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The map label for this gene is ycgB [H]

Identifier: 121998470

GI number: 121998470

Start: 1845222

End: 1846781

Strand: Reverse

Name: ycgB [H]

Synonym: Hhal_1691

Alternate gene names: 121998470

Gene position: 1846781-1845222 (Counterclockwise)

Preceding gene: 121998471

Following gene: 121998469

Centisome position: 68.95

GC content: 63.21

Gene sequence:

>1560_bases
ATGGCACCGAACGCGGCGGTTCAGCAGCAACCCCTGTTCACCGGTCTGGACTGGGACTATCGCGATGTGATGCGCGTCTA
CGATGCCGTCGAGCAGATCGCACAGGACGAGCTGAAACTCGATATCTACCCCAATCAGATCGAGGTCATTAGCTCCGAGC
AGATGCTCGATGCCTACGCCTCGATGGGCATGCCGCTGTTCTATCGGCACTGGTCGTTCGGCAAGCACTTCGCCCGGGAC
GAGATGCTCTACCGCAAGGGGTACACCGGCCTCGCCTACGAGATCGTCATCAACTCCAAGCCGTGTATCTCCTACATCAT
GGAGGAGAACACGCTCACCATGCAGACGCTGGTGGTGGCCCACGCTGCCTTCGGCCACAACCACTTCTTCAAGAACAACC
GGCTCTTCCGGGAGTGGACCGATGCTGAGGGCATCCTCGACTACCTGGATTTCGCCAAGGGGTACATCGCAGAGTGTGAA
GAGCGCTACGGGGTGGAGGCGGTCGAGCGGGTACTCGACGCCGCCCACGCTTTGATGAGCCAGGGGGTGCACCGCTACCC
CAAGCCGCAGACGCGTAGCCTGCGGGAGGAGCGCGACCGCGAGATCGAGCGGATTCGCTACGAAGAGCAGACCTACAACG
ATCTCTGGCGCACGGTGCCCACGGATCCGGACGGAGAAAGGCCCGGTGGGGCTGATCCGGTGGAAATGCGGATGCAGCGG
CTCGGATTGCCGGAAGAGAACCTCCTGTACTTCTTGGAGAAGCGGGCCCCGCGCCTAGAGCACTGGCAGCGGGAGGTGCT
GCGCATCGTGCGTAATGTGGCGCAGTACTTCTATCCGCAGAAACAGACCAAGGTGATGAACGAAGGCTGCGCGACGGCGG
TGCACTACTACATCATGAACCGGCTGCACGAAAACGGGCAGCTGACCGACGGGGCTTTCCTGGAGTTCCTGCACAGCCAC
ACCAGCGTCGTATTCCAGCCGGAGTTCGATGATCCGCGTTACTCCGGCATCAACCCCTACGCCCTCGGGTTCGCCATCCT
CGAGGATCTACGCCGCATGGCCACCGACCCGACCGCGGAGGATCGGCGCTGGTTCCCCGAGGTGGCTGGCAGCGGGGACT
GGCTGAGCGTGTGGCACCACGCGTGGCAGGAGTACCGGGACGAGAGCTTCATCCTGCAGTTCCTCAGCCCCAAGGTGATC
CGAGACTTCCGCCTTTTCCGGGTCCACGACGACGCCGACGACCCGGAGCTGTTGGTGGATGCCATCCACGACGACGCCGG
GTATCGGGCGGTGCGGCGCTCCTTGGCGCAGCGACACGATGTGGCCCGGCTGGAACCGGATATCCAGGTGGTGGACGTGG
ATCTGGCCGGTGATCGCACCCTGGTGCTCGAACACCGGGTTACGGACGGGGTCACGCTGGACAAGGGCCAGGCGACGGCG
GTGTTGCGCCATCTAGCCAACCTCTGGGGATACGATGTCAAGCTTTACGAGGTCGATCCGGAGACCGAGCGGGTGATCAA
CGAGTTCCCCCAGGTGTCACCGGCGGACCCGGTCGCCTGA

Upstream 100 bases:

>100_bases
CGTGGCGACATCTTCCCGGTCTTCCGGGATCTCTTTACGCCGGCTGAGCTGAAGGCCTGAGCGCTGAGCCCTGAATCCTC
GAGCGACGGAGGGGACCCCG

Downstream 100 bases:

>100_bases
GGTCAGCGGCGCAGGCAATTGGGGCGGCCCTTGCAGGGTGGTATGCTCAGAGCGACGCTATCGACTGTTTAGGAGTGACT
CATGCGGCGAACCGTACTGA

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MAPNAAVQQQPLFTGLDWDYRDVMRVYDAVEQIAQDELKLDIYPNQIEVISSEQMLDAYASMGMPLFYRHWSFGKHFARD
EMLYRKGYTGLAYEIVINSKPCISYIMEENTLTMQTLVVAHAAFGHNHFFKNNRLFREWTDAEGILDYLDFAKGYIAECE
ERYGVEAVERVLDAAHALMSQGVHRYPKPQTRSLREERDREIERIRYEEQTYNDLWRTVPTDPDGERPGGADPVEMRMQR
LGLPEENLLYFLEKRAPRLEHWQREVLRIVRNVAQYFYPQKQTKVMNEGCATAVHYYIMNRLHENGQLTDGAFLEFLHSH
TSVVFQPEFDDPRYSGINPYALGFAILEDLRRMATDPTAEDRRWFPEVAGSGDWLSVWHHAWQEYRDESFILQFLSPKVI
RDFRLFRVHDDADDPELLVDAIHDDAGYRAVRRSLAQRHDVARLEPDIQVVDVDLAGDRTLVLEHRVTDGVTLDKGQATA
VLRHLANLWGYDVKLYEVDPETERVINEFPQVSPADPVA

Sequences:

>Translated_519_residues
MAPNAAVQQQPLFTGLDWDYRDVMRVYDAVEQIAQDELKLDIYPNQIEVISSEQMLDAYASMGMPLFYRHWSFGKHFARD
EMLYRKGYTGLAYEIVINSKPCISYIMEENTLTMQTLVVAHAAFGHNHFFKNNRLFREWTDAEGILDYLDFAKGYIAECE
ERYGVEAVERVLDAAHALMSQGVHRYPKPQTRSLREERDREIERIRYEEQTYNDLWRTVPTDPDGERPGGADPVEMRMQR
LGLPEENLLYFLEKRAPRLEHWQREVLRIVRNVAQYFYPQKQTKVMNEGCATAVHYYIMNRLHENGQLTDGAFLEFLHSH
TSVVFQPEFDDPRYSGINPYALGFAILEDLRRMATDPTAEDRRWFPEVAGSGDWLSVWHHAWQEYRDESFILQFLSPKVI
RDFRLFRVHDDADDPELLVDAIHDDAGYRAVRRSLAQRHDVARLEPDIQVVDVDLAGDRTLVLEHRVTDGVTLDKGQATA
VLRHLANLWGYDVKLYEVDPETERVINEFPQVSPADPVA
>Mature_518_residues
APNAAVQQQPLFTGLDWDYRDVMRVYDAVEQIAQDELKLDIYPNQIEVISSEQMLDAYASMGMPLFYRHWSFGKHFARDE
MLYRKGYTGLAYEIVINSKPCISYIMEENTLTMQTLVVAHAAFGHNHFFKNNRLFREWTDAEGILDYLDFAKGYIAECEE
RYGVEAVERVLDAAHALMSQGVHRYPKPQTRSLREERDREIERIRYEEQTYNDLWRTVPTDPDGERPGGADPVEMRMQRL
GLPEENLLYFLEKRAPRLEHWQREVLRIVRNVAQYFYPQKQTKVMNEGCATAVHYYIMNRLHENGQLTDGAFLEFLHSHT
SVVFQPEFDDPRYSGINPYALGFAILEDLRRMATDPTAEDRRWFPEVAGSGDWLSVWHHAWQEYRDESFILQFLSPKVIR
DFRLFRVHDDADDPELLVDAIHDDAGYRAVRRSLAQRHDVARLEPDIQVVDVDLAGDRTLVLEHRVTDGVTLDKGQATAV
LRHLANLWGYDVKLYEVDPETERVINEFPQVSPADPVA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=487, Percent_Identity=56.0574948665298, Blast_Score=548, Evalue=1e-157,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60511; Mature: 60380

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPNAAVQQQPLFTGLDWDYRDVMRVYDAVEQIAQDELKLDIYPNQIEVISSEQMLDAYA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCEEEECHHHHHHHHH
SMGMPLFYRHWSFGKHFARDEMLYRKGYTGLAYEIVINSKPCISYIMEENTLTMQTLVVA
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCHHHHHHHHH
HAAFGHNHFFKNNRLFREWTDAEGILDYLDFAKGYIAECEERYGVEAVERVLDAAHALMS
HHHHCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QGVHRYPKPQTRSLREERDREIERIRYEEQTYNDLWRTVPTDPDGERPGGADPVEMRMQR
CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
LGLPEENLLYFLEKRAPRLEHWQREVLRIVRNVAQYFYPQKQTKVMNEGCATAVHYYIMN
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RLHENGQLTDGAFLEFLHSHTSVVFQPEFDDPRYSGINPYALGFAILEDLRRMATDPTAE
HHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
DRRWFPEVAGSGDWLSVWHHAWQEYRDESFILQFLSPKVIRDFRLFRVHDDADDPELLVD
HHHHCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHEEEEECCCCCHHHHHH
AIHDDAGYRAVRRSLAQRHDVARLEPDIQVVDVDLAGDRTLVLEHRVTDGVTLDKGQATA
HHHCCHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCEEEEEEEECCCCCEECCCHHHH
VLRHLANLWGYDVKLYEVDPETERVINEFPQVSPADPVA
HHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
APNAAVQQQPLFTGLDWDYRDVMRVYDAVEQIAQDELKLDIYPNQIEVISSEQMLDAYA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCEEEECHHHHHHHHH
SMGMPLFYRHWSFGKHFARDEMLYRKGYTGLAYEIVINSKPCISYIMEENTLTMQTLVVA
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCHHHHHHHHH
HAAFGHNHFFKNNRLFREWTDAEGILDYLDFAKGYIAECEERYGVEAVERVLDAAHALMS
HHHHCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QGVHRYPKPQTRSLREERDREIERIRYEEQTYNDLWRTVPTDPDGERPGGADPVEMRMQR
CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
LGLPEENLLYFLEKRAPRLEHWQREVLRIVRNVAQYFYPQKQTKVMNEGCATAVHYYIMN
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RLHENGQLTDGAFLEFLHSHTSVVFQPEFDDPRYSGINPYALGFAILEDLRRMATDPTAE
HHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH
DRRWFPEVAGSGDWLSVWHHAWQEYRDESFILQFLSPKVIRDFRLFRVHDDADDPELLVD
HHHHCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHEEEEECCCCCHHHHHH
AIHDDAGYRAVRRSLAQRHDVARLEPDIQVVDVDLAGDRTLVLEHRVTDGVTLDKGQATA
HHHCCHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCEEEEEEEECCCCCEECCCHHHH
VLRHLANLWGYDVKLYEVDPETERVINEFPQVSPADPVA
HHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]