The gene/protein map for NC_008789 is currently unavailable.
Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998783

Identifier: 121998783

GI number: 121998783

Start: 2208630

End: 2208971

Strand: Reverse

Name: 121998783

Synonym: Hhal_2004

Alternate gene names: NA

Gene position: 2208971-2208630 (Counterclockwise)

Preceding gene: 121998784

Following gene: 121998782

Centisome position: 82.47

GC content: 68.13

Gene sequence:

>342_bases
ATGGCTCGCGCCCTTACGGCAGAGCGACTCGAGTGCGAGAACGCCACGTTCCACGGGACCGGTGGGGTCAGTGCCTGCAA
TCGGGATCACGGTTTCCGGCCGGCCTTCCTCGATACGGAGACGGGGACGATCTACCTCTCCTGCAACCGGAGCGGGCAGC
CGGCCCCCTTCCATCGCCTCGACGGTCTGCCCGAAGAGCTGATCAGCGAGCGCGATGACCGCGGCCGGGTGATCGCGGTG
AGGCAGCGCGTGGTCTCGGGGTTCGAGCGCGATGGCTGCTTCTACACCCGTGAGCAGGCCGCCTGCTTCGTGGTCCCGCC
CACTCCGCGACAAGGCTCCTGA

Upstream 100 bases:

>100_bases
ACCAGAATCAGTAGCAGCGCAGGAGCGTTGCCCGGCTCAGGGGGCCAGCGGAGCGGCCGATCACCCTTGAAGCGGTATCG
ACGTTCGGAGGTGGTGAGCG

Downstream 100 bases:

>100_bases
CTCGTGGCGCAGTTGCAAGTCACGCTGGAGGTGGCGGCCGGCGACCTCGACGCCGTGGATGGCGCACTGGAGTTGGCCGG
GGCGCTGTCCCAGACCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MARALTAERLECENATFHGTGGVSACNRDHGFRPAFLDTETGTIYLSCNRSGQPAPFHRLDGLPEELISERDDRGRVIAV
RQRVVSGFERDGCFYTREQAACFVVPPTPRQGS

Sequences:

>Translated_113_residues
MARALTAERLECENATFHGTGGVSACNRDHGFRPAFLDTETGTIYLSCNRSGQPAPFHRLDGLPEELISERDDRGRVIAV
RQRVVSGFERDGCFYTREQAACFVVPPTPRQGS
>Mature_112_residues
ARALTAERLECENATFHGTGGVSACNRDHGFRPAFLDTETGTIYLSCNRSGQPAPFHRLDGLPEELISERDDRGRVIAVR
QRVVSGFERDGCFYTREQAACFVVPPTPRQGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12502; Mature: 12371

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARALTAERLECENATFHGTGGVSACNRDHGFRPAFLDTETGTIYLSCNRSGQPAPFHRL
CCCCCCCCHHCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHH
DGLPEELISERDDRGRVIAVRQRVVSGFERDGCFYTREQAACFVVPPTPRQGS
CCCCHHHHCCCCCCCCEEEEHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCC
>Mature Secondary Structure 
ARALTAERLECENATFHGTGGVSACNRDHGFRPAFLDTETGTIYLSCNRSGQPAPFHRL
CCCCCCCHHCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHH
DGLPEELISERDDRGRVIAVRQRVVSGFERDGCFYTREQAACFVVPPTPRQGS
CCCCHHHHCCCCCCCCEEEEHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA