| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is 121998809
Identifier: 121998809
GI number: 121998809
Start: 2233834
End: 2234106
Strand: Reverse
Name: 121998809
Synonym: Hhal_2030
Alternate gene names: NA
Gene position: 2234106-2233834 (Counterclockwise)
Preceding gene: 121998810
Following gene: 121998808
Centisome position: 83.41
GC content: 65.2
Gene sequence:
>273_bases ATGCTGGGGATTGCCGTAACCCTCGTCTTTGCCATGCTCTCGGCGTCGCTGGTGCTGGCCTTCGTGCGCCTGGCCAAGGG TCCGATGCTGCCCAATCGGGTGGTGGCCCTGGAGCTGATCGCCTCGATCCTGGTCGGGTTCATCGGTGCCTACGCGATCC ACACCGGGGTCGATGATTTCATCGACGTGGCGATCGTCCTGGCGCTGCTCGCCTTCATGGCCGCCGTGGGGTTCGCCCGC TATCTGGAGAAAGGGGGGCCGCGGGATGACTGA
Upstream 100 bases:
>100_bases GCCGGGTGCTCTACATCCACGCCATGTACATCGACAGCGAGGAGGCACTGCTGGATGAGGTCAAGGAGCTGGAGCGCCGG GTGCTGGAGGTGATGCGCTG
Downstream 100 bases:
>100_bases TTTCCTGCAGGAGCTGATCGCCTCGGTCCTGCTGCTGCTCGGCGGCGGGTTGATGCTCATCGCCGCGGTGGGGCTCTACC GTCTGCCGGATCTGCTCACC
Product: multiple resistance and pH regulation protein F
Products: NA
Alternate protein names: Monovalent Cation/H+ Antiporter Subunit F; PH Adaptation Potassium Efflux System PhaF; Na(+) H(+) Antiporter Subunit F
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MLGIAVTLVFAMLSASLVLAFVRLAKGPMLPNRVVALELIASILVGFIGAYAIHTGVDDFIDVAIVLALLAFMAAVGFAR YLEKGGPRDD
Sequences:
>Translated_90_residues MLGIAVTLVFAMLSASLVLAFVRLAKGPMLPNRVVALELIASILVGFIGAYAIHTGVDDFIDVAIVLALLAFMAAVGFAR YLEKGGPRDD >Mature_90_residues MLGIAVTLVFAMLSASLVLAFVRLAKGPMLPNRVVALELIASILVGFIGAYAIHTGVDDFIDVAIVLALLAFMAAVGFAR YLEKGGPRDD
Specific function: Unknown
COG id: COG2212
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9463; Mature: 9463
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIAVTLVFAMLSASLVLAFVRLAKGPMLPNRVVALELIASILVGFIGAYAIHTGVDDF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH IDVAIVLALLAFMAAVGFARYLEKGGPRDD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLGIAVTLVFAMLSASLVLAFVRLAKGPMLPNRVVALELIASILVGFIGAYAIHTGVDDF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH IDVAIVLALLAFMAAVGFARYLEKGGPRDD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA