Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998552

Identifier: 121998552

GI number: 121998552

Start: 1946449

End: 1946946

Strand: Reverse

Name: 121998552

Synonym: Hhal_1773

Alternate gene names: NA

Gene position: 1946946-1946449 (Counterclockwise)

Preceding gene: 121998553

Following gene: 121998550

Centisome position: 72.69

GC content: 69.68

Gene sequence:

>498_bases
GTGCGGGCTGGCTGTGGAGGTGCGGTGCTGATCCGCGCCGCAGAGCGGGTAATGTTGACGGTGCTGGCCGGCGCGCTGTG
GAGCGGTGGCTACATCGTCTCTCCGCTGCTGTTCCGCACCCTGGAAGACACCGCGCAGGCGGCGGCATTGGTTGGCGAGG
TCACCGGGACGGCGGTCTGGGTGGTGCTGGTCTGTGCTGCGCTGCTGATCGCGACTCAGCTGCGCCACCGGATTCGTCCG
CTGGCCGCACACTGGCGCCTTTGGCTGCTGGTGCTGCTGACCGTGGTGGTGGCCGTGGGGGAGTTCTGGGTCCGGCCGCC
AATGGCGGCGTTGACCGAGCAGGCCGGCGAGGTCGGGTACCTCTCGGCCCTGCGCGCCGCCGAGAGCCTTTACATGGTCG
CTAGCGCCATGGCACTGGTCCTGGTCGCCGGCGGAATCGAGCCGCGGCAACCGGAAGAAGGCGAAGAGACACCGAGCAGC
GAGGATGCCGGCCGCTGA

Upstream 100 bases:

>100_bases
CCTGATCGGCAAGGAGGAGGGTGACGAGGCTGTGGTTCAGGCCCCGGGCGGAGAGCGGACCTACGAGATCGTCGAGGTTC
GGTATGAATAGTCCCGGACG

Downstream 100 bases:

>100_bases
GCGGCTAGATCAGGACTTGGCTCTTCTCGGGGTTTTCCTGGTAGAGGAGCACGATGCGCCCGATGGTCTGCACCACGACG
GCGCCGGTCTGCTCTGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRAGCGGAVLIRAAERVMLTVLAGALWSGGYIVSPLLFRTLEDTAQAAALVGEVTGTAVWVVLVCAALLIATQLRHRIRP
LAAHWRLWLLVLLTVVVAVGEFWVRPPMAALTEQAGEVGYLSALRAAESLYMVASAMALVLVAGGIEPRQPEEGEETPSS
EDAGR

Sequences:

>Translated_165_residues
MRAGCGGAVLIRAAERVMLTVLAGALWSGGYIVSPLLFRTLEDTAQAAALVGEVTGTAVWVVLVCAALLIATQLRHRIRP
LAAHWRLWLLVLLTVVVAVGEFWVRPPMAALTEQAGEVGYLSALRAAESLYMVASAMALVLVAGGIEPRQPEEGEETPSS
EDAGR
>Mature_165_residues
MRAGCGGAVLIRAAERVMLTVLAGALWSGGYIVSPLLFRTLEDTAQAAALVGEVTGTAVWVVLVCAALLIATQLRHRIRP
LAAHWRLWLLVLLTVVVAVGEFWVRPPMAALTEQAGEVGYLSALRAAESLYMVASAMALVLVAGGIEPRQPEEGEETPSS
EDAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17475; Mature: 17475

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGCGGAVLIRAAERVMLTVLAGALWSGGYIVSPLLFRTLEDTAQAAALVGEVTGTAVW
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLVCAALLIATQLRHRIRPLAAHWRLWLLVLLTVVVAVGEFWVRPPMAALTEQAGEVGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
LSALRAAESLYMVASAMALVLVAGGIEPRQPEEGEETPSSEDAGR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAGCGGAVLIRAAERVMLTVLAGALWSGGYIVSPLLFRTLEDTAQAAALVGEVTGTAVW
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLVCAALLIATQLRHRIRPLAAHWRLWLLVLLTVVVAVGEFWVRPPMAALTEQAGEVGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
LSALRAAESLYMVASAMALVLVAGGIEPRQPEEGEETPSSEDAGR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA