| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is cydC [H]
Identifier: 121999195
GI number: 121999195
Start: 2652531
End: 2654198
Strand: Reverse
Name: cydC [H]
Synonym: Hhal_2417
Alternate gene names: 121999195
Gene position: 2654198-2652531 (Counterclockwise)
Preceding gene: 121999196
Following gene: 121999194
Centisome position: 99.09
GC content: 74.34
Gene sequence:
>1668_bases GTGCGTGAACTGATGCCCTTCCTGCGCGATCTGCGCCCGGAGTGCTGGCGCCTGGCCCTCGGCACGCTGCTGCTGATCGT CAGCCTTGCGGCCAGCATCGGCCTGATGGGGCTTTCCGGCTGGTTCATCACCGCCACCGCGGTCGCCGGGCTGACCGGGG CCTACCTGGACATCTACCGGCCGAGCGCCGGCATCCGCTTCTTCGCCCTGGCGCGGTCGATTTCCCGTTACTTCGAGCGC CTGGTCCACCACGATGCGGTCCTGCGCACCCTGGCGCGCCTGCGCGGCTGGCTGTTCCGAACCCTGGCGCCGCTGCCTCT GGCCCGCGTCGGCCGGCTGCGCCGCAGCGACCTGCTCAATCGCATGACCGCCGACGTCGAGGCCCTGGACAACCTCTACC TGCGGATCATCGGCCCGAGCCTGGCCGCCGTGGTGACCTTGGGGGGGACCATCGCCGTGCTGGTCCTGCTGGCTGGTCCG GCGGGGCTGGCGGTCGGAGCGGTGCTGCTGGCCGGTGGGATTCTCCTGCCGCTGTGGGCCTGGCGTCGCGGTTCGCCGCA CGGCGAGGCGGTGGACCGGCACCTGCCGGCCCTGCGCGGGGCCGGTGTCGATGCCGTCCAGGGGCTGGCCGAGTTGCGGG CCTGCGGTGCGGTGGGCCGCCACGAGCAGCGCCTGATGGCGGCCGCTGATGGCCTCGCGGCGGCGCGGGCCCGGGCGGCC CGCCTGACCGGGGCCGGCGAGGGGGCGGTGGGACTGCTCGCCCACGGTGCGCTGCTCGCGGCGCTGGTGGTCGGTATCCC GCTCTACCAGGCCGAGGCCATCAGCGGTCCGCTGCTGGCGCTGGTGGCCCTCGCCGCCCTGGCCGGTGGCGAGGCGCTGA CTGCGCTGCCGGGGGCGTGGCAGCACCTGGGTCGCACCCGGGCCGCGGCACGCCGCCTGCTCGAGCACGCCGATACCGCC GCCGACGAATCCGCGGCGGTGGTGGATCCGCCCCCCCGCCAGGCCCTCGGCCTAGCCCTGGCGGGGGTCACGTTTCGCCA CGCGGCGCATACGCCCCCGGTCCTCCGTGATGGCTCGCTGACCGTCGCCCCGGGCGAGACGGTGGTGATCCACGGTCCTT CCGGCTGCGGCAAGTCGACCCTGCTCGATCTCGTGGCGGGCTTGATCCGGCCCGATGCCGGGACGGTCACCCTGGAGGGG GTCCCCGTCCACGCCCTGGCCGAGGCGGAGCGTTTTGCGCGCATCACCTACCTGACCCAGCGCACCGAACTCTTCGCCGA CAGCGTTGCCGGCAACCTGCGCATCGTCGATCCCCGGGCGGACGAGGCCCGCATGTGGCAGGCGCTGCACACCGTCGGCC TCGACGAACGGGTGCGTAGCGCCCCGCGGGGCCTCGACGAGTGGGTCGGGGAGGGGGGCGGACGCCTCTCCGGCGGCGAG GCGCGGCGGCTGGCCCTGGCTCGTCTGGTGCTGACCGACGCCCCGGTAGTCCTTCTCGACGAGCCCTTCCGCGGACTCGA CGATGCCACGGCCGCCGAGGTCGCCCGGCGGCTGGCGCCATGGCTGGCCGAGCGCACCGCGCTCATCATCAGCCACGACC CGGACAGCGCCCCGCCGCACGATCGGCGCCTGCCGTTCTTCGAACTTATCGCCCCTGGCGGCGAATAA
Upstream 100 bases:
>100_bases GGTCGGCGCACGGTGCTGATGGTCGCCCACGACCGAGACACCCACGACTGGGGGGATCGCCACCTGGTGATCGAGGCCGG CCGCTGCGTGGAGGATCGCC
Downstream 100 bases:
>100_bases TCCGCCCTCCGGCTTGGCATTTTGCCCGGCGCGGCGGGATAATACCGGGCTTTTCCTGACCCGAGCGGAGACCCTCCATG AAGCGACACGTGGCCAGTCT
Product: ABC transporter transmembrane region, type 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MRELMPFLRDLRPECWRLALGTLLLIVSLAASIGLMGLSGWFITATAVAGLTGAYLDIYRPSAGIRFFALARSISRYFER LVHHDAVLRTLARLRGWLFRTLAPLPLARVGRLRRSDLLNRMTADVEALDNLYLRIIGPSLAAVVTLGGTIAVLVLLAGP AGLAVGAVLLAGGILLPLWAWRRGSPHGEAVDRHLPALRGAGVDAVQGLAELRACGAVGRHEQRLMAAADGLAAARARAA RLTGAGEGAVGLLAHGALLAALVVGIPLYQAEAISGPLLALVALAALAGGEALTALPGAWQHLGRTRAAARRLLEHADTA ADESAAVVDPPPRQALGLALAGVTFRHAAHTPPVLRDGSLTVAPGETVVIHGPSGCGKSTLLDLVAGLIRPDAGTVTLEG VPVHALAEAERFARITYLTQRTELFADSVAGNLRIVDPRADEARMWQALHTVGLDERVRSAPRGLDEWVGEGGGRLSGGE ARRLALARLVLTDAPVVLLDEPFRGLDDATAAEVARRLAPWLAERTALIISHDPDSAPPHDRRLPFFELIAPGGE
Sequences:
>Translated_555_residues MRELMPFLRDLRPECWRLALGTLLLIVSLAASIGLMGLSGWFITATAVAGLTGAYLDIYRPSAGIRFFALARSISRYFER LVHHDAVLRTLARLRGWLFRTLAPLPLARVGRLRRSDLLNRMTADVEALDNLYLRIIGPSLAAVVTLGGTIAVLVLLAGP AGLAVGAVLLAGGILLPLWAWRRGSPHGEAVDRHLPALRGAGVDAVQGLAELRACGAVGRHEQRLMAAADGLAAARARAA RLTGAGEGAVGLLAHGALLAALVVGIPLYQAEAISGPLLALVALAALAGGEALTALPGAWQHLGRTRAAARRLLEHADTA ADESAAVVDPPPRQALGLALAGVTFRHAAHTPPVLRDGSLTVAPGETVVIHGPSGCGKSTLLDLVAGLIRPDAGTVTLEG VPVHALAEAERFARITYLTQRTELFADSVAGNLRIVDPRADEARMWQALHTVGLDERVRSAPRGLDEWVGEGGGRLSGGE ARRLALARLVLTDAPVVLLDEPFRGLDDATAAEVARRLAPWLAERTALIISHDPDSAPPHDRRLPFFELIAPGGE >Mature_555_residues MRELMPFLRDLRPECWRLALGTLLLIVSLAASIGLMGLSGWFITATAVAGLTGAYLDIYRPSAGIRFFALARSISRYFER LVHHDAVLRTLARLRGWLFRTLAPLPLARVGRLRRSDLLNRMTADVEALDNLYLRIIGPSLAAVVTLGGTIAVLVLLAGP AGLAVGAVLLAGGILLPLWAWRRGSPHGEAVDRHLPALRGAGVDAVQGLAELRACGAVGRHEQRLMAAADGLAAARARAA RLTGAGEGAVGLLAHGALLAALVVGIPLYQAEAISGPLLALVALAALAGGEALTALPGAWQHLGRTRAAARRLLEHADTA ADESAAVVDPPPRQALGLALAGVTFRHAAHTPPVLRDGSLTVAPGETVVIHGPSGCGKSTLLDLVAGLIRPDAGTVTLEG VPVHALAEAERFARITYLTQRTELFADSVAGNLRIVDPRADEARMWQALHTVGLDERVRSAPRGLDEWVGEGGGRLSGGE ARRLALARLVLTDAPVVLLDEPFRGLDDATAAEVARRLAPWLAERTALIISHDPDSAPPHDRRLPFFELIAPGGE
Specific function: Somehow involved in the cytochrome D branch of aerobic respiration. Seems to be a component of a transport system [H]
COG id: COG4987
COG function: function code CO; ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI156105685, Length=466, Percent_Identity=25.7510729613734, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI9955966, Length=454, Percent_Identity=24.0088105726872, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI45243524, Length=454, Percent_Identity=24.0088105726872, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI42741659, Length=452, Percent_Identity=24.7787610619469, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI9955963, Length=235, Percent_Identity=29.7872340425532, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI171184400, Length=451, Percent_Identity=24.8337028824834, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI9961250, Length=197, Percent_Identity=30.4568527918782, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI4505771, Length=197, Percent_Identity=30.4568527918782, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI9961252, Length=197, Percent_Identity=30.4568527918782, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI73747915, Length=467, Percent_Identity=25.2676659528908, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI255708477, Length=453, Percent_Identity=22.075055187638, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI21536378, Length=468, Percent_Identity=23.9316239316239, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI21729873, Length=452, Percent_Identity=23.6725663716814, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI15149474, Length=452, Percent_Identity=23.6725663716814, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI42490749, Length=200, Percent_Identity=32, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI73747917, Length=455, Percent_Identity=25.0549450549451, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI9955968, Length=189, Percent_Identity=29.6296296296296, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI148612844, Length=359, Percent_Identity=26.1838440111421, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI110832839, Length=189, Percent_Identity=29.6296296296296, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI110832837, Length=197, Percent_Identity=28.4263959390863, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI110832835, Length=189, Percent_Identity=29.6296296296296, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI134142340, Length=458, Percent_Identity=23.7991266375546, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI134142345, Length=458, Percent_Identity=23.7991266375546, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI134142342, Length=458, Percent_Identity=23.7991266375546, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI134142337, Length=458, Percent_Identity=23.7991266375546, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI89111135, Length=199, Percent_Identity=29.6482412060301, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI66529005, Length=570, Percent_Identity=21.5789473684211, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI90421313, Length=461, Percent_Identity=22.3427331887202, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI157502201, Length=512, Percent_Identity=22.65625, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI190343023, Length=412, Percent_Identity=26.4563106796117, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI157502203, Length=194, Percent_Identity=30.4123711340206, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI118582255, Length=438, Percent_Identity=23.2876712328767, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI4557481, Length=436, Percent_Identity=22.2477064220184, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI9955970, Length=253, Percent_Identity=26.8774703557312, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI9665248, Length=281, Percent_Identity=24.9110320284698, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI25914749, Length=210, Percent_Identity=32.3809523809524, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI21729876, Length=206, Percent_Identity=27.6699029126214, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI134142335, Length=208, Percent_Identity=24.5192307692308, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1787112, Length=539, Percent_Identity=37.4768089053803, Blast_Score=309, Evalue=3e-85, Organism=Escherichia coli, GI1786653, Length=531, Percent_Identity=24.6704331450094, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1786654, Length=530, Percent_Identity=24.3396226415094, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI1787143, Length=468, Percent_Identity=23.5042735042735, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1786253, Length=184, Percent_Identity=35.3260869565217, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1786698, Length=195, Percent_Identity=31.2820512820513, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1789032, Length=196, Percent_Identity=34.1836734693878, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI87081709, Length=215, Percent_Identity=32.5581395348837, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI87081834, Length=215, Percent_Identity=32.5581395348837, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788761, Length=201, Percent_Identity=31.3432835820896, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788225, Length=201, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786563, Length=192, Percent_Identity=32.8125, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1787113, Length=423, Percent_Identity=25.2955082742317, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI87082267, Length=212, Percent_Identity=32.0754716981132, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=30.9090909090909, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87081791, Length=192, Percent_Identity=32.8125, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1787370, Length=209, Percent_Identity=29.1866028708134, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1787105, Length=203, Percent_Identity=30.5418719211823, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789891, Length=203, Percent_Identity=31.0344827586207, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789873, Length=206, Percent_Identity=33.0097087378641, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790739, Length=200, Percent_Identity=30, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788450, Length=204, Percent_Identity=30.3921568627451, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786398, Length=219, Percent_Identity=31.0502283105023, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI2367384, Length=238, Percent_Identity=32.7731092436975, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789593, Length=174, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1790162, Length=198, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790467, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786703, Length=208, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1787712, Length=202, Percent_Identity=29.2079207920792, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87081782, Length=177, Percent_Identity=29.3785310734463, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17533971, Length=457, Percent_Identity=25.382932166302, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17511077, Length=477, Percent_Identity=23.0607966457023, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI115535101, Length=229, Percent_Identity=31.8777292576419, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI115533592, Length=462, Percent_Identity=27.7056277056277, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17567269, Length=212, Percent_Identity=32.0754716981132, Blast_Score=112, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71992290, Length=292, Percent_Identity=26.7123287671233, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17558664, Length=349, Percent_Identity=25.5014326647564, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71996550, Length=188, Percent_Identity=34.5744680851064, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17565938, Length=252, Percent_Identity=26.5873015873016, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71992285, Length=195, Percent_Identity=30.7692307692308, Blast_Score=106, Evalue=4e-23, Organism=Caenorhabditis elegans, GI193202349, Length=370, Percent_Identity=27.027027027027, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17567265, Length=207, Percent_Identity=32.3671497584541, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI212646699, Length=417, Percent_Identity=23.7410071942446, Blast_Score=101, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17543740, Length=182, Percent_Identity=30.2197802197802, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17569081, Length=448, Percent_Identity=24.7767857142857, Blast_Score=99, Evalue=7e-21, Organism=Caenorhabditis elegans, GI71996809, Length=342, Percent_Identity=24.8538011695906, Blast_Score=99, Evalue=8e-21, Organism=Caenorhabditis elegans, GI193211015, Length=198, Percent_Identity=28.2828282828283, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI193211017, Length=198, Percent_Identity=28.2828282828283, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI25146777, Length=448, Percent_Identity=22.3214285714286, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71984940, Length=347, Percent_Identity=23.6311239193084, Blast_Score=96, Evalue=7e-20, Organism=Caenorhabditis elegans, GI25146765, Length=460, Percent_Identity=23.4782608695652, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71992070, Length=460, Percent_Identity=23.695652173913, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71992066, Length=460, Percent_Identity=25, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17541710, Length=180, Percent_Identity=30, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI86564969, Length=461, Percent_Identity=24.5119305856833, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI32563727, Length=422, Percent_Identity=22.5118483412322, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17569145, Length=206, Percent_Identity=27.1844660194175, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71988343, Length=452, Percent_Identity=22.787610619469, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17556528, Length=444, Percent_Identity=22.2972972972973, Blast_Score=89, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17569143, Length=203, Percent_Identity=29.5566502463054, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17551700, Length=207, Percent_Identity=29.4685990338164, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17551702, Length=207, Percent_Identity=29.4685990338164, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193209708, Length=217, Percent_Identity=29.4930875576037, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193208177, Length=355, Percent_Identity=25.3521126760563, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71992080, Length=212, Percent_Identity=29.7169811320755, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193209740, Length=199, Percent_Identity=27.1356783919598, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115534520, Length=292, Percent_Identity=23.972602739726, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI32566680, Length=205, Percent_Identity=28.780487804878, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17567243, Length=466, Percent_Identity=21.4592274678112, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17510237, Length=256, Percent_Identity=25, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71983523, Length=193, Percent_Identity=31.0880829015544, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71983516, Length=193, Percent_Identity=31.0880829015544, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71983510, Length=193, Percent_Identity=31.0880829015544, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=308, Percent_Identity=28.8961038961039, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6322640, Length=215, Percent_Identity=28.8372093023256, Blast_Score=100, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6320339, Length=450, Percent_Identity=25.1111111111111, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6322980, Length=464, Percent_Identity=21.7672413793103, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323959, Length=204, Percent_Identity=28.921568627451, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6321752, Length=222, Percent_Identity=28.3783783783784, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321720, Length=456, Percent_Identity=24.5614035087719, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6324985, Length=519, Percent_Identity=22.7360308285164, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322957, Length=258, Percent_Identity=25.1937984496124, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323014, Length=492, Percent_Identity=20.3252032520325, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641565, Length=459, Percent_Identity=27.4509803921569, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI28574259, Length=557, Percent_Identity=24.4165170556553, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI21357907, Length=292, Percent_Identity=30.1369863013699, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653245, Length=472, Percent_Identity=23.9406779661017, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI281363262, Length=273, Percent_Identity=28.9377289377289, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI85726357, Length=215, Percent_Identity=32.093023255814, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI17136662, Length=478, Percent_Identity=22.8033472803347, Blast_Score=102, Evalue=9e-22, Organism=Drosophila melanogaster, GI24650986, Length=501, Percent_Identity=24.3512974051896, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI21358185, Length=501, Percent_Identity=24.3512974051896, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI23397593, Length=474, Percent_Identity=24.2616033755274, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24585091, Length=497, Percent_Identity=23.3400402414487, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI24659289, Length=232, Percent_Identity=31.0344827586207, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI62484234, Length=497, Percent_Identity=23.7424547283702, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI45552347, Length=525, Percent_Identity=24, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI45552337, Length=525, Percent_Identity=24, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24585557, Length=527, Percent_Identity=22.2011385199241, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI45552437, Length=527, Percent_Identity=22.2011385199241, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24648279, Length=512, Percent_Identity=22.265625, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24649703, Length=482, Percent_Identity=24.4813278008299, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI45552361, Length=530, Percent_Identity=24.1509433962264, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI45552349, Length=530, Percent_Identity=24.1509433962264, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI45552343, Length=516, Percent_Identity=23.2558139534884, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI45552363, Length=516, Percent_Identity=23.2558139534884, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI161077321, Length=246, Percent_Identity=27.2357723577236, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI45552345, Length=516, Percent_Identity=23.4496124031008, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI21357851, Length=208, Percent_Identity=28.3653846153846, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI45552335, Length=516, Percent_Identity=23.4496124031008, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI45551501, Length=196, Percent_Identity=29.0816326530612, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI45551502, Length=196, Percent_Identity=29.0816326530612, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI281361582, Length=480, Percent_Identity=23.75, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI45552351, Length=472, Percent_Identity=23.728813559322, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI45552339, Length=472, Percent_Identity=23.728813559322, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550390, Length=544, Percent_Identity=21.5073529411765, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI221460257, Length=179, Percent_Identity=31.2849162011173, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI45552357, Length=467, Percent_Identity=24.1970021413276, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI45552355, Length=467, Percent_Identity=24.1970021413276, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI45552341, Length=189, Percent_Identity=30.1587301587302, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552353, Length=189, Percent_Identity=30.1587301587302, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24583969, Length=189, Percent_Identity=30.1587301587302, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552359, Length=189, Percent_Identity=30.1587301587302, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI45550972, Length=189, Percent_Identity=30.1587301587302, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI19920928, Length=472, Percent_Identity=25.2118644067797, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI161078426, Length=189, Percent_Identity=30.1587301587302, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI221474134, Length=203, Percent_Identity=27.0935960591133, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI85724864, Length=225, Percent_Identity=28.4444444444444, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24580555, Length=225, Percent_Identity=28.4444444444444, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI85816269, Length=225, Percent_Identity=28.4444444444444, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24580553, Length=225, Percent_Identity=28.4444444444444, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24581407, Length=264, Percent_Identity=29.5454545454545, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552199, Length=264, Percent_Identity=29.5454545454545, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI17136592, Length=223, Percent_Identity=29.5964125560538, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI19920532, Length=173, Percent_Identity=28.9017341040462, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI24580930, Length=173, Percent_Identity=28.9017341040462, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014223 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017940 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 [H]
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 58452; Mature: 58452
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00178 AA_TRNA_LIGASE_I ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELMPFLRDLRPECWRLALGTLLLIVSLAASIGLMGLSGWFITATAVAGLTGAYLDIYR CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEC PSAGIRFFALARSISRYFERLVHHDAVLRTLARLRGWLFRTLAPLPLARVGRLRRSDLLN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RMTADVEALDNLYLRIIGPSLAAVVTLGGTIAVLVLLAGPAGLAVGAVLLAGGILLPLWA HHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH WRRGSPHGEAVDRHLPALRGAGVDAVQGLAELRACGAVGRHEQRLMAAADGLAAARARAA HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RLTGAGEGAVGLLAHGALLAALVVGIPLYQAEAISGPLLALVALAALAGGEALTALPGAW HHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCHHH QHLGRTRAAARRLLEHADTAADESAAVVDPPPRQALGLALAGVTFRHAAHTPPVLRDGSL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCE TVAPGETVVIHGPSGCGKSTLLDLVAGLIRPDAGTVTLEGVPVHALAEAERFARITYLTQ EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH RTELFADSVAGNLRIVDPRADEARMWQALHTVGLDERVRSAPRGLDEWVGEGGGRLSGGE HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCH ARRLALARLVLTDAPVVLLDEPFRGLDDATAAEVARRLAPWLAERTALIISHDPDSAPPH HHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC DRRLPFFELIAPGGE CCCCCHHHEECCCCC >Mature Secondary Structure MRELMPFLRDLRPECWRLALGTLLLIVSLAASIGLMGLSGWFITATAVAGLTGAYLDIYR CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEC PSAGIRFFALARSISRYFERLVHHDAVLRTLARLRGWLFRTLAPLPLARVGRLRRSDLLN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RMTADVEALDNLYLRIIGPSLAAVVTLGGTIAVLVLLAGPAGLAVGAVLLAGGILLPLWA HHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH WRRGSPHGEAVDRHLPALRGAGVDAVQGLAELRACGAVGRHEQRLMAAADGLAAARARAA HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RLTGAGEGAVGLLAHGALLAALVVGIPLYQAEAISGPLLALVALAALAGGEALTALPGAW HHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCHHH QHLGRTRAAARRLLEHADTAADESAAVVDPPPRQALGLALAGVTFRHAAHTPPVLRDGSL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCE TVAPGETVVIHGPSGCGKSTLLDLVAGLIRPDAGTVTLEGVPVHALAEAERFARITYLTQ EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH RTELFADSVAGNLRIVDPRADEARMWQALHTVGLDERVRSAPRGLDEWVGEGGGRLSGGE HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCH ARRLALARLVLTDAPVVLLDEPFRGLDDATAAEVARRLAPWLAERTALIISHDPDSAPPH HHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC DRRLPFFELIAPGGE CCCCCHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8331068; 8276245; 8905232; 9278503; 7934832; 1909328 [H]