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The map label for this gene is ribF [H]

Identifier: 121998616

GI number: 121998616

Start: 2009200

End: 2010135

Strand: Reverse

Name: ribF [H]

Synonym: Hhal_1837

Alternate gene names: 121998616

Gene position: 2010135-2009200 (Counterclockwise)

Preceding gene: 121998617

Following gene: 121998615

Centisome position: 75.05

GC content: 71.15

Gene sequence:

>936_bases
ATGGAACTCATCCGGGGATTGCATAACGTCCGGGCGTGTCACCGCGGTGCGGCGATCACCATCGGCAACTTCGATGGGGT
CCACCGTGGCCACCGGGCCATGATCGACCGGCTGCGCGAGGAGGCGGCGCGGCGCGGTTGCCCGGCCGTGGTGGTCACCT
TCGAGCCGCACCCGATGGAGCGCCTGGCCCCGGCGCGGGCGCCGGCGCGGCTGACCGGGCTGCGAGAGAAGGTGCGCCGG
CTTGGGGAGACCGGCGTCGATGCGGTCCTCTGTCTGCGCTTCGATCAGCATCTGGCGGCGGTGGAGGCCGAGGCCTTCGC
CGGCGAGCTGCTCGGTGGGCGACTCGGCGCCGGATTCGTACTGGTCGGTGACGATTTTCGATTCGGCCGCCAGCGGCGCG
GCGACCTGGAGATGCTCCGGCGTGCCGGGGAGGCGTGGGGCTATGAGGTCGCGCCCATGGAGACGGTCACCCGTTCCGGA
GAACGAGTCAGCAGTACCCGCATCCGCGAGGCCGTGCGGGCGGGCCGCTTTGCCGAGGCGGCGGAGCTGCTGGGCCATCC
TTACTGTATCCAGGGGCGTGTGGTCCACGGTGACGCCATGGGGCGACAGCTGGGGTGGCCGACGGCCAACCTGCGGCTAT
CACCGGAACGCATCCCCCTCGATGGGATCTACGCCGGGTGGGCTCGGGGGGGTACCGAGCAGCCGTGGCCGACGGCCATC
AGCGTTGGCATCCGACCCACGGTCGGGGGGCGGCGCACGGTCTTCGAGGCCCACCTGATCGACTTCGACGGCGACCTGTA
TGGCCGCCACCTCTGCGTCGAGCCGGTGGTCCGGCTCCGCGGCGAGGCGCACTTCGACGGGCTCGATGCGTTGGCACGAC
AGATCGGCGAGGACGTACGCGCGGCGCGGCGCGTGCTCGGTCAAGAACACCACTAG

Upstream 100 bases:

>100_bases
TCCGTGAACCGCCGGCGCCGGCGCCGGAGGCGGCTGGCGAGTCGGGCGGCTAGCCGAGCCTGTTGCCGGGCTAGTACACT
TGATCCTTTTCTCAGGGACC

Downstream 100 bases:

>100_bases
ACGAGGCGGCGACGTGAGCGAGTACAAGCACACCCTCAACCTTCCCCACACCGAGTTCCCGATGCGGGCGCGCCTGGCCG
AGCGCGAGCCCCAGCGTCTG

Product: riboflavin biosynthesis protein RibF

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MELIRGLHNVRACHRGAAITIGNFDGVHRGHRAMIDRLREEAARRGCPAVVVTFEPHPMERLAPARAPARLTGLREKVRR
LGETGVDAVLCLRFDQHLAAVEAEAFAGELLGGRLGAGFVLVGDDFRFGRQRRGDLEMLRRAGEAWGYEVAPMETVTRSG
ERVSSTRIREAVRAGRFAEAAELLGHPYCIQGRVVHGDAMGRQLGWPTANLRLSPERIPLDGIYAGWARGGTEQPWPTAI
SVGIRPTVGGRRTVFEAHLIDFDGDLYGRHLCVEPVVRLRGEAHFDGLDALARQIGEDVRAARRVLGQEHH

Sequences:

>Translated_311_residues
MELIRGLHNVRACHRGAAITIGNFDGVHRGHRAMIDRLREEAARRGCPAVVVTFEPHPMERLAPARAPARLTGLREKVRR
LGETGVDAVLCLRFDQHLAAVEAEAFAGELLGGRLGAGFVLVGDDFRFGRQRRGDLEMLRRAGEAWGYEVAPMETVTRSG
ERVSSTRIREAVRAGRFAEAAELLGHPYCIQGRVVHGDAMGRQLGWPTANLRLSPERIPLDGIYAGWARGGTEQPWPTAI
SVGIRPTVGGRRTVFEAHLIDFDGDLYGRHLCVEPVVRLRGEAHFDGLDALARQIGEDVRAARRVLGQEHH
>Mature_311_residues
MELIRGLHNVRACHRGAAITIGNFDGVHRGHRAMIDRLREEAARRGCPAVVVTFEPHPMERLAPARAPARLTGLREKVRR
LGETGVDAVLCLRFDQHLAAVEAEAFAGELLGGRLGAGFVLVGDDFRFGRQRRGDLEMLRRAGEAWGYEVAPMETVTRSG
ERVSSTRIREAVRAGRFAEAAELLGHPYCIQGRVVHGDAMGRQLGWPTANLRLSPERIPLDGIYAGWARGGTEQPWPTAI
SVGIRPTVGGRRTVFEAHLIDFDGDLYGRHLCVEPVVRLRGEAHFDGLDALARQIGEDVRAARRVLGQEHH

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Homo sapiens, GI269973877, Length=134, Percent_Identity=36.5671641791045, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1786208, Length=308, Percent_Identity=48.3766233766234, Blast_Score=291, Evalue=4e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 34296; Mature: 34296

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIRGLHNVRACHRGAAITIGNFDGVHRGHRAMIDRLREEAARRGCPAVVVTFEPHPME
CHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
RLAPARAPARLTGLREKVRRLGETGVDAVLCLRFDQHLAAVEAEAFAGELLGGRLGAGFV
HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
LVGDDFRFGRQRRGDLEMLRRAGEAWGYEVAPMETVTRSGERVSSTRIREAVRAGRFAEA
EECCCCCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHH
AELLGHPYCIQGRVVHGDAMGRQLGWPTANLRLSPERIPLDGIYAGWARGGTEQPWPTAI
HHHHCCCEEEECEEEECHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCEE
SVGIRPTVGGRRTVFEAHLIDFDGDLYGRHLCVEPVVRLRGEAHFDGLDALARQIGEDVR
EECCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
AARRVLGQEHH
HHHHHHCCCCC
>Mature Secondary Structure
MELIRGLHNVRACHRGAAITIGNFDGVHRGHRAMIDRLREEAARRGCPAVVVTFEPHPME
CHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
RLAPARAPARLTGLREKVRRLGETGVDAVLCLRFDQHLAAVEAEAFAGELLGGRLGAGFV
HHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
LVGDDFRFGRQRRGDLEMLRRAGEAWGYEVAPMETVTRSGERVSSTRIREAVRAGRFAEA
EECCCCCCCHHCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHH
AELLGHPYCIQGRVVHGDAMGRQLGWPTANLRLSPERIPLDGIYAGWARGGTEQPWPTAI
HHHHCCCEEEECEEEECHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCEE
SVGIRPTVGGRRTVFEAHLIDFDGDLYGRHLCVEPVVRLRGEAHFDGLDALARQIGEDVR
EECCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
AARRVLGQEHH
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]