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The map label for this gene is ftsY [H]

Identifier: 121999083

GI number: 121999083

Start: 2532155

End: 2533102

Strand: Reverse

Name: ftsY [H]

Synonym: Hhal_2305

Alternate gene names: 121999083

Gene position: 2533102-2532155 (Counterclockwise)

Preceding gene: 121999089

Following gene: 121999082

Centisome position: 94.57

GC content: 69.73

Gene sequence:

>948_bases
ATGAGCGAAAGCGAGAAGACCGACAAACGCCCCGGGCTGATGGGGCGACTGCGCAACGGGCTGCGGCGGACCCGCAGCGG
GCTCACCGAAGGGCTGGCGACGTTGTTCGTTGGCCGCCGCGAACTCGACGACGAGCTCCTCGAGGAGCTGGAGATGCGTC
TGCTCCAGGCCGACGTCGGCATGGAGGCGACGCAGAAGGTGCTCGACGGTCTCGTCGAGCGCCTCGGTGGTTCCGGCGGC
GGTACCGGCGAGACGGTGCTGGAGGCCCTGCGCAGCGAGATCGTCAAGGTGCTCGAGCCGGTGGAGAAGCCGCTGCAGAT
CGATACCGACAAGCGGCCCTTCGTCATCCTCACGGTCGGGGTCAACGGGGCCGGCAAGACCACCACCATCGGCAAGCTGG
CGGCCCGTTTTCAGAACGAGGGGCGGTCGGTGATGGTCGCCGCAGGCGATACCTTCCGCGCCGCTGCAGTGGATCAGCTC
CAGCAGTGGGGCGAACGGGTCGGTTGCCCGGTGATCGCCCAGCCCACGGGCTCGGATCCCGCCTCGGTGGTCTTCGATGC
CCACCAGGCCGCCCGCGCCCGCGGTGCGGATGTGCTCATCGCCGATACCGCCGGCCGCCTGCACACCCAGGACAACCTCA
TGGAGGAGCTGCGCAAGATCCGCCGCGTGCTCGGCCGGCAGGATGCCGATGCGCCCCACGAGACCCTCCTTGTGCTCGAC
GGTGGCAACGGCCAGAACGCACTGGCCCAGGCCGAGCAGTTCGGCGCGGCGGTGAACGTGACCGGTCTGGCCGTGACCAA
GCTGGACGGGACCGCCCGTGGTGGCGTGCTGCTGGCCCTGGCCGAGCGGCTCCAGGTGCCGGTGCGCTACATCGGCGTGG
GTGAGAAGGTCGAGGACCTGCGCACCTTCCGTGCGGCCGACTTTGCCGAGGCGCTGACCGCCGAATGA

Upstream 100 bases:

>100_bases
GGTTCGGCACCAATGGTAGGATACCCGACAGCGCAAGTCGCGGGCGGCAGCGCCCATCGGGCCCGCGGCATCCCAATGGA
CCACAACAGTGCCGAAGGTC

Downstream 100 bases:

>100_bases
TCCACTTCGACCGGGTCAGCAAGCGCTACCCGCGCGCTGGCCAGGACGGCCTGCGGGGCGTCAGCCTGGAGATCGGTCAG
GGCGAGCTGGTCTTCATCAC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSESEKTDKRPGLMGRLRNGLRRTRSGLTEGLATLFVGRRELDDELLEELEMRLLQADVGMEATQKVLDGLVERLGGSGG
GTGETVLEALRSEIVKVLEPVEKPLQIDTDKRPFVILTVGVNGAGKTTTIGKLAARFQNEGRSVMVAAGDTFRAAAVDQL
QQWGERVGCPVIAQPTGSDPASVVFDAHQAARARGADVLIADTAGRLHTQDNLMEELRKIRRVLGRQDADAPHETLLVLD
GGNGQNALAQAEQFGAAVNVTGLAVTKLDGTARGGVLLALAERLQVPVRYIGVGEKVEDLRTFRAADFAEALTAE

Sequences:

>Translated_315_residues
MSESEKTDKRPGLMGRLRNGLRRTRSGLTEGLATLFVGRRELDDELLEELEMRLLQADVGMEATQKVLDGLVERLGGSGG
GTGETVLEALRSEIVKVLEPVEKPLQIDTDKRPFVILTVGVNGAGKTTTIGKLAARFQNEGRSVMVAAGDTFRAAAVDQL
QQWGERVGCPVIAQPTGSDPASVVFDAHQAARARGADVLIADTAGRLHTQDNLMEELRKIRRVLGRQDADAPHETLLVLD
GGNGQNALAQAEQFGAAVNVTGLAVTKLDGTARGGVLLALAERLQVPVRYIGVGEKVEDLRTFRAADFAEALTAE
>Mature_314_residues
SESEKTDKRPGLMGRLRNGLRRTRSGLTEGLATLFVGRRELDDELLEELEMRLLQADVGMEATQKVLDGLVERLGGSGGG
TGETVLEALRSEIVKVLEPVEKPLQIDTDKRPFVILTVGVNGAGKTTTIGKLAARFQNEGRSVMVAAGDTFRAAAVDQLQ
QWGERVGCPVIAQPTGSDPASVVFDAHQAARARGADVLIADTAGRLHTQDNLMEELRKIRRVLGRQDADAPHETLLVLDG
GNGQNALAQAEQFGAAVNVTGLAVTKLDGTARGGVLLALAERLQVPVRYIGVGEKVEDLRTFRAADFAEALTAE

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=295, Percent_Identity=30.5084745762712, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI226371618, Length=235, Percent_Identity=33.1914893617021, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI295424842, Length=299, Percent_Identity=27.4247491638796, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI23308697, Length=299, Percent_Identity=27.4247491638796, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=30.6569343065693, Blast_Score=78, Evalue=9e-15,
Organism=Escherichia coli, GI1789874, Length=312, Percent_Identity=54.4871794871795, Blast_Score=315, Evalue=3e-87,
Organism=Escherichia coli, GI1788963, Length=263, Percent_Identity=33.4600760456274, Blast_Score=148, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI17539958, Length=274, Percent_Identity=29.5620437956204, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI193206261, Length=309, Percent_Identity=27.831715210356, Blast_Score=105, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=279, Percent_Identity=29.3906810035842, Blast_Score=134, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320498, Length=307, Percent_Identity=26.3843648208469, Blast_Score=90, Evalue=5e-19,
Organism=Drosophila melanogaster, GI17647949, Length=273, Percent_Identity=31.5018315018315, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24641198, Length=289, Percent_Identity=26.2975778546713, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33682; Mature: 33551

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESEKTDKRPGLMGRLRNGLRRTRSGLTEGLATLFVGRRELDDELLEELEMRLLQADVG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MEATQKVLDGLVERLGGSGGGTGETVLEALRSEIVKVLEPVEKPLQIDTDKRPFVILTVG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
VNGAGKTTTIGKLAARFQNEGRSVMVAAGDTFRAAAVDQLQQWGERVGCPVIAQPTGSDP
CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCC
ASVVFDAHQAARARGADVLIADTAGRLHTQDNLMEELRKIRRVLGRQDADAPHETLLVLD
HHHEECCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
GGNGQNALAQAEQFGAAVNVTGLAVTKLDGTARGGVLLALAERLQVPVRYIGVGEKVEDL
CCCCCHHHHHHHHHCCEEEECEEEEEECCCCCCCHHHHHHHHHHCCCHHEECCCHHHHHH
RTFRAADFAEALTAE
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SESEKTDKRPGLMGRLRNGLRRTRSGLTEGLATLFVGRRELDDELLEELEMRLLQADVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MEATQKVLDGLVERLGGSGGGTGETVLEALRSEIVKVLEPVEKPLQIDTDKRPFVILTVG
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
VNGAGKTTTIGKLAARFQNEGRSVMVAAGDTFRAAAVDQLQQWGERVGCPVIAQPTGSDP
CCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCC
ASVVFDAHQAARARGADVLIADTAGRLHTQDNLMEELRKIRRVLGRQDADAPHETLLVLD
HHHEECCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
GGNGQNALAQAEQFGAAVNVTGLAVTKLDGTARGGVLLALAERLQVPVRYIGVGEKVEDL
CCCCCHHHHHHHHHCCEEEECEEEEEECCCCCCCHHHHHHHHHHCCCHHEECCCHHHHHH
RTFRAADFAEALTAE
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]