The gene/protein map for NC_008789 is currently unavailable.
Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998323

Identifier: 121998323

GI number: 121998323

Start: 1675936

End: 1676283

Strand: Reverse

Name: 121998323

Synonym: Hhal_1541

Alternate gene names: NA

Gene position: 1676283-1675936 (Counterclockwise)

Preceding gene: 121998324

Following gene: 121998322

Centisome position: 62.58

GC content: 64.94

Gene sequence:

>348_bases
ATGAGCGACTCTGAACCCCGTATACAGGAGTCGCCTCAGCCTGGGGAGAGGAGTTCGCGGCGCTGGTCATTGCGCTCCAA
CGATCTCGCTTGGCGCCTTGTCGGGGCGTATGGTTTCGTCTACCACCGCGGCTCAGGCTCCACCTACGCCATGCCCCGCC
TCTCGACAGAGATCCTGGCCCGGATCAGCGAGCGTACCTCGGTGACGGAGCGGGAGTTGCTTAAGGCGGTGGCTGAGGAC
GATGGTGGGCTCGTGGAGGCGGGCACGCAGCCAGGTTCTCGGGAGGATCTTCTGGGCTGGGCCCTGCAGCCGCTCATGGA
TGCGCGTCTAATCCGGGAGTGCACGTGA

Upstream 100 bases:

>100_bases
TTACGAAACGAGCACCGGTGAGGTGCCCTTGGGGCCCGAGGAGGTCGCCCTGTTTCTCGAGAATATAACGGCCGATCCTT
TTTTCCTTCATGAGGCTTAA

Downstream 100 bases:

>100_bases
CGACGATCGCTGGGCTGGGCTACAGCAGCGTCGTGGATCGTCTATCCAGCGGGGAGCTTGCCGTTCAGACCGGTCCCTTC
CGCTTTGCCCTCCGCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSDSEPRIQESPQPGERSSRRWSLRSNDLAWRLVGAYGFVYHRGSGSTYAMPRLSTEILARISERTSVTERELLKAVAED
DGGLVEAGTQPGSREDLLGWALQPLMDARLIRECT

Sequences:

>Translated_115_residues
MSDSEPRIQESPQPGERSSRRWSLRSNDLAWRLVGAYGFVYHRGSGSTYAMPRLSTEILARISERTSVTERELLKAVAED
DGGLVEAGTQPGSREDLLGWALQPLMDARLIRECT
>Mature_114_residues
SDSEPRIQESPQPGERSSRRWSLRSNDLAWRLVGAYGFVYHRGSGSTYAMPRLSTEILARISERTSVTERELLKAVAEDD
GGLVEAGTQPGSREDLLGWALQPLMDARLIRECT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12851; Mature: 12719

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSEPRIQESPQPGERSSRRWSLRSNDLAWRLVGAYGFVYHRGSGSTYAMPRLSTEILA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHCCHHEEEEECCCCCEEECCHHHHHHHH
RISERTSVTERELLKAVAEDDGGLVEAGTQPGSREDLLGWALQPLMDARLIRECT
HHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDSEPRIQESPQPGERSSRRWSLRSNDLAWRLVGAYGFVYHRGSGSTYAMPRLSTEILA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHCCHHEEEEECCCCCEEECCHHHHHHHH
RISERTSVTERELLKAVAEDDGGLVEAGTQPGSREDLLGWALQPLMDARLIRECT
HHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA