| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998808
Identifier: 121998808
GI number: 121998808
Start: 2233455
End: 2233841
Strand: Reverse
Name: 121998808
Synonym: Hhal_2029
Alternate gene names: NA
Gene position: 2233841-2233455 (Counterclockwise)
Preceding gene: 121998809
Following gene: 121998806
Centisome position: 83.4
GC content: 68.99
Gene sequence:
>387_bases ATGACTGATTTCCTGCAGGAGCTGATCGCCTCGGTCCTGCTGCTGCTCGGCGGCGGGTTGATGCTCATCGCCGCGGTGGG GCTCTACCGTCTGCCGGATCTGCTCACCCGGATGCACGCCACCACCAAGGCGGGTGCCCTGGGCGCGGCGCTGATCATCG CCGGGGTGGCCGTCCACTTCGCCGACGCCTCGGTGACCGCGCGGGCCGTGGCGATCATTGTCTTCATCGTGCTCACCGCT CCGGTGGCCGCCCACGTGATCGGCCGGGCCGGGTACTTCGTCGGCGTGCCGCTGTGGGACGGGACCATCAAGGACGAGCT GCGCCACCACTACGACCCTGAGACCCACGTCCTGCGCAGCGGCCTTGAGGATCGCGACGAGCGCTAA
Upstream 100 bases:
>100_bases GGGGTCGATGATTTCATCGACGTGGCGATCGTCCTGGCGCTGCTCGCCTTCATGGCCGCCGTGGGGTTCGCCCGCTATCT GGAGAAAGGGGGGCCGCGGG
Downstream 100 bases:
>100_bases TCCTCGCTGCGCCGGCGCGAGGCGAGCCGCTCCAGCGCCTCGCGCAGCGCCGGATCGGTGCTGGTGGCTGCCGCCCGGCG CAGAGTCTCCGACGCCTGGT
Product: monovalent cation/proton antiporter subunit MnhG/PhaG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTDFLQELIASVLLLLGGGLMLIAAVGLYRLPDLLTRMHATTKAGALGAALIIAGVAVHFADASVTARAVAIIVFIVLTA PVAAHVIGRAGYFVGVPLWDGTIKDELRHHYDPETHVLRSGLEDRDER
Sequences:
>Translated_128_residues MTDFLQELIASVLLLLGGGLMLIAAVGLYRLPDLLTRMHATTKAGALGAALIIAGVAVHFADASVTARAVAIIVFIVLTA PVAAHVIGRAGYFVGVPLWDGTIKDELRHHYDPETHVLRSGLEDRDER >Mature_127_residues TDFLQELIASVLLLLGGGLMLIAAVGLYRLPDLLTRMHATTKAGALGAALIIAGVAVHFADASVTARAVAIIVFIVLTAP VAAHVIGRAGYFVGVPLWDGTIKDELRHHYDPETHVLRSGLEDRDER
Specific function: Unknown
COG id: COG1320
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhG subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0091 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005133 [H]
Pfam domain/function: PF03334 PhaG_MnhG_YufB [H]
EC number: NA
Molecular weight: Translated: 13650; Mature: 13519
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFLQELIASVLLLLGGGLMLIAAVGLYRLPDLLTRMHATTKAGALGAALIIAGVAVHF CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADASVTARAVAIIVFIVLTAPVAAHVIGRAGYFVGVPLWDGTIKDELRHHYDPETHVLRS HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCHHHHHHC GLEDRDER CCCCCCCC >Mature Secondary Structure TDFLQELIASVLLLLGGGLMLIAAVGLYRLPDLLTRMHATTKAGALGAALIIAGVAVHF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADASVTARAVAIIVFIVLTAPVAAHVIGRAGYFVGVPLWDGTIKDELRHHYDPETHVLRS HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCHHHHHHC GLEDRDER CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7756693; 11481430 [H]