| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121999159
Identifier: 121999159
GI number: 121999159
Start: 2617898
End: 2618845
Strand: Reverse
Name: 121999159
Synonym: Hhal_2381
Alternate gene names: NA
Gene position: 2618845-2617898 (Counterclockwise)
Preceding gene: 121999164
Following gene: 121999158
Centisome position: 97.77
GC content: 65.72
Gene sequence:
>948_bases TTGTTCGCGCAAAGACTGATCCGGCGTCTGATGCCGTTTGGGTGCGCTGCGGCCTGTTTCGCATTGCTGGTGATCGCCCC GGTGGCTGGGGGTGAGGACCTTGATCCCGAACAGCTCGAGGAGCTCGTCGAGGAGGTGCGTGGTCTCTCACCGGTTGTGG CCGAGCGCCGTGCCGAGGATCTGCGCGCCCACATCGGCCGCATGGAGGAGACGCCCCACGCCGTGGGGTCCGATCCACGC ACACCAGCGGGCCAGACGCGAGAGGATGGCAACTACTGCTACCAGTGTCACGGCGACGGCTGGGAGCACTTCTTCGAGAT CGGCGAAGACGTGAGCACCAGCCAGGCCAACGAGACGTGCCTGGACTGCCACAGCGGCGGGGACCGCATGCACTGGGATG GTGGCGCTCACGAGTTCCAGGACATGGCCTGCGTCGACTGCCACAACATGCACAGCAACAACGACACCCTGCTCCGCGAG GAGGATCAGCTGACGCTGTGCAGCAGTTGCCACCAGGAGCGTCGGGTGGACTTCAACCGGCCGCACCACCATCCGGTCCG GGAAGGCCAGGTGGAGTGCACGGACTGCCACAACCCCCACGGCACCACTGGCCACGCGATGCTCCGCGGCGGGGGGGTGA ATGAGACCTGCCATAACTGCCACGCGGAGTATCGGGGACCGTTCCTCTGGGAGCACCAGCCGGTGGCCGAAGACTGCACC CATTGCCACAACCCGCACGGCTCGATCCACCCGAACATGCTGGAGGCGCGCACGGCCCAGCTTTGCCAGTCCTGTCACGT CACCACAGGTCATCCCGGTGATTTGCTTGGGCCGGATCACGAAGGCCTGTCGCAGGGGCAGTTCATGACACGGGGGCAGG GCTGTACCAACTGCCACTCCGAGGTTCACGGCTCCAATCACCCGGGCGGCGCCTTCTTCAAGCGCTGA
Upstream 100 bases:
>100_bases CGTATGACGGGGCCGTTACGCCGGTCGGCCCATTTTGGCCCGCCTTTTGCCTCCCGGCGTTGATAACAATCAAAACTCCA TCGATAGGGAGGAGCGCGCC
Downstream 100 bases:
>100_bases GCTCTGCAATCACGGCGAGGGCGCGAGAACCATGACTCGAACCACCACCAAATTGGGAAGCTCACTGGCGCTATCGGCGA CGGCATTATTCATCGTGGCC
Product: cytochrome C family protein
Products: NA
Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Decaheme Cytochrome C; Nitrate/TMAO Reductase; Doubled CXXCH Domain-Containing Protein; Multiheme Cytochrome; Multiheme C-Type Cytochrome; Cytochrome; Lipoprotein Cytochrome C; Decaheme Cytochrome C MtrD; Multiheme Cytochrome Family Protein; Double CXXCH Motif-Containing Protein; Cytochrome C; Cytochrome C-Type Protein NrfB
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MFAQRLIRRLMPFGCAAACFALLVIAPVAGGEDLDPEQLEELVEEVRGLSPVVAERRAEDLRAHIGRMEETPHAVGSDPR TPAGQTREDGNYCYQCHGDGWEHFFEIGEDVSTSQANETCLDCHSGGDRMHWDGGAHEFQDMACVDCHNMHSNNDTLLRE EDQLTLCSSCHQERRVDFNRPHHHPVREGQVECTDCHNPHGTTGHAMLRGGGVNETCHNCHAEYRGPFLWEHQPVAEDCT HCHNPHGSIHPNMLEARTAQLCQSCHVTTGHPGDLLGPDHEGLSQGQFMTRGQGCTNCHSEVHGSNHPGGAFFKR
Sequences:
>Translated_315_residues MFAQRLIRRLMPFGCAAACFALLVIAPVAGGEDLDPEQLEELVEEVRGLSPVVAERRAEDLRAHIGRMEETPHAVGSDPR TPAGQTREDGNYCYQCHGDGWEHFFEIGEDVSTSQANETCLDCHSGGDRMHWDGGAHEFQDMACVDCHNMHSNNDTLLRE EDQLTLCSSCHQERRVDFNRPHHHPVREGQVECTDCHNPHGTTGHAMLRGGGVNETCHNCHAEYRGPFLWEHQPVAEDCT HCHNPHGSIHPNMLEARTAQLCQSCHVTTGHPGDLLGPDHEGLSQGQFMTRGQGCTNCHSEVHGSNHPGGAFFKR >Mature_315_residues MFAQRLIRRLMPFGCAAACFALLVIAPVAGGEDLDPEQLEELVEEVRGLSPVVAERRAEDLRAHIGRMEETPHAVGSDPR TPAGQTREDGNYCYQCHGDGWEHFFEIGEDVSTSQANETCLDCHSGGDRMHWDGGAHEFQDMACVDCHNMHSNNDTLLRE EDQLTLCSSCHQERRVDFNRPHHHPVREGQVECTDCHNPHGTTGHAMLRGGGVNETCHNCHAEYRGPFLWEHQPVAEDCT HCHNPHGSIHPNMLEARTAQLCQSCHVTTGHPGDLLGPDHEGLSQGQFMTRGQGCTNCHSEVHGSNHPGGAFFKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34927; Mature: 34927
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAQRLIRRLMPFGCAAACFALLVIAPVAGGEDLDPEQLEELVEEVRGLSPVVAERRAED CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH LRAHIGRMEETPHAVGSDPRTPAGQTREDGNYCYQCHGDGWEHFFEIGEDVSTSQANETC HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCHHH LDCHSGGDRMHWDGGAHEFQDMACVDCHNMHSNNDTLLREEDQLTLCSSCHQERRVDFNR HHHCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCC PHHHPVREGQVECTDCHNPHGTTGHAMLRGGGVNETCHNCHAEYRGPFLWEHQPVAEDCT CCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH HCHNPHGSIHPNMLEARTAQLCQSCHVTTGHPGDLLGPDHEGLSQGQFMTRGQGCTNCHS HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHH EVHGSNHPGGAFFKR HHCCCCCCCCCCCCC >Mature Secondary Structure MFAQRLIRRLMPFGCAAACFALLVIAPVAGGEDLDPEQLEELVEEVRGLSPVVAERRAED CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH LRAHIGRMEETPHAVGSDPRTPAGQTREDGNYCYQCHGDGWEHFFEIGEDVSTSQANETC HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCHHH LDCHSGGDRMHWDGGAHEFQDMACVDCHNMHSNNDTLLREEDQLTLCSSCHQERRVDFNR HHHCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCC PHHHPVREGQVECTDCHNPHGTTGHAMLRGGGVNETCHNCHAEYRGPFLWEHQPVAEDCT CCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH HCHNPHGSIHPNMLEARTAQLCQSCHVTTGHPGDLLGPDHEGLSQGQFMTRGQGCTNCHS HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHH EVHGSNHPGGAFFKR HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA