Click here to switch to the map view.

The map label for this gene is yeaY [H]

Identifier: 121998952

GI number: 121998952

Start: 2384303

End: 2384872

Strand: Reverse

Name: yeaY [H]

Synonym: Hhal_2173

Alternate gene names: 121998952

Gene position: 2384872-2384303 (Counterclockwise)

Preceding gene: 121998953

Following gene: 121998951

Centisome position: 89.04

GC content: 70.53

Gene sequence:

>570_bases
GTGGTGTCCATCCGAGTCCTGTTCCTGGTGGTGATGGCGTGGCTGCTGGCGGGGTGCGCCAGTACGGTGCCGGATCCGGT
ACGCAGTCCCCCGGACGAGACCCCATCCCTGGCGCAGGTGCGCGACGACCCCGGGGGCCACGACGGCGAATCGGTGCGCT
GGGGCGGGGAGATCGTCGAGGTGCGCAACGAGGCCGACGCCACCTGGCTGGAGATCGTCGAGCGGCCGCTGCGCAGCGGT
GGCCAGCCCCGTGATGCGGACCGTTCGGAGGGCCGCTTCCTGGCGCGGGTCGAAGGGTTCCTGGAGCCCACGCTCTACGC
CCCGGGGCGGGAGTTCACCGTGGCCGGGACCCTGGACGGCACCGTGAAAGGGGCGATCGGCGAGTACGGCTACACCTATC
CGGTGGTCGAAGTCGCAGCCCACCATCTCTGGCAGGAGCGGGCCGAGCCCAGGCAGGTGGCCCCGCGTCCCTACTACGAT
CCGTGGTATGACCCCTGGTGCGACCATCGCTGGTACCGGCATCCGGGGTCCCCTTATTACTACGGGCCCTACCGGCGGCC
GTACTGGTGA

Upstream 100 bases:

>100_bases
CGGTCTCTTGCCGCGGTGGGTGCGTCGCTGGCGGGCGGTGGCCGCCGGCTAGCGGCTTTGTATACTGAGGGGGGGAGAGC
CCGAGCCGACGGAGGCCGCT

Downstream 100 bases:

>100_bases
TGGGGCGCTCCGCAGTCGCTCGCCGCGGGCGCTCGGCCCGCGTGGTCCGCTGGTTGCTGCCGGCTGCTGCGGTGGTCCTG
CTGGGCTGTGCCGCCGGCGC

Product: Slp family outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MVSIRVLFLVVMAWLLAGCASTVPDPVRSPPDETPSLAQVRDDPGGHDGESVRWGGEIVEVRNEADATWLEIVERPLRSG
GQPRDADRSEGRFLARVEGFLEPTLYAPGREFTVAGTLDGTVKGAIGEYGYTYPVVEVAAHHLWQERAEPRQVAPRPYYD
PWYDPWCDHRWYRHPGSPYYYGPYRRPYW

Sequences:

>Translated_189_residues
MVSIRVLFLVVMAWLLAGCASTVPDPVRSPPDETPSLAQVRDDPGGHDGESVRWGGEIVEVRNEADATWLEIVERPLRSG
GQPRDADRSEGRFLARVEGFLEPTLYAPGREFTVAGTLDGTVKGAIGEYGYTYPVVEVAAHHLWQERAEPRQVAPRPYYD
PWYDPWCDHRWYRHPGSPYYYGPYRRPYW
>Mature_189_residues
MVSIRVLFLVVMAWLLAGCASTVPDPVRSPPDETPSLAQVRDDPGGHDGESVRWGGEIVEVRNEADATWLEIVERPLRSG
GQPRDADRSEGRFLARVEGFLEPTLYAPGREFTVAGTLDGTVKGAIGEYGYTYPVVEVAAHHLWQERAEPRQVAPRPYYD
PWYDPWCDHRWYRHPGSPYYYGPYRRPYW

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=164, Percent_Identity=36.5853658536585, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87082278, Length=142, Percent_Identity=32.3943661971831, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 21548; Mature: 21548

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIRVLFLVVMAWLLAGCASTVPDPVRSPPDETPSLAQVRDDPGGHDGESVRWGGEIVE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCEEE
VRNEADATWLEIVERPLRSGGQPRDADRSEGRFLARVEGFLEPTLYAPGREFTVAGTLDG
ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCEECCCCCEEEEECCCC
TVKGAIGEYGYTYPVVEVAAHHLWQERAEPRQVAPRPYYDPWYDPWCDHRWYRHPGSPYY
CHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
YGPYRRPYW
ECCCCCCCC
>Mature Secondary Structure
MVSIRVLFLVVMAWLLAGCASTVPDPVRSPPDETPSLAQVRDDPGGHDGESVRWGGEIVE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCEEE
VRNEADATWLEIVERPLRSGGQPRDADRSEGRFLARVEGFLEPTLYAPGREFTVAGTLDG
ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCEECCCCCEEEEECCCC
TVKGAIGEYGYTYPVVEVAAHHLWQERAEPRQVAPRPYYDPWYDPWCDHRWYRHPGSPYY
CHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
YGPYRRPYW
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]