| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998407
Identifier: 121998407
GI number: 121998407
Start: 1776519
End: 1777334
Strand: Reverse
Name: 121998407
Synonym: Hhal_1628
Alternate gene names: NA
Gene position: 1777334-1776519 (Counterclockwise)
Preceding gene: 121998408
Following gene: 121998406
Centisome position: 66.36
GC content: 64.09
Gene sequence:
>816_bases ATGGTCGAGTACCTTCTTCCGGCGCTTTTCGCGCTGTTCCTCTGGTGGTTCAGCACGGGCGTGGTGATCTACCTGGACAA CCTCCCGGTGCACACGTTCCGCTGGAGCATGCTCGGCGGCACAGTCGGCCTGGCGCTCGGCTTGTACGGGGTGGCGGCGA CCAGCACGGACACCTCCGTAGGAGGCGCCTACCTCGCCTTTACCAGCGCACTCCTCGTCTGGGCCTGGGTCGAGCTGAGC TACTATACCAACTACCTGACCGGACCTAGGCAGGTTCGGTGCCCGCAGGACTGCTCAGGTTGGCGTCACTTCGGCCACGC CCTGCAAAGCAACGTCTACCACGAGGTGGCAATTGTCGTGCTCGGCGTGGTCCTGGCGATCCTGACCTGGGGAGACGGCA ATCTGGTGGCGCTGTGGACATTCCTGGTGCTGGCCTGGATGCACGAGAGCGCGCGGGTCAACGTGTTCCTGGGGGTGCGT AACCTCAACGAGGAATTCGTCCCGGATCATATGCATTTCCTCCGCGGCTTCATGCGCCGGCGTCCGATGAATCTCTTCTT CCCGTTCTCGGTGAGCATCTCCACGGTGGCGCTGGTGCTCTTGGTGCAGGCGGCCATGGCGCCGGGGATCGACGCGTTCA CCGCGGTGGGATTGACCCTCGTTGCGACGCTGATGGCGCTGGCTATCCTCGAGCACTGGTTCCTGGTCATCCCGATGCCC ACGGCGTTCCTGTGGCAGTGGGGGCTCAAAGCACGCAATCGCGGTGATCAAGGGGTGGCGACGAAGACCGCCGACGCGGA CGCGTCCTCCTCCTGA
Upstream 100 bases:
>100_bases GCCAGGGCGTGGATCTCGCGGCGTTCGGCGAGGACAACGCCGGCGCCTTCGCCCGGTTCCTGGAGACTGAGGACGACGAG AACAGCGTCGAGGGGCCGTA
Downstream 100 bases:
>100_bases GGGCAAGGGCGAATCATGCTCGGGGGTCGAGGCACGGCGTGGCGGGACTTGGGACTAGCAGGGATCGCCCTGGCGGCGAT TGGCTTGGCCCTGTACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF274 [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSVGGAYLAFTSALLVWAWVELS YYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVVLGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVR NLNEEFVPDHMHFLRGFMRRRPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP TAFLWQWGLKARNRGDQGVATKTADADASSS
Sequences:
>Translated_271_residues MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSVGGAYLAFTSALLVWAWVELS YYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVVLGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVR NLNEEFVPDHMHFLRGFMRRRPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP TAFLWQWGLKARNRGDQGVATKTADADASSS >Mature_271_residues MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSVGGAYLAFTSALLVWAWVELS YYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVVLGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVR NLNEEFVPDHMHFLRGFMRRRPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP TAFLWQWGLKARNRGDQGVATKTADADASSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017496 [H]
Pfam domain/function: PF12291 DUF3623 [H]
EC number: NA
Molecular weight: Translated: 30017; Mature: 30017
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSV CHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GGAYLAFTSALLVWAWVELSYYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVRNLNEEFVPDHMHFLRGFMRR HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHCCHHHHHHHHHHHHC RPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP CCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC TAFLWQWGLKARNRGDQGVATKTADADASSS HHHHHHHHHHHCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure MVEYLLPALFALFLWWFSTGVVIYLDNLPVHTFRWSMLGGTVGLALGLYGVAATSTDTSV CHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GGAYLAFTSALLVWAWVELSYYTNYLTGPRQVRCPQDCSGWRHFGHALQSNVYHEVAIVV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGVVLAILTWGDGNLVALWTFLVLAWMHESARVNVFLGVRNLNEEFVPDHMHFLRGFMRR HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHCCHHHHHHHHHHHHC RPMNLFFPFSVSISTVALVLLVQAAMAPGIDAFTAVGLTLVATLMALAILEHWFLVIPMP CCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC TAFLWQWGLKARNRGDQGVATKTADADASSS HHHHHHHHHHHCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA