFFSSWREWFSLDNTQ QAIFPLIVTIFISSFIGWSLGISKSSCNPYFEQNIDQLN
Sequences:
>Translated_199_residues MKNSERKITNHLQQDIVKVSGKTIFINPFLYWRRFDENTNRWLREPGQMSEDQISPNRNRFYPEIEWADLSHEQKLIKDA TVEMFLKTLELISTFHPYLSSGQLLEVERKMAIIKKIPFEKWVTKSFAKKARLLEKEKRQFKRERFFSSWREWFSLDNTQ QAIFPLIVTIFISSFIGWSLGISKSSCNPYFEQNIDQLN >Mature_199_residues MKNSERKITNHLQQDIVKVSGKTIFINPFLYWRRFDENTNRWLREPGQMSEDQISPNRNRFYPEIEWADLSHEQKLIKDA TVEMFLKTLELISTFHPYLSSGQLLEVERKMAIIKKIPFEKWVTKSFAKKARLLEKEKRQFKRERFFSSWREWFSLDNTQ QAIFPLIVTIFISSFIGWSLGISKSSCNPYFEQNIDQLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23893; Mature: 23893
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSERKITNHLQQDIVKVSGKTIFINPFLYWRRFDENTNRWLREPGQMSEDQISPNRNR CCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC FYPEIEWADLSHEQKLIKDATVEMFLKTLELISTFHPYLSSGQLLEVERKMAIIKKIPFE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH KWVTKSFAKKARLLEKEKRQFKRERFFSSWREWFSLDNTQQAIFPLIVTIFISSFIGWSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GISKSSCNPYFEQNIDQLN CCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MKNSERKITNHLQQDIVKVSGKTIFINPFLYWRRFDENTNRWLREPGQMSEDQISPNRNR CCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCC FYPEIEWADLSHEQKLIKDATVEMFLKTLELISTFHPYLSSGQLLEVERKMAIIKKIPFE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH KWVTKSFAKKARLLEKEKRQFKRERFFSSWREWFSLDNTQQAIFPLIVTIFISSFIGWSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GISKSSCNPYFEQNIDQLN CCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA