| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is argJ [H]
Identifier: 121998805
GI number: 121998805
Start: 2228816
End: 2230018
Strand: Reverse
Name: argJ [H]
Synonym: Hhal_2026
Alternate gene names: 121998805
Gene position: 2230018-2228816 (Counterclockwise)
Preceding gene: 121998806
Following gene: 121998804
Centisome position: 83.26
GC content: 73.65
Gene sequence:
>1203_bases ATGTCGGGCGAGGAAGCCGTGATCCATCCGGTGCCGGGGTTCCGGCTCGGTACCGTGAGTGCCGGCATCCGCAAGCCGGG GCGGCCTGATCTGGTGGTCATGGCCTTGCCCCCGGAAGGGCGCGCGGCGGGGGTGTTCACCCGCAATCGCTTCCGCGCCG CTCCGGTCCGCATCGCCGAGCGCCACCTGGCTGCGACCGCGCCGCGTTACCTGCTGGTCAATACCGGCTTCGCCAACGCC GGGACCGGCGAGCGCGGCGAGGCCGACGCCCTGGCCTGCTGCCAGGCCCTGGCTGATCAGGCCGGGTGCGTGCTCGAGGC GGTGGTGCCCTTCTCCACCGGCGTGATCGGTGAGCCCCTCCCCGTCGAGCGCGTCACCGCCGGGATCCCCGGGGCCCTGG ACGCGCTGGACGAGAACGGCTGGCAGGCCGCCGCGGCGGGGATCCAGACCACCGACACCCGCGACAAGATCGCTAGCTAC CAGGTCGACCTCGCCGGCGGGACCTGCACGGTGACCGGGATCGCCAAGGGGGCGGGGATGATCCGCCCGGACATGGCCAC CATGCTGGCCTTCGTGGCCACCGACGCCGATCTCTCCGACGCCGCCCTGGATGCCTCTCTGCGCCGTGCCACCGAGCGCT CCTTCAACCGCGTAACGGTGGACGGCGACACCTCCACCAACGACGCCTGTCTGCTGGCCGCCACCGGTCGCGGCCCGCGG GTGCCCGATCACGGCGGCGACTTCGAGCGCTTCCAGGCGGCCGTCGAGGCGGTCTGCATTGACCTGGCGCGGGCCATCGC CGCCGACGGGGAGGGGGCGACGCGGCTGGTGGATGTGGTCGTCGAGGGGGCGCGGGACACCGCCGAGGCGGAGCGGGTGG CGTTCACCGTGGCGGAGTCGCCGCTGGTCAAGACGGCGCTGGCCGCCGCCGACCCCAACTGGGGGCGGATCCTGGCCGCC GTGGGGCGCGCCGGCCTGGACGACCTCGACGTTGATGCCGTGGCGCTCACCATCGGCGATCAGGTGGTTGCCGAGCACGG CGGCGCCGCGGCGGGCTACGACGAAGCGGCCGCCGCGGCGCACCTCTCCGGCTCCGAGGTGAGGCTCGGCATCGAGCTCG GCCGCGGGCCGGCAGCGGCCACCGTGTGGACCTGCGACTTCACGGCGGAGTACGTCCGCATCAACGCCGAGTATCGAACC TGA
Upstream 100 bases:
>100_bases CAGGAGACGGTGGCCCGGGAAGGCCCGAAGGTCGGGCGCAACGAGTCGTGCCCCTGCGGCTCCGGCAAGAAGTACAAGCA CTGCTGCGGGAAGCTCTAAG
Downstream 100 bases:
>100_bases GCGAGGCCCCGGTGCATACGGCATCGCCCGCCGCGCCGATCCACGTGGCCGCCGCCGTGGTCCGCGGCGAAGACCAGCGC GTACTGGTCCAGTGCCGGCC
Product: arginine biosynthesis bifunctional protein ArgJ
Products: NA
Alternate protein names: Ornithine acetyltransferase; Ornithine transacetylase; OATase [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSGEEAVIHPVPGFRLGTVSAGIRKPGRPDLVVMALPPEGRAAGVFTRNRFRAAPVRIAERHLAATAPRYLLVNTGFANA GTGERGEADALACCQALADQAGCVLEAVVPFSTGVIGEPLPVERVTAGIPGALDALDENGWQAAAAGIQTTDTRDKIASY QVDLAGGTCTVTGIAKGAGMIRPDMATMLAFVATDADLSDAALDASLRRATERSFNRVTVDGDTSTNDACLLAATGRGPR VPDHGGDFERFQAAVEAVCIDLARAIAADGEGATRLVDVVVEGARDTAEAERVAFTVAESPLVKTALAAADPNWGRILAA VGRAGLDDLDVDAVALTIGDQVVAEHGGAAAGYDEAAAAAHLSGSEVRLGIELGRGPAAATVWTCDFTAEYVRINAEYRT
Sequences:
>Translated_400_residues MSGEEAVIHPVPGFRLGTVSAGIRKPGRPDLVVMALPPEGRAAGVFTRNRFRAAPVRIAERHLAATAPRYLLVNTGFANA GTGERGEADALACCQALADQAGCVLEAVVPFSTGVIGEPLPVERVTAGIPGALDALDENGWQAAAAGIQTTDTRDKIASY QVDLAGGTCTVTGIAKGAGMIRPDMATMLAFVATDADLSDAALDASLRRATERSFNRVTVDGDTSTNDACLLAATGRGPR VPDHGGDFERFQAAVEAVCIDLARAIAADGEGATRLVDVVVEGARDTAEAERVAFTVAESPLVKTALAAADPNWGRILAA VGRAGLDDLDVDAVALTIGDQVVAEHGGAAAGYDEAAAAAHLSGSEVRLGIELGRGPAAATVWTCDFTAEYVRINAEYRT >Mature_399_residues SGEEAVIHPVPGFRLGTVSAGIRKPGRPDLVVMALPPEGRAAGVFTRNRFRAAPVRIAERHLAATAPRYLLVNTGFANAG TGERGEADALACCQALADQAGCVLEAVVPFSTGVIGEPLPVERVTAGIPGALDALDENGWQAAAAGIQTTDTRDKIASYQ VDLAGGTCTVTGIAKGAGMIRPDMATMLAFVATDADLSDAALDASLRRATERSFNRVTVDGDTSTNDACLLAATGRGPRV PDHGGDFERFQAAVEAVCIDLARAIAADGEGATRLVDVVVEGARDTAEAERVAFTVAESPLVKTALAAADPNWGRILAAV GRAGLDDLDVDAVALTIGDQVVAEHGGAAAGYDEAAAAAHLSGSEVRLGIELGRGPAAATVWTCDFTAEYVRINAEYRT
Specific function: Unknown
COG id: COG1364
COG function: function code E; N-acetylglutamate synthase (N-acetylornithine aminotransferase)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgJ family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323707, Length=413, Percent_Identity=37.2881355932203, Blast_Score=247, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002813 - InterPro: IPR016117 [H]
Pfam domain/function: PF01960 ArgJ [H]
EC number: =2.3.1.35 [H]
Molecular weight: Translated: 41129; Mature: 40998
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGEEAVIHPVPGFRLGTVSAGIRKPGRPDLVVMALPPEGRAAGVFTRNRFRAAPVRIAE CCCCCEEEECCCCCEEEEEHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHH RHLAATAPRYLLVNTGFANAGTGERGEADALACCQALADQAGCVLEAVVPFSTGVIGEPL HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC PVERVTAGIPGALDALDENGWQAAAAGIQTTDTRDKIASYQVDLAGGTCTVTGIAKGAGM CHHHHHCCCCHHHHHHCCCCCCHHHCCCCCCCCHHHHHEEEEEECCCEEEEEEECCCCCC IRPDMATMLAFVATDADLSDAALDASLRRATERSFNRVTVDGDTSTNDACLLAATGRGPR CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCC VPDHGGDFERFQAAVEAVCIDLARAIAADGEGATRLVDVVVEGARDTAEAERVAFTVAES CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHEEEEECCC PLVKTALAAADPNWGRILAAVGRAGLDDLDVDAVALTIGDQVVAEHGGAAAGYDEAAAAA CHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHHH HLSGSEVRLGIELGRGPAAATVWTCDFTAEYVRINAEYRT CCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEEEECC >Mature Secondary Structure SGEEAVIHPVPGFRLGTVSAGIRKPGRPDLVVMALPPEGRAAGVFTRNRFRAAPVRIAE CCCCEEEECCCCCEEEEEHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHH RHLAATAPRYLLVNTGFANAGTGERGEADALACCQALADQAGCVLEAVVPFSTGVIGEPL HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC PVERVTAGIPGALDALDENGWQAAAAGIQTTDTRDKIASYQVDLAGGTCTVTGIAKGAGM CHHHHHCCCCHHHHHHCCCCCCHHHCCCCCCCCHHHHHEEEEEECCCEEEEEEECCCCCC IRPDMATMLAFVATDADLSDAALDASLRRATERSFNRVTVDGDTSTNDACLLAATGRGPR CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCC VPDHGGDFERFQAAVEAVCIDLARAIAADGEGATRLVDVVVEGARDTAEAERVAFTVAES CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHEEEEECCC PLVKTALAAADPNWGRILAAVGRAGLDDLDVDAVALTIGDQVVAEHGGAAAGYDEAAAAA CHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHHH HLSGSEVRLGIELGRGPAAATVWTCDFTAEYVRINAEYRT CCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]