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The map label for this gene is yabI [H]

Identifier: 121998789

GI number: 121998789

Start: 2213129

End: 2215123

Strand: Reverse

Name: yabI [H]

Synonym: Hhal_2010

Alternate gene names: 121998789

Gene position: 2215123-2213129 (Counterclockwise)

Preceding gene: 121998790

Following gene: 121998784

Centisome position: 82.7

GC content: 72.08

Gene sequence:

>1995_bases
ATGGATCTCACCTGGATTACGGGGGTGCTCGACTGGGTGGCCGCTCACCCGGGGTGGGCCACCCTGGTCATCTTCCTCAT
CGCCCTTTGCGAGGGGGTGGTGGTGGCCGGTCTGATCGTCCCCGGAGCCACCCTGCTCTTCTTCGCCGGTGCCCTGGTGG
GGACGGGGCACCTGGAGCTGGGGCCGAGCCTGATCGCCGCTTTCACGGGCGCCTTCATTGGCGACTCCATCAGCTATTGG
CTGGGTCGTCACTTCGGCGACCGCCTGCGGACCTACTGGCCCCTGCGTCGCTATCCCGGTGCCCTCGCCAAGGGGGACGC
CTTCTTCGCCGCCCACGGGGGCAAGAGCCTGTTCTTCGGGCGCTTCGTCGGCCCGCTGCGGGGCATCATCCCGGCGATTG
CCGGCATGATGAGCATGCCCCCGCGCCCCTTCCTGGTGGTCAATCTGATCTCCGCGGTGCTCTGGGCGCCGGCCTATCTG
CTGCCCGGTATGGTTTTCGGGGCCTCGTTGGCGGTGGCCGCCTCGGTTTCGCTGCGCCTGGGTGCCCTGCTGCTGATCGC
GCTGGTCGTGCTGTGGGTGGGGTGGTGGCTGGCGCGCCACCTGCTCGCGCCGCGGCTGCGTCGGGCGGCGGCCCTGATCG
CCTGGCGAGCCCGTGCCTGGGGGCGTGTCCATCCGGTGGCAGCCCAGGTGCTCAGCGGTCCCCGTTACGCCCTGCGTGCC
TTTAGTTACGGCGCCGGGTGGATCTGGTGGGCGGCGCTGGCCGCCCTGACGGTGCTGACGCTCTACCAGGGCTGGTGGGG
CGGGCCGACGCTGGTCGACGAGGCGGTGCTGGCGGTGCTCATGAGCGAGCTGGATACCGGTCTGAGGGCCCTGTTCGTCA
TGCCGGCGCTGCTCCTTGAGCCCCAGGCCTGGGTGCCGGCGTGGCTGGCCGGGGTGGCCTGGGTGGCTTGGGGCGGGCGG
TTGCGCGTGGCGCTGGTACTGGGCCTGATCGTGCCCGCGGCGGCCCTGCTGGCGATGCTGCTCGGCATGGTGAGCGGCAA
CTGGAGCGCCGTCGCGCTCTACCGCGGGGCGCCGCCGCTGGGCTTCCCGTCGCCGGCGCTGGCGGGGTTTACCACGCTGG
TCCTCGCCTCGGGTGTCCTGGCCACGGTGGCCTACGGTCCGCTACGGCGCCCGGTGCAGGTGGTGGGGGTGGCGATTCCG
CTGCTGGCCGCCATCGGCGGCGTGGTGGTCGGTGACCTGTGGCTGGCGGATGCGCTGGGTGGTCTGCTCCTCGGCGTGGT
CATTGCCGGGCTGGTGGTCCTGGCCCGCAGCGCCTCGCAGCGGCGCCTGCCGGAACGGACCCTGCCGGCCATCGTGGCCT
TGGTCCTGGTGGGGGCCGTGGCGGTGAAGGCGGCCCTGATCCTCCCGCAGGAGCGGGAACGCTTCGTGGCCCAGGCCGAT
CCGCCGCAGCTGACGGTGGCCGAGTGGCTGGAGGTGGGGCCGGCGCATCCGTTCGGGCGGGAGCTGCGCTGGCTCGACGG
GGGGCGTCGGGCGGTGGATCTGCAGTGGTTGGCGGAGCCTGAGGCGCTGGTGGCGCGTCTGGACGACGCCGGCTGGTACG
AGCCCGAGCGCCGTCTCTACGGGGCGTTGCGCTGGCTGCAGCCTGAGCCGGACCTCTATCGGATGGCGCCGCTGCCGCGC
TGGTACCGTGGGCGGCTGCCGGCGCTGATTCGAGTGATCCCGGCGGATGAGCAGCGGCGGTTGGTGCTGCGATTGTGGCC
GGCGCCGATGACCGTGGTCGGTGAGGCGGCCTCGGTGTGGCTGGTCAGCCTGGAAGTGGAACAGGTCCACAGCGGTTGGC
CGTTGGCGGCGATCCAGGCCCGGGGGGTTACCCCCGGCGAGCGGGTCCGTGTGGTGGAAGAGCTGCTGGCTACCGGGGAT
CTGCGCATCGTGGAGCCGGCTCAGCCGATCCGCATCCTACCGGTGGATGCCCTGACCGGTGATCGTGCCCGCTGA

Upstream 100 bases:

>100_bases
CCTGGTATCCGACGATCCGGCGGGGCTGCGGCCCCTCCGGATTTTTTTTCTGCGGCCGGGCTGCGCCCATGCGGCTACTG
ACGGCTTAGAGCGCTGACGG

Downstream 100 bases:

>100_bases
CGGCCCCGGGCGATGCCCCCCCCGCCGCAGCCGGGGCCTGACGCGCGCGCCTCGCCTGACGGCGAGGTCCCCTGCGCGGC
TCATCCCGGCGGGGCCGCTC

Product: PA-phosphatase-like phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MDLTWITGVLDWVAAHPGWATLVIFLIALCEGVVVAGLIVPGATLLFFAGALVGTGHLELGPSLIAAFTGAFIGDSISYW
LGRHFGDRLRTYWPLRRYPGALAKGDAFFAAHGGKSLFFGRFVGPLRGIIPAIAGMMSMPPRPFLVVNLISAVLWAPAYL
LPGMVFGASLAVAASVSLRLGALLLIALVVLWVGWWLARHLLAPRLRRAAALIAWRARAWGRVHPVAAQVLSGPRYALRA
FSYGAGWIWWAALAALTVLTLYQGWWGGPTLVDEAVLAVLMSELDTGLRALFVMPALLLEPQAWVPAWLAGVAWVAWGGR
LRVALVLGLIVPAAALLAMLLGMVSGNWSAVALYRGAPPLGFPSPALAGFTTLVLASGVLATVAYGPLRRPVQVVGVAIP
LLAAIGGVVVGDLWLADALGGLLLGVVIAGLVVLARSASQRRLPERTLPAIVALVLVGAVAVKAALILPQERERFVAQAD
PPQLTVAEWLEVGPAHPFGRELRWLDGGRRAVDLQWLAEPEALVARLDDAGWYEPERRLYGALRWLQPEPDLYRMAPLPR
WYRGRLPALIRVIPADEQRRLVLRLWPAPMTVVGEAASVWLVSLEVEQVHSGWPLAAIQARGVTPGERVRVVEELLATGD
LRIVEPAQPIRILPVDALTGDRAR

Sequences:

>Translated_664_residues
MDLTWITGVLDWVAAHPGWATLVIFLIALCEGVVVAGLIVPGATLLFFAGALVGTGHLELGPSLIAAFTGAFIGDSISYW
LGRHFGDRLRTYWPLRRYPGALAKGDAFFAAHGGKSLFFGRFVGPLRGIIPAIAGMMSMPPRPFLVVNLISAVLWAPAYL
LPGMVFGASLAVAASVSLRLGALLLIALVVLWVGWWLARHLLAPRLRRAAALIAWRARAWGRVHPVAAQVLSGPRYALRA
FSYGAGWIWWAALAALTVLTLYQGWWGGPTLVDEAVLAVLMSELDTGLRALFVMPALLLEPQAWVPAWLAGVAWVAWGGR
LRVALVLGLIVPAAALLAMLLGMVSGNWSAVALYRGAPPLGFPSPALAGFTTLVLASGVLATVAYGPLRRPVQVVGVAIP
LLAAIGGVVVGDLWLADALGGLLLGVVIAGLVVLARSASQRRLPERTLPAIVALVLVGAVAVKAALILPQERERFVAQAD
PPQLTVAEWLEVGPAHPFGRELRWLDGGRRAVDLQWLAEPEALVARLDDAGWYEPERRLYGALRWLQPEPDLYRMAPLPR
WYRGRLPALIRVIPADEQRRLVLRLWPAPMTVVGEAASVWLVSLEVEQVHSGWPLAAIQARGVTPGERVRVVEELLATGD
LRIVEPAQPIRILPVDALTGDRAR
>Mature_664_residues
MDLTWITGVLDWVAAHPGWATLVIFLIALCEGVVVAGLIVPGATLLFFAGALVGTGHLELGPSLIAAFTGAFIGDSISYW
LGRHFGDRLRTYWPLRRYPGALAKGDAFFAAHGGKSLFFGRFVGPLRGIIPAIAGMMSMPPRPFLVVNLISAVLWAPAYL
LPGMVFGASLAVAASVSLRLGALLLIALVVLWVGWWLARHLLAPRLRRAAALIAWRARAWGRVHPVAAQVLSGPRYALRA
FSYGAGWIWWAALAALTVLTLYQGWWGGPTLVDEAVLAVLMSELDTGLRALFVMPALLLEPQAWVPAWLAGVAWVAWGGR
LRVALVLGLIVPAAALLAMLLGMVSGNWSAVALYRGAPPLGFPSPALAGFTTLVLASGVLATVAYGPLRRPVQVVGVAIP
LLAAIGGVVVGDLWLADALGGLLLGVVIAGLVVLARSASQRRLPERTLPAIVALVLVGAVAVKAALILPQERERFVAQAD
PPQLTVAEWLEVGPAHPFGRELRWLDGGRRAVDLQWLAEPEALVARLDDAGWYEPERRLYGALRWLQPEPDLYRMAPLPR
WYRGRLPALIRVIPADEQRRLVLRLWPAPMTVVGEAASVWLVSLEVEQVHSGWPLAAIQARGVTPGERVRVVEELLATGD
LRIVEPAQPIRILPVDALTGDRAR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1786252, Length=181, Percent_Identity=36.4640883977901, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788656, Length=184, Percent_Identity=32.0652173913043, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 71433; Mature: 71433

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure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CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]