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The map label for this gene is recA

Identifier: 121998434

GI number: 121998434

Start: 1808578

End: 1809642

Strand: Reverse

Name: recA

Synonym: Hhal_1655

Alternate gene names: 121998434

Gene position: 1809642-1808578 (Counterclockwise)

Preceding gene: 121998435

Following gene: 121998433

Centisome position: 67.56

GC content: 64.69

Gene sequence:

>1065_bases
ATGGACGACGATCGCAAAAAGGCGCTTGGCGCCGCGTTGGGACAGATCGAGAAGCAGTTTGGCAAGGGCGCCGTGATGCG
CATGGGCGATGCTCGTGCCGTACGTGGCGATGTCAAGAGCATCTCCACCGGGTCCCTGGCCCTGGACGTGGCGTTGGGTA
TTGGTGGCCTGCCGCGGGGACGGGTGGTGGAGATCTACGGGCCGGAGTCGTCCGGGAAGACGACCCTGACCCTGCACATC
ATCGCCGAGGCGCAGAAGGCGGGTGGGGCAGCGGCGTTCGTCGATGCCGAGCACGCCCTGGACCCGGATTACGCCGAGGC
GGTCGGGGTCGATATCAACGACCTGCTCGTCTCCCAGCCGGATACCGGCGAGCAGGCGCTGGAGATCGCCGACATGCTCG
TCCGCTCGGGCGGGCTCGATGTGGTGGTGGTCGACTCGGTGGCTGCCCTGACGCCCAAGGCCGAGATCGAGGGCGAGATG
GGTGATTCGCACGTTGGCCTGCAGGCGCGGCTGATGTCCCAGGCGCTGCGCAAGCTCACCGGCAGCATCCAGCGCTCCAA
TACCCTGGTGGTGTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTTGGCAGTCCGGAGACCACCACCGGCGGCA
ATGCGCTGAAGTTCTACTCCTCGGTGCGGATGGACATCCGCCGCCTCGGTGCCATCAAGAAGGGCGACGAGGTCCTCGGC
AACGAAACCCGGGTCAAGGTGGTCAAGAACAAGATGGCGCCGCCGTTCAAGCAGGCGGAGTTCGAGATCCTCTACGGAGA
GGGCATTTCCCGCGAGGGCGAGATCATCGATATGGGCGTGGCCCAGGGCTTTGTGGATAAATCCGGTGCCTGGTACAGCT
ACAACGGGGACCGGATCGGGCAGGGTAAGGACAATGCGCGGCAGTTCCTGCGCAACAACCCGCAGATCGCCGCGGATATC
GAGGCTCGCATCCGCGAGAAGGTCTTGGGTACCGCCTTGCCGGAAGCCGAACCGACCGAGGATGCCGCCTCCGACACCGA
GCAGAAGTCCGGCAAGGGGTCATGA

Upstream 100 bases:

>100_bases
CGCGAGCTTGGCGGCGGGCCGGTGGCAGGGACGCAGACCGGGTCGAAAAGGCGCCGGAGCCCGTCATTAGAGGGCAATCA
TGCGACGAGGTGGAACCGCA

Downstream 100 bases:

>100_bases
GCGAGGCCGGGGCGGCATCCGAGGCGGTACGTGATGCCGCCCTGCGTTTGTTGGCCCGGCGCGAGCACACGCGGCGTGAG
CTGGCTCAGAAGCTGGCCCG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MDDDRKKALGAALGQIEKQFGKGAVMRMGDARAVRGDVKSISTGSLALDVALGIGGLPRGRVVEIYGPESSGKTTLTLHI
IAEAQKAGGAAAFVDAEHALDPDYAEAVGVDINDLLVSQPDTGEQALEIADMLVRSGGLDVVVVDSVAALTPKAEIEGEM
GDSHVGLQARLMSQALRKLTGSIQRSNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRMDIRRLGAIKKGDEVLG
NETRVKVVKNKMAPPFKQAEFEILYGEGISREGEIIDMGVAQGFVDKSGAWYSYNGDRIGQGKDNARQFLRNNPQIAADI
EARIREKVLGTALPEAEPTEDAASDTEQKSGKGS

Sequences:

>Translated_354_residues
MDDDRKKALGAALGQIEKQFGKGAVMRMGDARAVRGDVKSISTGSLALDVALGIGGLPRGRVVEIYGPESSGKTTLTLHI
IAEAQKAGGAAAFVDAEHALDPDYAEAVGVDINDLLVSQPDTGEQALEIADMLVRSGGLDVVVVDSVAALTPKAEIEGEM
GDSHVGLQARLMSQALRKLTGSIQRSNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRMDIRRLGAIKKGDEVLG
NETRVKVVKNKMAPPFKQAEFEILYGEGISREGEIIDMGVAQGFVDKSGAWYSYNGDRIGQGKDNARQFLRNNPQIAADI
EARIREKVLGTALPEAEPTEDAASDTEQKSGKGS
>Mature_354_residues
MDDDRKKALGAALGQIEKQFGKGAVMRMGDARAVRGDVKSISTGSLALDVALGIGGLPRGRVVEIYGPESSGKTTLTLHI
IAEAQKAGGAAAFVDAEHALDPDYAEAVGVDINDLLVSQPDTGEQALEIADMLVRSGGLDVVVVDSVAALTPKAEIEGEM
GDSHVGLQARLMSQALRKLTGSIQRSNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRMDIRRLGAIKKGDEVLG
NETRVKVVKNKMAPPFKQAEFEILYGEGISREGEIIDMGVAQGFVDKSGAWYSYNGDRIGQGKDNARQFLRNNPQIAADI
EARIREKVLGTALPEAEPTEDAASDTEQKSGKGS

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=338, Percent_Identity=68.3431952662722, Blast_Score=494, Evalue=1e-141,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_HALHL (A1WXK7)

Other databases:

- EMBL:   CP000544
- RefSeq:   YP_001003221.1
- ProteinModelPortal:   A1WXK7
- SMR:   A1WXK7
- STRING:   A1WXK7
- GeneID:   4709839
- GenomeReviews:   CP000544_GR
- KEGG:   hha:Hhal_1655
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   AISKSRA
- PhylomeDB:   A1WXK7
- ProtClustDB:   PRK09354
- BioCyc:   HHAL349124:HHAL_1655-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37646; Mature: 37646

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDDRKKALGAALGQIEKQFGKGAVMRMGDARAVRGDVKSISTGSLALDVALGIGGLPRG
CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCHHCCCCCCEEEEEEECCCCCCCC
RVVEIYGPESSGKTTLTLHIIAEAQKAGGAAAFVDAEHALDPDYAEAVGVDINDLLVSQP
CEEEEECCCCCCCEEEEEEEEEEHHHCCCEEEEEEHHHCCCCCHHHHHCCCHHHHEECCC
DTGEQALEIADMLVRSGGLDVVVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLT
CCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GSIQRSNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRMDIRRLGAIKKGDEVLG
CCHHCCCEEEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHC
NETRVKVVKNKMAPPFKQAEFEILYGEGISREGEIIDMGVAQGFVDKSGAWYSYNGDRIG
CCHHEEEEHHHCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHCCCCCCCCEEEECCCCCC
QGKDNARQFLRNNPQIAADIEARIREKVLGTALPEAEPTEDAASDTEQKSGKGS
CCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCC
>Mature Secondary Structure
MDDDRKKALGAALGQIEKQFGKGAVMRMGDARAVRGDVKSISTGSLALDVALGIGGLPRG
CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCHHCCCCCCEEEEEEECCCCCCCC
RVVEIYGPESSGKTTLTLHIIAEAQKAGGAAAFVDAEHALDPDYAEAVGVDINDLLVSQP
CEEEEECCCCCCCEEEEEEEEEEHHHCCCEEEEEEHHHCCCCCHHHHHCCCHHHHEECCC
DTGEQALEIADMLVRSGGLDVVVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLT
CCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
GSIQRSNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRMDIRRLGAIKKGDEVLG
CCHHCCCEEEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHC
NETRVKVVKNKMAPPFKQAEFEILYGEGISREGEIIDMGVAQGFVDKSGAWYSYNGDRIG
CCHHEEEEHHHCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHCCCCCCCCEEEECCCCCC
QGKDNARQFLRNNPQIAADIEARIREKVLGTALPEAEPTEDAASDTEQKSGKGS
CCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA