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The map label for this gene is yuxH [H]

Identifier: 121999090

GI number: 121999090

Start: 2538250

End: 2539521

Strand: Reverse

Name: yuxH [H]

Synonym: Hhal_2312

Alternate gene names: 121999090

Gene position: 2539521-2538250 (Counterclockwise)

Preceding gene: 121999091

Following gene: 121999089

Centisome position: 94.81

GC content: 67.14

Gene sequence:

>1272_bases
ATGTCGGAGATCTTTCTGGCCCGTCAGCCGGTATTCGACCGCGAGCTGCGGGTCTGTGGCTACGAACTCCTCTACCGCGC
CGGGCGTGAGGAATCGGCGCGTTTTGCCGACGGCGACGCGGCCACGGCCACTGTAATCCTCAGCGCCTTCATGGAGATCG
GGCTGCGCTCGATCACCGGTGGGCAGCCGGCCTACCTGAACCTCACCCGGCGATTCCTCCTGCAGCAGCCCGTGCCGTTC
CCGCAGCACGAGGTGGTGATCGAGGTCCTCGAGGACGTGGCCCCCGACCAGGAGTTGCGGGCAGCACTGTGCCGGTTGTC
GCGGCAGGGTTACCGGATCGCCCTGGACGACTATCTGCTCGATGACTCCGGCCGGGAGCGGCTGCTGCCGTGCGTGGACA
TGGTCAAGGTCGACGTCCTCGGCATGGCGCCGCAGGAGATCGTGCGCCATGCGCGGACCCTCCAGCGTCAGGGGGTGCCG
TCGTTGCTGGCCGAGAAGATCGAGAGCCGAGAGGTGATGGATCTGTGCCGTGCGGCGGGGTTCGACTATTTCCAGGGGTT
CTTCCTGTCGCGGCCGACCACGCTGTCGCGGCGCTCGGTGCCGCACAACCGCCTGCCGCTGTTGCGCCTGATCGCCTCGC
TGCAGCGCCCGGAACTGGATGTGCGGGAGATCGAGCAGATCATCGGCCAGGATGTGTCACTGTCCTACAAGATCCTGCGC
TATCTGGCCTCGCCGCTGTTCCCCACCCGGGACATCGACAGCATCCGCGCCGCCGTGCTCTACCTGGGGCGCAGGCAGCT
GGCGAACTGGGCTGTGCTGTTGGCCATGACCTCCTGCAACGATCAACCCTCTGAACGCATCGTCGCCCTGCTGGTGCGGG
CGCGCACCTGCGAGCAGTTGGTGCGCCACCGCTACGGCGGTTCCGATCCTGGCGCGGCGTTCACCATCGGATTGTTTTCC
GGGCTCGATGCTGTGCTCGACGCGCCGCTGTCGGTCATCTGTGCCGAGCTGCCGCTCAGCTTCGAGGTGCGTCAGGCGCT
GCTTGAGCTTGAGGGTCCCTACGGGCGCATCCTCGCCGCGGTCCTGGCCCAGGAGCGGGGAGACTGGGAACGTCTGGCAG
CCACCGGGGTCGATCCCATGCAGGTCAACCATCACTATCTCGAGTCGCTGAAGTGGGCGGACGCCCAGTGGGCCTGGCTA
GCTCATCTATCCCGCAGCGAGCGTCCGGAACGGTTGGCCGCCCGCCGGCGTGGTCCGCCGTCGGAATCGTGA

Upstream 100 bases:

>100_bases
GTTGTGTATCGGGGCTGGCTGGCCGCTTGACCGTTGCGCGTCGGTCGGGGAATCTTGCTCCCTGCTCCCCCCGAGAGCTG
CGTCGTGGAGTTTCGCTGCC

Downstream 100 bases:

>100_bases
TCCCAGGGGAGGCGGCCGTTGCCCGAGCTGCCCGAGGTTGAGACCACCCGTCGCGGCCTGCAGGTCCACCTGGTCGGGCG
TACCCTGCAGCGCGTCGTGG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSEIFLARQPVFDRELRVCGYELLYRAGREESARFADGDAATATVILSAFMEIGLRSITGGQPAYLNLTRRFLLQQPVPF
PQHEVVIEVLEDVAPDQELRAALCRLSRQGYRIALDDYLLDDSGRERLLPCVDMVKVDVLGMAPQEIVRHARTLQRQGVP
SLLAEKIESREVMDLCRAAGFDYFQGFFLSRPTTLSRRSVPHNRLPLLRLIASLQRPELDVREIEQIIGQDVSLSYKILR
YLASPLFPTRDIDSIRAAVLYLGRRQLANWAVLLAMTSCNDQPSERIVALLVRARTCEQLVRHRYGGSDPGAAFTIGLFS
GLDAVLDAPLSVICAELPLSFEVRQALLELEGPYGRILAAVLAQERGDWERLAATGVDPMQVNHHYLESLKWADAQWAWL
AHLSRSERPERLAARRRGPPSES

Sequences:

>Translated_423_residues
MSEIFLARQPVFDRELRVCGYELLYRAGREESARFADGDAATATVILSAFMEIGLRSITGGQPAYLNLTRRFLLQQPVPF
PQHEVVIEVLEDVAPDQELRAALCRLSRQGYRIALDDYLLDDSGRERLLPCVDMVKVDVLGMAPQEIVRHARTLQRQGVP
SLLAEKIESREVMDLCRAAGFDYFQGFFLSRPTTLSRRSVPHNRLPLLRLIASLQRPELDVREIEQIIGQDVSLSYKILR
YLASPLFPTRDIDSIRAAVLYLGRRQLANWAVLLAMTSCNDQPSERIVALLVRARTCEQLVRHRYGGSDPGAAFTIGLFS
GLDAVLDAPLSVICAELPLSFEVRQALLELEGPYGRILAAVLAQERGDWERLAATGVDPMQVNHHYLESLKWADAQWAWL
AHLSRSERPERLAARRRGPPSES
>Mature_422_residues
SEIFLARQPVFDRELRVCGYELLYRAGREESARFADGDAATATVILSAFMEIGLRSITGGQPAYLNLTRRFLLQQPVPFP
QHEVVIEVLEDVAPDQELRAALCRLSRQGYRIALDDYLLDDSGRERLLPCVDMVKVDVLGMAPQEIVRHARTLQRQGVPS
LLAEKIESREVMDLCRAAGFDYFQGFFLSRPTTLSRRSVPHNRLPLLRLIASLQRPELDVREIEQIIGQDVSLSYKILRY
LASPLFPTRDIDSIRAAVLYLGRRQLANWAVLLAMTSCNDQPSERIVALLVRARTCEQLVRHRYGGSDPGAAFTIGLFSG
LDAVLDAPLSVICAELPLSFEVRQALLELEGPYGRILAAVLAQERGDWERLAATGVDPMQVNHHYLESLKWADAQWAWLA
HLSRSERPERLAARRRGPPSES

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 47638; Mature: 47507

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIFLARQPVFDRELRVCGYELLYRAGREESARFADGDAATATVILSAFMEIGLRSITG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GQPAYLNLTRRFLLQQPVPFPQHEVVIEVLEDVAPDQELRAALCRLSRQGYRIALDDYLL
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHEE
DDSGRERLLPCVDMVKVDVLGMAPQEIVRHARTLQRQGVPSLLAEKIESREVMDLCRAAG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
FDYFQGFFLSRPTTLSRRSVPHNRLPLLRLIASLQRPELDVREIEQIIGQDVSLSYKILR
CHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH
YLASPLFPTRDIDSIRAAVLYLGRRQLANWAVLLAMTSCNDQPSERIVALLVRARTCEQL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHH
VRHRYGGSDPGAAFTIGLFSGLDAVLDAPLSVICAELPLSFEVRQALLELEGPYGRILAA
HHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
VLAQERGDWERLAATGVDPMQVNHHYLESLKWADAQWAWLAHLSRSERPERLAARRRGPP
HHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCC
SES
CCC
>Mature Secondary Structure 
SEIFLARQPVFDRELRVCGYELLYRAGREESARFADGDAATATVILSAFMEIGLRSITG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GQPAYLNLTRRFLLQQPVPFPQHEVVIEVLEDVAPDQELRAALCRLSRQGYRIALDDYLL
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHEE
DDSGRERLLPCVDMVKVDVLGMAPQEIVRHARTLQRQGVPSLLAEKIESREVMDLCRAAG
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
FDYFQGFFLSRPTTLSRRSVPHNRLPLLRLIASLQRPELDVREIEQIIGQDVSLSYKILR
CHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH
YLASPLFPTRDIDSIRAAVLYLGRRQLANWAVLLAMTSCNDQPSERIVALLVRARTCEQL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHH
VRHRYGGSDPGAAFTIGLFSGLDAVLDAPLSVICAELPLSFEVRQALLELEGPYGRILAA
HHHHCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
VLAQERGDWERLAATGVDPMQVNHHYLESLKWADAQWAWLAHLSRSERPERLAARRRGPP
HHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCC
SES
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]