| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is znuA [C]
Identifier: 121998955
GI number: 121998955
Start: 2386672
End: 2387634
Strand: Reverse
Name: znuA [C]
Synonym: Hhal_2176
Alternate gene names: 121998955
Gene position: 2387634-2386672 (Counterclockwise)
Preceding gene: 121998956
Following gene: 121998954
Centisome position: 89.14
GC content: 68.12
Gene sequence:
>963_bases ATGAACGACACAAACAGACTGAGGGAGCCGGGTACGCCTGGGGGCAGGCGTGGCTGGCAGGCGGGCCGCTCTAGGCGCTG GGTCCTGGCGCTGGCTGTGGCGGTGGCGTTGACGCCGTCGGCCGCTGCGGCGGAGGGGCCGCTCCGCATTGCCGCCACGT TCACCATCCTGGCCGATCTGGTTGAACAGGTCGGCGGGGACCGGGTGGCCGTCAGCAGCCTGACCCCGGTGGACGCCGAG GTCCACGAGTGGGAGTTGCAGCCGCGCAACTTCCGGGATCTTGAGCGCGCCGATGGGGTCTTCTATAACGGCTACGATCT GGAGCAGTGGATGCGCCAGGTGCGCGCCACCGCGGGCGATCAGGTGCCGGTGGTTGCCGTGGCCGAGCGCTCGGGGCACG ACACCCTGCCGATCCGTATCGGCGATTTCGAGGGCGACCCGGATCCGCACCTGTGGATGGATCCGCGGGCGGTCCAGGGC TACGTCAGCGCCATCCGTGACGCCCTGATCGAGCTCGACCCCAAGGGGGAGGGCGTCTACCGCGACAATGCTGCGGCCTA TCAGGAAGAGCTGGAGACCCTCTTTACGCAGATCGGCGAAAAACTCGAGGCAGTCCCCGAGGCGCAGCGCTTCCTGGTCA CCAGCGAGGCGGCCTTCCCTTACTTTGCAGAGGCCTTCGGCTTCGAGCACGACGGGATCTGGGGCACCAACGCCGAGCAG GAGGGTTCGCCCCGACAGATCATGCGGGTCATCGACCGGGTCCGGGAGTGGCAGCCCGGGGCGGTGTTCTGGGAGAGCAC CATCTCGGATCGCCATGTGCGTTCGGTGGCCGATGAGACCGGTGTCGAGATCGCCGGCCCCCTCTACGTCGATTCGCTCA GCGGGGCGGACGGCCCGGCGGCTGATTACCTGCAGATGATGCGCCACAACGCCGAGACCATCGTGGGCGCGCTGGCCGAG TAA
Upstream 100 bases:
>100_bases AGTGTTCGCCGCCCGGCGGCCAATCAGCCGTGCTGTGGCCGCCCGGCCCGCCGGCGCGGGTGGCTGGACGCAGGCGGTCG TAGCGAGGAAACTGGTCAAG
Downstream 100 bases:
>100_bases AGCGGGGCAGCATTGGCGTACCACGCAGGCAGTGCAATGGGGGCAGCGGGCAGGGGGGACGGCTTGGTGGCCATCGAAGC GGAGGGGCTGTGCGCCGGCT
Product: periplasmic solute-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MNDTNRLREPGTPGGRRGWQAGRSRRWVLALAVAVALTPSAAAAEGPLRIAATFTILADLVEQVGGDRVAVSSLTPVDAE VHEWELQPRNFRDLERADGVFYNGYDLEQWMRQVRATAGDQVPVVAVAERSGHDTLPIRIGDFEGDPDPHLWMDPRAVQG YVSAIRDALIELDPKGEGVYRDNAAAYQEELETLFTQIGEKLEAVPEAQRFLVTSEAAFPYFAEAFGFEHDGIWGTNAEQ EGSPRQIMRVIDRVREWQPGAVFWESTISDRHVRSVADETGVEIAGPLYVDSLSGADGPAADYLQMMRHNAETIVGALAE
Sequences:
>Translated_320_residues MNDTNRLREPGTPGGRRGWQAGRSRRWVLALAVAVALTPSAAAAEGPLRIAATFTILADLVEQVGGDRVAVSSLTPVDAE VHEWELQPRNFRDLERADGVFYNGYDLEQWMRQVRATAGDQVPVVAVAERSGHDTLPIRIGDFEGDPDPHLWMDPRAVQG YVSAIRDALIELDPKGEGVYRDNAAAYQEELETLFTQIGEKLEAVPEAQRFLVTSEAAFPYFAEAFGFEHDGIWGTNAEQ EGSPRQIMRVIDRVREWQPGAVFWESTISDRHVRSVADETGVEIAGPLYVDSLSGADGPAADYLQMMRHNAETIVGALAE >Mature_320_residues MNDTNRLREPGTPGGRRGWQAGRSRRWVLALAVAVALTPSAAAAEGPLRIAATFTILADLVEQVGGDRVAVSSLTPVDAE VHEWELQPRNFRDLERADGVFYNGYDLEQWMRQVRATAGDQVPVVAVAERSGHDTLPIRIGDFEGDPDPHLWMDPRAVQG YVSAIRDALIELDPKGEGVYRDNAAAYQEELETLFTQIGEKLEAVPEAQRFLVTSEAAFPYFAEAFGFEHDGIWGTNAEQ EGSPRQIMRVIDRVREWQPGAVFWESTISDRHVRSVADETGVEIAGPLYVDSLSGADGPAADYLQMMRHNAETIVGALAE
Specific function: Part of an ATP-driven transport system HI_0359/HI_0360/HI_0361/HI_0362 for iron. Metal-binding component (Potential) [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=230, Percent_Identity=24.3478260869565, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 35258; Mature: 35258
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTNRLREPGTPGGRRGWQAGRSRRWVLALAVAVALTPSAAAAEGPLRIAATFTILADL CCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCEEHHHHHHHHHHH VEQVGGDRVAVSSLTPVDAEVHEWELQPRNFRDLERADGVFYNGYDLEQWMRQVRATAGD HHHHCCCEEEECCCCCCCCHHHHEECCCCCCHHHHHHCCCEECCCCHHHHHHHHHHCCCC QVPVVAVAERSGHDTLPIRIGDFEGDPDPHLWMDPRAVQGYVSAIRDALIELDPKGEGVY CCCEEEEECCCCCCEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCC RDNAAAYQEELETLFTQIGEKLEAVPEAQRFLVTSEAAFPYFAEAFGFEHDGIWGTNAEQ CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEECCCCCHHHHHHHCCCCCCCCCCCCCC EGSPRQIMRVIDRVREWQPGAVFWESTISDRHVRSVADETGVEIAGPLYVDSLSGADGPA CCCHHHHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHCCCEEECCEEEECCCCCCCCH ADYLQMMRHNAETIVGALAE HHHHHHHHHCHHHHHHHHCC >Mature Secondary Structure MNDTNRLREPGTPGGRRGWQAGRSRRWVLALAVAVALTPSAAAAEGPLRIAATFTILADL CCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCEEHHHHHHHHHHH VEQVGGDRVAVSSLTPVDAEVHEWELQPRNFRDLERADGVFYNGYDLEQWMRQVRATAGD HHHHCCCEEEECCCCCCCCHHHHEECCCCCCHHHHHHCCCEECCCCHHHHHHHHHHCCCC QVPVVAVAERSGHDTLPIRIGDFEGDPDPHLWMDPRAVQGYVSAIRDALIELDPKGEGVY CCCEEEEECCCCCCEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCC RDNAAAYQEELETLFTQIGEKLEAVPEAQRFLVTSEAAFPYFAEAFGFEHDGIWGTNAEQ CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEECCCCCHHHHHHHCCCCCCCCCCCCCC EGSPRQIMRVIDRVREWQPGAVFWESTISDRHVRSVADETGVEIAGPLYVDSLSGADGPA CCCHHHHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHCCCEEECCEEEECCCCCCCCH ADYLQMMRHNAETIVGALAE HHHHHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 1556062; 10675023 [H]