| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is chlL
Identifier: 121998413
GI number: 121998413
Start: 1781582
End: 1782487
Strand: Reverse
Name: chlL
Synonym: Hhal_1634
Alternate gene names: 121998413
Gene position: 1782487-1781582 (Counterclockwise)
Preceding gene: 121998414
Following gene: 121998412
Centisome position: 66.55
GC content: 63.13
Gene sequence:
>906_bases ATGAGCAATGGCTCGGTGCCGGTGTCCGGGATCGGAGGCCGAGGCGATGGCGAGGGAAGCTCGCAGGTCCACATGGAATC CACCGGCGGTATGGACCGGGCCAAGGTCTTTGCCGTCTATGGCAAGGGCGGTATCGGCAAGAGCACGACCTCGTCGAACC TTGCCGTGGCCTTTAGCCAGCTGGGCAAGCGAGTGCTGCAGATCGGCTGTGACCCGAAGCACGACTCGACCTTCACCCTG ACCAAACGCCTGGTGCCGACCGTCATCGACAGCCTCGAGGAGGTGGACTTCCACATGGAGGAGCTCCGCCCCGAGGATTA CGTGTACGAAGGCTACAACGGCGTCCTCTGTGTCGAGGCGGGCGGACCGCCGGCCGGAACCGGCTGCGGCGGATACGTGG TGGGACAGACGGTCAAGCTGCTCAAGCAGCACCACCTCCTGGAAGAGACCGATGTGGTCATCTTCGACGTGCTCGGCGAC GTGGTCTGCGGTGGCTTTGCAGCGCCTCTGCAGCACGCTGATCAGGCCCTGATCGTCACCGCCAACGACTTCGACTCGAT CTTCGCCATGAACCGGATCGCCGGCGCGATCCAGGCGAAGGCGAAAAACTACAAGGTGCGCCTGGGTGGGGTGATCGCCA ACCGTAGCGAGCGCACGGACCAGATCGACCGGATCAACGAGCGGATCGGTCTGCGCACGCTGGCGCACGTGCCCAATTAT GATGTCGTGCGTCGCAGTCGGCTCCACAAGTCAACTCTGTTCGAACTCGAGGAGCAGTCCGAGGAGCTTGAGCGCGTGCG TGACGAGTACCTCAGCCTGGCGGCCGCGCTCTGGAACGGTGTCGATCCGCTAAGCCCCTCACCGCTGAAAGATCGTGAGG TCTTCGATCTGCTGGGGTTTGATTGA
Upstream 100 bases:
>100_bases ACTACTGGAATCCCGATGAGGAGACGCTCGAGGCGCTGCGGCGTGCCGGGGACGAGCTCGAGGATTACTACGAGGGTGTC AACGAGGAGGAGCAGGCCGC
Downstream 100 bases:
>100_bases TGCCGACGGAGTCCTACCAACAGCGCCGCAGCCGCGTGACCACCTATTTTGACCGCACGGCCACCAAGGCCTGGGAGCGG CTCACCTCGGATGCCCCGGT
Product: protochlorophyllide reductase iron-sulfur ATP-binding protein
Products: NA
Alternate protein names: DPOR subunit L; LI-POR subunit L
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSNGSVPVSGIGGRGDGEGSSQVHMESTGGMDRAKVFAVYGKGGIGKSTTSSNLAVAFSQLGKRVLQIGCDPKHDSTFTL TKRLVPTVIDSLEEVDFHMEELRPEDYVYEGYNGVLCVEAGGPPAGTGCGGYVVGQTVKLLKQHHLLEETDVVIFDVLGD VVCGGFAAPLQHADQALIVTANDFDSIFAMNRIAGAIQAKAKNYKVRLGGVIANRSERTDQIDRINERIGLRTLAHVPNY DVVRRSRLHKSTLFELEEQSEELERVRDEYLSLAAALWNGVDPLSPSPLKDREVFDLLGFD
Sequences:
>Translated_301_residues MSNGSVPVSGIGGRGDGEGSSQVHMESTGGMDRAKVFAVYGKGGIGKSTTSSNLAVAFSQLGKRVLQIGCDPKHDSTFTL TKRLVPTVIDSLEEVDFHMEELRPEDYVYEGYNGVLCVEAGGPPAGTGCGGYVVGQTVKLLKQHHLLEETDVVIFDVLGD VVCGGFAAPLQHADQALIVTANDFDSIFAMNRIAGAIQAKAKNYKVRLGGVIANRSERTDQIDRINERIGLRTLAHVPNY DVVRRSRLHKSTLFELEEQSEELERVRDEYLSLAAALWNGVDPLSPSPLKDREVFDLLGFD >Mature_300_residues SNGSVPVSGIGGRGDGEGSSQVHMESTGGMDRAKVFAVYGKGGIGKSTTSSNLAVAFSQLGKRVLQIGCDPKHDSTFTLT KRLVPTVIDSLEEVDFHMEELRPEDYVYEGYNGVLCVEAGGPPAGTGCGGYVVGQTVKLLKQHHLLEETDVVIFDVLGDV VCGGFAAPLQHADQALIVTANDFDSIFAMNRIAGAIQAKAKNYKVRLGGVIANRSERTDQIDRINERIGLRTLAHVPNYD VVRRSRLHKSTLFELEEQSEELERVRDEYLSLAAALWNGVDPLSPSPLKDREVFDLLGFD
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BCHL_HALHL (A1WXI6)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001003200.1 - ProteinModelPortal: A1WXI6 - SMR: A1WXI6 - STRING: A1WXI6 - GeneID: 4709612 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_1634 - eggNOG: COG1348 - HOGENOM: HBG488165 - OMA: IPTIIDT - ProtClustDB: PRK13185 - BioCyc: HHAL349124:HHAL_1634-MONOMER - HAMAP: MF_00355 - InterPro: IPR000392 - InterPro: IPR005971 - PIRSF: PIRSF000363 - PRINTS: PR00091 - TIGRFAMs: TIGR01281
Pfam domain/function: PF00142 Fer4_NifH
EC number: 1.18.-.-
Molecular weight: Translated: 32650; Mature: 32519
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00746 NIFH_FRXC_1; PS00692 NIFH_FRXC_2; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGSVPVSGIGGRGDGEGSSQVHMESTGGMDRAKVFAVYGKGGIGKSTTSSNLAVAFSQ CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHH LGKRVLQIGCDPKHDSTFTLTKRLVPTVIDSLEEVDFHMEELRPEDYVYEGYNGVLCVEA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEC GGPPAGTGCGGYVVGQTVKLLKQHHLLEETDVVIFDVLGDVVCGGFAAPLQHADQALIVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCEEEEE ANDFDSIFAMNRIAGAIQAKAKNYKVRLGGVIANRSERTDQIDRINERIGLRTLAHVPNY ECCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCH DVVRRSRLHKSTLFELEEQSEELERVRDEYLSLAAALWNGVDPLSPSPLKDREVFDLLGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC D C >Mature Secondary Structure SNGSVPVSGIGGRGDGEGSSQVHMESTGGMDRAKVFAVYGKGGIGKSTTSSNLAVAFSQ CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHH LGKRVLQIGCDPKHDSTFTLTKRLVPTVIDSLEEVDFHMEELRPEDYVYEGYNGVLCVEA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEC GGPPAGTGCGGYVVGQTVKLLKQHHLLEETDVVIFDVLGDVVCGGFAAPLQHADQALIVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCEEEEE ANDFDSIFAMNRIAGAIQAKAKNYKVRLGGVIANRSERTDQIDRINERIGLRTLAHVPNY ECCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCH DVVRRSRLHKSTLFELEEQSEELERVRDEYLSLAAALWNGVDPLSPSPLKDREVFDLLGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA