| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is folC [H]
Identifier: 121998580
GI number: 121998580
Start: 1972853
End: 1974157
Strand: Reverse
Name: folC [H]
Synonym: Hhal_1801
Alternate gene names: 121998580
Gene position: 1974157-1972853 (Counterclockwise)
Preceding gene: 121998581
Following gene: 121998579
Centisome position: 73.71
GC content: 71.34
Gene sequence:
>1305_bases ATGAACGGTGCCCGCAGGCCGCAGCCGGCCGCTCCGCCAGATCTTGAGGGTTGGCTGGCCCGACTGGAAGCGGCTCACCC GACGGCCATCGACCTCGGTCTGGAGCGCGTGGCCGCCGTGGGCCTGCGCCTTGGTGTCCTCGCCCCGGCGGCGCGGGTGG TTACGGTCGGTGGGACCAACGGCAAGGGGAGTGTGGCGCGGACCCTGGAGGCGCTGCTGCGCGGTCTCGGGGTGAGCACA GCCCTCTACACCTCGCCCCATTTCCAGCGCTTTAACGAGCGGATGCGCCTCGACGGGGTCGAGGTGGCCGATGCCCCATT GGTCAAGGCGCTGGGCCGGGTCGAGGAGGCCCGGGGCGACGCTGACGTCAGTCTGACCTATTTCGAGCATACGACCCTGG CCGCCTTCGATCTCTTTGCGCGCAGCGGTGCTCGGGTCTGGATCCTGGAGGTGGGGCTGGGCGGGCGGCTGGACGCTGTG AACGCCATCGACGCGGATGTGGCGGTGGTCACCCGGATTGCCCGCGACCACGCCGAATTCCTCGGCGACGACCTGCAGGC GATTGCCGCCGAGAAGGCCGGCATCTTCCGCAAGGGGCGACCGGCGGTGATCGGTCAGCAGGACGCCCCGGCGGCGCTGC GTCAGTCGGCGCTGGAGGTCGGCGCCGAGGTCGCGCAGGCCGGGGTGGAGTGGACGTTCTCCGCCGAGGCCGACGGGCGC TGGTGGTGGCGCTGTGGCGAGTACCACTGGGGGGGGCTGCCGGCCTCGGGGATCCCGGGGTGCGCTGCGCGCGGCAACGT GGCTACCGCCTTGGCCGCCCTCGTTCAGCTGCCGGAGGCGGTTGGCGTGGACGCGGCGGCCGTCGCCAGGCTCCTGGATG GGGTGCGGGTGCCCGGGCGTCTGGAGCGGATCGAGGCCGGGTCACTGGAGTGGCTGTTGGATGTCGCGCATAATGCCGAT GGTGCGGAGGAGCTCGCCCGGGTGCTGGATGACCGAACGGTCACCGGGCAAACGCGAGCCCTCTTCGCCGTGGCGGCGCG CAAGGATGCCCGGGCATTGGTCGCGGCGTTGAGTGGTCGGATCGACGCCTGGTACCTGCCGCAGCTGGATGAGCCGGATA TGCGCAACGCCGATGAACTGGCCAGCCAGCTTGCCGACGCGGGTGAGTCGGTGGTGCACTGCGGTGACGGGGTGGCGACC ACCCTGGCCGCTCTCCAGGGCCAGGCCGGGCCCGGCGATCGGGTTGTGGTCTTTGGCTCCTTCCGCACTGTGGCCGCCGT ACAAGCGCAGCAAGGCTGGGGGTAG
Upstream 100 bases:
>100_bases AGAGCGCAGAGCCCGAGGCGCCGGCCGAGGAGGCCGGGCCCGCTGGGGCGGCGGGGGATCAGGCTGGTGAGAGCCAGGAC GAGGGCGACCCCCGCAACGC
Downstream 100 bases:
>100_bases GCGATGGATCCAAGCACGAAACGACAGTTGGTTGGGGCCGCGGTCCTGGTCGCCCTGGCCGTGATCTTCCTGCCGATGAT CTTCTCCGGCTCCGATGAGG
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpolyglutamate synthase; Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase; Dihydrofolate synthase [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MNGARRPQPAAPPDLEGWLARLEAAHPTAIDLGLERVAAVGLRLGVLAPAARVVTVGGTNGKGSVARTLEALLRGLGVST ALYTSPHFQRFNERMRLDGVEVADAPLVKALGRVEEARGDADVSLTYFEHTTLAAFDLFARSGARVWILEVGLGGRLDAV NAIDADVAVVTRIARDHAEFLGDDLQAIAAEKAGIFRKGRPAVIGQQDAPAALRQSALEVGAEVAQAGVEWTFSAEADGR WWWRCGEYHWGGLPASGIPGCAARGNVATALAALVQLPEAVGVDAAAVARLLDGVRVPGRLERIEAGSLEWLLDVAHNAD GAEELARVLDDRTVTGQTRALFAVAARKDARALVAALSGRIDAWYLPQLDEPDMRNADELASQLADAGESVVHCGDGVAT TLAALQGQAGPGDRVVVFGSFRTVAAVQAQQGWG
Sequences:
>Translated_434_residues MNGARRPQPAAPPDLEGWLARLEAAHPTAIDLGLERVAAVGLRLGVLAPAARVVTVGGTNGKGSVARTLEALLRGLGVST ALYTSPHFQRFNERMRLDGVEVADAPLVKALGRVEEARGDADVSLTYFEHTTLAAFDLFARSGARVWILEVGLGGRLDAV NAIDADVAVVTRIARDHAEFLGDDLQAIAAEKAGIFRKGRPAVIGQQDAPAALRQSALEVGAEVAQAGVEWTFSAEADGR WWWRCGEYHWGGLPASGIPGCAARGNVATALAALVQLPEAVGVDAAAVARLLDGVRVPGRLERIEAGSLEWLLDVAHNAD GAEELARVLDDRTVTGQTRALFAVAARKDARALVAALSGRIDAWYLPQLDEPDMRNADELASQLADAGESVVHCGDGVAT TLAALQGQAGPGDRVVVFGSFRTVAAVQAQQGWG >Mature_434_residues MNGARRPQPAAPPDLEGWLARLEAAHPTAIDLGLERVAAVGLRLGVLAPAARVVTVGGTNGKGSVARTLEALLRGLGVST ALYTSPHFQRFNERMRLDGVEVADAPLVKALGRVEEARGDADVSLTYFEHTTLAAFDLFARSGARVWILEVGLGGRLDAV NAIDADVAVVTRIARDHAEFLGDDLQAIAAEKAGIFRKGRPAVIGQQDAPAALRQSALEVGAEVAQAGVEWTFSAEADGR WWWRCGEYHWGGLPASGIPGCAARGNVATALAALVQLPEAVGVDAAAVARLLDGVRVPGRLERIEAGSLEWLLDVAHNAD GAEELARVLDDRTVTGQTRALFAVAARKDARALVAALSGRIDAWYLPQLDEPDMRNADELASQLADAGESVVHCGDGVAT TLAALQGQAGPGDRVVVFGSFRTVAAVQAQQGWG
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=369, Percent_Identity=29.2682926829268, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI66932984, Length=369, Percent_Identity=29.2682926829268, Blast_Score=125, Evalue=9e-29, Organism=Escherichia coli, GI1788654, Length=424, Percent_Identity=41.2735849056604, Blast_Score=266, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17553148, Length=156, Percent_Identity=37.8205128205128, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71984923, Length=156, Percent_Identity=37.8205128205128, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17553150, Length=156, Percent_Identity=37.8205128205128, Blast_Score=111, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6323760, Length=357, Percent_Identity=27.1708683473389, Blast_Score=124, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6324815, Length=333, Percent_Identity=25.5255255255255, Blast_Score=93, Evalue=7e-20, Organism=Drosophila melanogaster, GI24641571, Length=289, Percent_Identity=29.0657439446367, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI24581568, Length=198, Percent_Identity=30.8080808080808, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17; =6.3.2.12 [H]
Molecular weight: Translated: 45533; Mature: 45533
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGARRPQPAAPPDLEGWLARLEAAHPTAIDLGLERVAAVGLRLGVLAPAARVVTVGGTN CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC GKGSVARTLEALLRGLGVSTALYTSPHFQRFNERMRLDGVEVADAPLVKALGRVEEARGD CCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC ADVSLTYFEHTTLAAFDLFARSGARVWILEVGLGGRLDAVNAIDADVAVVTRIARDHAEF CCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHH LGDDLQAIAAEKAGIFRKGRPAVIGQQDAPAALRQSALEVGAEVAQAGVEWTFSAEADGR HHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC WWWRCGEYHWGGLPASGIPGCAARGNVATALAALVQLPEAVGVDAAAVARLLDGVRVPGR EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCH LERIEAGSLEWLLDVAHNADGAEELARVLDDRTVTGQTRALFAVAARKDARALVAALSGR HHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC IDAWYLPQLDEPDMRNADELASQLADAGESVVHCGDGVATTLAALQGQAGPGDRVVVFGS CCEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCEEEEEEC FRTVAAVQAQQGWG CHHHHHHHHHCCCC >Mature Secondary Structure MNGARRPQPAAPPDLEGWLARLEAAHPTAIDLGLERVAAVGLRLGVLAPAARVVTVGGTN CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC GKGSVARTLEALLRGLGVSTALYTSPHFQRFNERMRLDGVEVADAPLVKALGRVEEARGD CCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC ADVSLTYFEHTTLAAFDLFARSGARVWILEVGLGGRLDAVNAIDADVAVVTRIARDHAEF CCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHH LGDDLQAIAAEKAGIFRKGRPAVIGQQDAPAALRQSALEVGAEVAQAGVEWTFSAEADGR HHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC WWWRCGEYHWGGLPASGIPGCAARGNVATALAALVQLPEAVGVDAAAVARLLDGVRVPGR EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCH LERIEAGSLEWLLDVAHNADGAEELARVLDDRTVTGQTRALFAVAARKDARALVAALSGR HHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC IDAWYLPQLDEPDMRNADELASQLADAGESVVHCGDGVATTLAALQGQAGPGDRVVVFGS CCEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCEEEEEEC FRTVAAVQAQQGWG CHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3040739; 3040734; 9205837; 9278503; 1989505 [H]