| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is ackA [H]
Identifier: 121998839
GI number: 121998839
Start: 2261956
End: 2263128
Strand: Reverse
Name: ackA [H]
Synonym: Hhal_2060
Alternate gene names: 121998839
Gene position: 2263128-2261956 (Counterclockwise)
Preceding gene: 121998840
Following gene: 121998838
Centisome position: 84.49
GC content: 72.38
Gene sequence:
>1173_bases ATGCCCGACGCCATCCTGGTCCTCAACGCCGGTTCCTCCAGCGTCAAATACGCCGTCTACCGCCGCGAGGATGACGGCAC CCTGGAGGTGCGTCTGCGCGGTCAGGTGGAAGGTTTGGGGGGGGCAGCGCGGCTGCATGTGGACGACCTCGACGGCGCCG TGACCACCCGTGAGCTGGGTGCGGGTGCCGACCACGATGCAGCGCTGGCGGCGGTGCTCGAGGCCGTCCACGCCCATCTG GGCGATCTGACCCTGGTGGGCGTGGGGCACCGCGTGGTGCACGGCGGTCAGGTCCACAGCGCGCCGGTGGTGATTGACGA GGCGGTCCTCGACGCCCTGCACCGCCTTGAACCCCTGGCGCCGCTGCACCAGCCCCACAACCTGGCCGCCGTCGAGGCGG TGGGCCGGGTGGCCCCGGACCTGCCCCAGGTGGCCTGCTTCGATACCGCGTTCCACCGCACGCAGCCCGCGGTGGCACAA CGCTTCGCCCTGCCGCGCGCCTACGAGCAGCGCGGCGTGCTGCGCTACGGCTTCCACGGGCTCTCCTACGAGTTCATCGC CGCCCGCCTGCCAGAATACGATCCGGACGCCGCGAACGGGTGCACCGTGGTCGCCCACCTGGGTGCCGGCGCCAGCCTCT GCGCCCTGGATCAGGGGCGTAGCGTGGCTACCACCATGGGCTTCACCGCCCTCGACGGCCTGCCCATGGGGCAGCGCTGC GGCAACATCGACCCCGGGGTGATCCTGTACCTGCTGCAGCAGGAGGGCATGACGCCGGCCGAGATCGAGCGCCTCCTCTA CCGGGAGTCGGGCCTTCTGGGCGTCTCCGGGGTCTCCGCGGACATGCGCGTGCTCCTCGACAGCGACGACCCGGCCGCCG CCGAGGCCATCGACCTCTTCTGCCACCGCGCGCTGCGCGAGATCGGCGGCCTGGCTGCAGTGCTCGGCGGGCTCGACGCC GTGGTCTTCACCGCCGGGATCGGCGAGCACGCTGCCCCGGTGCGCCAGCGCATCCTTGAGGGGTTGGGCTGGCTCGGTCT GGAACTCGACGACGCCGCCAACGCGGCCGACGGGCCGCGGATCACGACGCCGGGCAGCGCGGTCAACGCCTGGGTCATCC CCACCGACGAGGAGCGGGTCATCGCCGCTCACGCCGCACGGCTGGTGCCCTGA
Upstream 100 bases:
>100_bases GACGACGTCATCGCCCGGTTGGCCTCCTGCGCCGTTGCGCTGCTGGTGGCCGAGCGCAAGCGCCGCGGCCTAGCCCACCT CTAGCCGCGGGACCGAGTCC
Downstream 100 bases:
>100_bases AACGGCGCTCGCCGCCGTCGGGGCGGCATATGTACAATGTCCGGACGCTGAGAAAGGCAGGCCCGATGAGCGATCGCTAC CCGGAGACGCTCCACCGCAG
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MPDAILVLNAGSSSVKYAVYRREDDGTLEVRLRGQVEGLGGAARLHVDDLDGAVTTRELGAGADHDAALAAVLEAVHAHL GDLTLVGVGHRVVHGGQVHSAPVVIDEAVLDALHRLEPLAPLHQPHNLAAVEAVGRVAPDLPQVACFDTAFHRTQPAVAQ RFALPRAYEQRGVLRYGFHGLSYEFIAARLPEYDPDAANGCTVVAHLGAGASLCALDQGRSVATTMGFTALDGLPMGQRC GNIDPGVILYLLQQEGMTPAEIERLLYRESGLLGVSGVSADMRVLLDSDDPAAAEAIDLFCHRALREIGGLAAVLGGLDA VVFTAGIGEHAAPVRQRILEGLGWLGLELDDAANAADGPRITTPGSAVNAWVIPTDEERVIAAHAARLVP
Sequences:
>Translated_390_residues MPDAILVLNAGSSSVKYAVYRREDDGTLEVRLRGQVEGLGGAARLHVDDLDGAVTTRELGAGADHDAALAAVLEAVHAHL GDLTLVGVGHRVVHGGQVHSAPVVIDEAVLDALHRLEPLAPLHQPHNLAAVEAVGRVAPDLPQVACFDTAFHRTQPAVAQ RFALPRAYEQRGVLRYGFHGLSYEFIAARLPEYDPDAANGCTVVAHLGAGASLCALDQGRSVATTMGFTALDGLPMGQRC GNIDPGVILYLLQQEGMTPAEIERLLYRESGLLGVSGVSADMRVLLDSDDPAAAEAIDLFCHRALREIGGLAAVLGGLDA VVFTAGIGEHAAPVRQRILEGLGWLGLELDDAANAADGPRITTPGSAVNAWVIPTDEERVIAAHAARLVP >Mature_389_residues PDAILVLNAGSSSVKYAVYRREDDGTLEVRLRGQVEGLGGAARLHVDDLDGAVTTRELGAGADHDAALAAVLEAVHAHLG DLTLVGVGHRVVHGGQVHSAPVVIDEAVLDALHRLEPLAPLHQPHNLAAVEAVGRVAPDLPQVACFDTAFHRTQPAVAQR FALPRAYEQRGVLRYGFHGLSYEFIAARLPEYDPDAANGCTVVAHLGAGASLCALDQGRSVATTMGFTALDGLPMGQRCG NIDPGVILYLLQQEGMTPAEIERLLYRESGLLGVSGVSADMRVLLDSDDPAAAEAIDLFCHRALREIGGLAAVLGGLDAV VFTAGIGEHAAPVRQRILEGLGWLGLELDDAANAADGPRITTPGSAVNAWVIPTDEERVIAAHAARLVP
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
Organism=Escherichia coli, GI145693184, Length=400, Percent_Identity=39.75, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1788633, Length=401, Percent_Identity=40.8977556109726, Blast_Score=248, Evalue=4e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR004372 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.1 [H]
Molecular weight: Translated: 40889; Mature: 40758
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS01075 ACETATE_KINASE_1 ; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDAILVLNAGSSSVKYAVYRREDDGTLEVRLRGQVEGLGGAARLHVDDLDGAVTTRELG CCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCEEHHHHC AGADHDAALAAVLEAVHAHLGDLTLVGVGHRVVHGGQVHSAPVVIDEAVLDALHRLEPLA CCCCHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCEEEHHHHHHHHHHHCCCC PLHQPHNLAAVEAVGRVAPDLPQVACFDTAFHRTQPAVAQRFALPRAYEQRGVLRYGFHG CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCEEECCCC LSYEFIAARLPEYDPDAANGCTVVAHLGAGASLCALDQGRSVATTMGFTALDGLPMGQRC CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEHHCCHHHHCCCCCHHHC GNIDPGVILYLLQQEGMTPAEIERLLYRESGLLGVSGVSADMRVLLDSDDPAAAEAIDLF CCCCHHHEEEEEHHCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHHH CHRALREIGGLAAVLGGLDAVVFTAGIGEHAAPVRQRILEGLGWLGLELDDAANAADGPR HHHHHHHHHHHHHHHHCHHEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCE ITTPGSAVNAWVIPTDEERVIAAHAARLVP EECCCCCCEEEEECCCCCHHHHHHHHHCCC >Mature Secondary Structure PDAILVLNAGSSSVKYAVYRREDDGTLEVRLRGQVEGLGGAARLHVDDLDGAVTTRELG CCEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCEEHHHHC AGADHDAALAAVLEAVHAHLGDLTLVGVGHRVVHGGQVHSAPVVIDEAVLDALHRLEPLA CCCCHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCEEEHHHHHHHHHHHCCCC PLHQPHNLAAVEAVGRVAPDLPQVACFDTAFHRTQPAVAQRFALPRAYEQRGVLRYGFHG CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCEEECCCC LSYEFIAARLPEYDPDAANGCTVVAHLGAGASLCALDQGRSVATTMGFTALDGLPMGQRC CCHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEHHCCHHHHCCCCCHHHC GNIDPGVILYLLQQEGMTPAEIERLLYRESGLLGVSGVSADMRVLLDSDDPAAAEAIDLF CCCCHHHEEEEEHHCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHHH CHRALREIGGLAAVLGGLDAVVFTAGIGEHAAPVRQRILEGLGWLGLELDDAANAADGPR HHHHHHHHHHHHHHHHCHHEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCE ITTPGSAVNAWVIPTDEERVIAAHAARLVP EECCCCCCEEEEECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA