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The map label for this gene is yrdA [H]

Identifier: 121999173

GI number: 121999173

Start: 2631774

End: 2632304

Strand: Reverse

Name: yrdA [H]

Synonym: Hhal_2395

Alternate gene names: 121999173

Gene position: 2632304-2631774 (Counterclockwise)

Preceding gene: 121999174

Following gene: 121999169

Centisome position: 98.28

GC content: 70.06

Gene sequence:

>531_bases
ATGATCCGCGAATTCGGAGGCATTCGCCCGCAGTTGGGGCCCGGCGCCTGGGTCGACGCCACGGCCCTGGTCATCGGCGA
TGTGAGCCTGCACGAGGAGGTCTCGGTCTGGCCTACCGCCGTGCTGCGGGGGGACGTTCACCGCATCGAGGTCGGGGCAC
GGACCAATATCCAGGACGGCGCGGTGGTCCACGTCGCCCACGACGGCCCCTATAGCCCGGGGGGGTTCCCGGCGCTGATC
GGCGCCGAGGTCACCGTCGGCCACAAGGCCGTGATCCACGCCTGTCGGGTCGGGGACCACTGCCTGGTGGGGATCGGTTC
GGTGATCCTCGACGGCGCCGTGGTCGGCCCAGAGAGCATCATTGGCGCCGGCGCCCTAGTGCCGCCGGGCAAGGAGCTGG
AGGGCGGCTACCTCTACCTGGGCAACCCCGCCAAGCCGGTGCGCGAGCTTACTGATCAGGAGCGCGAGCACCTGCGCTAC
TCCGCCAACCACTACGTGGGCCTGAAAGAGCGACACCGCGGCAGCGCCTAG

Upstream 100 bases:

>100_bases
GTGCGCATGGGGGCCACCAAGGCCGATTTCGACAACACAGTGGCCATCCACCCCACCAGCGCCGAAGAACTGGTCACCCT
GTGAGCGCAAGGGAGCCGAC

Downstream 100 bases:

>100_bases
GCCACCGCGGTGTCGGTCCAGCGACTCCGGCGGTGCGAGCCGGGACCGCCGCGGCGGTCCCGGCTCGCGGCTGGTCAGCC
GAGCAGCCCGAGGCTGTTGG

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MIREFGGIRPQLGPGAWVDATALVIGDVSLHEEVSVWPTAVLRGDVHRIEVGARTNIQDGAVVHVAHDGPYSPGGFPALI
GAEVTVGHKAVIHACRVGDHCLVGIGSVILDGAVVGPESIIGAGALVPPGKELEGGYLYLGNPAKPVRELTDQEREHLRY
SANHYVGLKERHRGSA

Sequences:

>Translated_176_residues
MIREFGGIRPQLGPGAWVDATALVIGDVSLHEEVSVWPTAVLRGDVHRIEVGARTNIQDGAVVHVAHDGPYSPGGFPALI
GAEVTVGHKAVIHACRVGDHCLVGIGSVILDGAVVGPESIIGAGALVPPGKELEGGYLYLGNPAKPVRELTDQEREHLRY
SANHYVGLKERHRGSA
>Mature_176_residues
MIREFGGIRPQLGPGAWVDATALVIGDVSLHEEVSVWPTAVLRGDVHRIEVGARTNIQDGAVVHVAHDGPYSPGGFPALI
GAEVTVGHKAVIHACRVGDHCLVGIGSVILDGAVVGPESIIGAGALVPPGKELEGGYLYLGNPAKPVRELTDQEREHLRY
SANHYVGLKERHRGSA

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=172, Percent_Identity=51.1627906976744, Blast_Score=197, Evalue=4e-52,
Organism=Escherichia coli, GI1787667, Length=177, Percent_Identity=37.8531073446328, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI87081681, Length=167, Percent_Identity=38.9221556886228, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18522; Mature: 18522

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIREFGGIRPQLGPGAWVDATALVIGDVSLHEEVSVWPTAVLRGDVHRIEVGARTNIQDG
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCC
AVVHVAHDGPYSPGGFPALIGAEVTVGHKAVIHACRVGDHCLVGIGSVILDGAVVGPESI
EEEEEECCCCCCCCCCCEEECCEEEECHHHHHHHHHCCCCCEEHHHHHHHCCCEECHHHH
IGAGALVPPGKELEGGYLYLGNPAKPVRELTDQEREHLRYSANHYVGLKERHRGSA
HCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCHHHCCCCC
>Mature Secondary Structure
MIREFGGIRPQLGPGAWVDATALVIGDVSLHEEVSVWPTAVLRGDVHRIEVGARTNIQDG
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCC
AVVHVAHDGPYSPGGFPALIGAEVTVGHKAVIHACRVGDHCLVGIGSVILDGAVVGPESI
EEEEEECCCCCCCCCCCEEECCEEEECHHHHHHHHHCCCCCEEHHHHHHHCCCEECHHHH
IGAGALVPPGKELEGGYLYLGNPAKPVRELTDQEREHLRYSANHYVGLKERHRGSA
HCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]