| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is asnB [H]
Identifier: 121998294
GI number: 121998294
Start: 1637088
End: 1639001
Strand: Reverse
Name: asnB [H]
Synonym: Hhal_1512
Alternate gene names: 121998294
Gene position: 1639001-1637088 (Counterclockwise)
Preceding gene: 121998295
Following gene: 121998293
Centisome position: 61.19
GC content: 66.67
Gene sequence:
>1914_bases GTGTGCGGGTTAGTCGGAATCCTGGATCACGCCCTGGAAGGCGGGCGCGCCGGCGACGAGGCGCTTTTGCGGCGCATGAC CGAGAGCCTGGCCCACCGGGGACCGGACGATTCGAGTATCCATCAGGAGGCCGGGGTCGGGCTCGGCCACCGTCGCTTGT CAATCATCGATCGCGCGGGGGGGCAGCAGCCGCTTGCCAATGAAGATGGCCGGGTGATCACCGTCTTCAACGGCGAGATC TACAACCATGCCGAGCTGCGGTCGACACTGGAGCAGCGCGGGCACGACTTCGCCACGCGCTGTGATACCGAGGTCATTGT GCACGCCTGGGAGGAGTGGGGCGAGCGTTGCGTCGAGCACTTCCGCGGGATGTTCAGCCTGGCGGTCTGGGATCGCAATG AGCAGGCGTTATTCCTGGCCCGCGATCGGCTCGGGATCAAGCCCCTGTGCTACGCCGAACTCCCCGACGGACGGGTGCTG TTCGCGTCCGAGATCAAGGCCCTGCTGGCCTGCGCCGAGGTGCCGAGAGACCTCGATCCGAGGGCGATCGAGGATTACTT CGCCTACGGTTATGTGCCGGATCCGCGGAGCATCTTTGCGGCCGTACGCAAGCTGCCGCCGGGGCATACGTTATTGCTAC GCCGCGGTGAACCGATGGGGCCCCCGCGACAGTATTGGGACGCTACGTTCGATAGCAGCTCAGATCGCTCGTTGTCGGCG GAGCAGGCCGGCGAGGCGTTGGTCGCGCAGCTACGCGAGGCGGTGGACATCCGTCTTGAGGCCGAGGTCCCTCTGGGCGC TTTCCTCTCCGGCGGGGTCGACTCCAGTGTCGTGGTGGCGTTGATGAGCGAACTCAGTGACCGTCCGGTGGATGCGTGCT CCATTGCCTTCCGCGATCCGCATTACGACGAGGCGGAGCACGCCGGGAAGGTGGCCGGGCACCTGGGCCTCAACCACCAC ATCCACAAGGTGGATTCGGAGCGTTTCGACCTGATCGACGAGTTGGCGCTGCTCTTCGACGAGCCCTTCGCCGACCCGTC GGCTCTTCCTACCTACGAGGTCAGCCGGATCGCGCGGCAGCACGTTACGGTGGCGCTATCCGGGGACGGGGGCGATGAGG TGCTGGCGGGGTACCGACGCTACCGCGGTTATCAGCGGGAGGCCCGGCTGCGGGGGCGGCTACCGGATGGCCTTCGACGA GGTCTGTTCGGGTCGCTGGCCCGCTGGTACCCGAAGGCCGACTGGGCACCTAAGTACCTGCGTGGCAAGGCGACTTTCCA GGCGCTGGCGGCGGATCCGGTGGCCGGGTATCTGCGCAGCGTCGCGGTGGTCGATGACGATCAGCGCGCCCGGCTGTTCT CGCAGCGGTTTCAGCGCGAACTGCAGGGGTACCACGCCGCCGAGGTGCTGCGTGGCCACGCCGCCGAGGCACCGACCCAC GACCCGCTCGCCTTTGTGCAGTACCTGGATCTCAAAACCTGGTTGCCGGGCGACATCCTGACCAAGGTGGATCGGGCAAG CATGGCCCACGGGCTGGAGGTGCGGGTGCCGCTGCTCGATCACCGGTTCATGGAGTGGGCGGGGCGGTTGCCTACGGATC TCAAGGTCCGCAATCAGCAGGGCAAGTGGCTCCTCAAGCGGGCCTTCGAGGATCGCCTGCCCCACGATGTCCTCTACCGC ACCAAGCAGGGGTTCAATATGCCCATCGCGGAGTGGTTTCGCGGACCGCTGCGCCAGCGGCTCCGCGAAGCCGTGCTCGG CAAACGGCTGATGGACAGCGGTTACTTCGATGCGAGCCGGTTGCGCACCCTGGTCGATGAACACCAGTCCGGGCGAAGCA ATCACGCCCGTCCGCTGTGGGCCCTGCTGATGCTGGAGTCCTTCCTGCGCCGCTGTGTGGAGGGGGCGCGGTGA
Upstream 100 bases:
>100_bases CTCGGTCGAGGCCATGGTCGGGGCTTACGAAAGTCTTTATCGCGAGCTATTGGCGCCACCGGCGCGGAGCGGCTCCGTGG CAAGGAAGGGATAACTGCCA
Downstream 100 bases:
>100_bases CCCCCTGGCTGGTCCGTGGGCTCCTGTTGCCCGCCCATGAGCGGCTGCGTGGCCGGGCAACCCTCGCCGAACTGGCGGCC CTGCGTCGGGGCGAGCAGCA
Product: asparagine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAGGQQPLANEDGRVITVFNGEI YNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEHFRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVL FASEIKALLACAEVPRDLDPRAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDPHYDEAEHAGKVAGHLGLNHH IHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQHVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRR GLFGSLARWYPKADWAPKYLRGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQGKWLLKRAFEDRLPHDVLYR TKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASRLRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR
Sequences:
>Translated_637_residues MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAGGQQPLANEDGRVITVFNGEI YNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEHFRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVL FASEIKALLACAEVPRDLDPRAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDPHYDEAEHAGKVAGHLGLNHH IHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQHVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRR GLFGSLARWYPKADWAPKYLRGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQGKWLLKRAFEDRLPHDVLYR TKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASRLRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR >Mature_637_residues MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAGGQQPLANEDGRVITVFNGEI YNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEHFRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVL FASEIKALLACAEVPRDLDPRAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDPHYDEAEHAGKVAGHLGLNHH IHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQHVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRR GLFGSLARWYPKADWAPKYLRGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQGKWLLKRAFEDRLPHDVLYR TKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASRLRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR
Specific function: Main asparagine synthetase in vegetative cells [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI168229248, Length=378, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI168229252, Length=378, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI168229250, Length=378, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI296010848, Length=378, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=4e-23, Organism=Escherichia coli, GI1786889, Length=396, Percent_Identity=31.3131313131313, Blast_Score=158, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71993933, Length=391, Percent_Identity=28.9002557544757, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25147557, Length=391, Percent_Identity=28.9002557544757, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI25147560, Length=355, Percent_Identity=28.169014084507, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17560178, Length=395, Percent_Identity=27.0886075949367, Blast_Score=103, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6321563, Length=417, Percent_Identity=26.8585131894484, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6325403, Length=414, Percent_Identity=26.5700483091787, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI45553209, Length=409, Percent_Identity=26.8948655256724, Blast_Score=137, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 71729; Mature: 71729
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAG CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHCC GQQPLANEDGRVITVFNGEIYNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEH CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHH FRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVLFASEIKALLACAEVPRDLDP HHHHHEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCC RAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA HHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCH EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDP HHHHHHHHHHHHHHHCEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHEEEECCC HYDEAEHAGKVAGHLGLNHHIHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQ CCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH HVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRRGLFGSLARWYPKADWAPKYL HEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH RGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQ CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEECCCC GKWLLKRAFEDRLPHDVLYRTKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASR CHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MCGLVGILDHALEGGRAGDEALLRRMTESLAHRGPDDSSIHQEAGVGLGHRRLSIIDRAG CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHCC GQQPLANEDGRVITVFNGEIYNHAELRSTLEQRGHDFATRCDTEVIVHAWEEWGERCVEH CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHH FRGMFSLAVWDRNEQALFLARDRLGIKPLCYAELPDGRVLFASEIKALLACAEVPRDLDP HHHHHEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCC RAIEDYFAYGYVPDPRSIFAAVRKLPPGHTLLLRRGEPMGPPRQYWDATFDSSSDRSLSA HHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCH EQAGEALVAQLREAVDIRLEAEVPLGAFLSGGVDSSVVVALMSELSDRPVDACSIAFRDP HHHHHHHHHHHHHHHCEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHEEEECCC HYDEAEHAGKVAGHLGLNHHIHKVDSERFDLIDELALLFDEPFADPSALPTYEVSRIARQ CCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH HVTVALSGDGGDEVLAGYRRYRGYQREARLRGRLPDGLRRGLFGSLARWYPKADWAPKYL HEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHH RGKATFQALAADPVAGYLRSVAVVDDDQRARLFSQRFQRELQGYHAAEVLRGHAAEAPTH HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC DPLAFVQYLDLKTWLPGDILTKVDRASMAHGLEVRVPLLDHRFMEWAGRLPTDLKVRNQQ CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEECCCC GKWLLKRAFEDRLPHDVLYRTKQGFNMPIAEWFRGPLRQRLREAVLGKRLMDSGYFDASR CHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LRTLVDEHQSGRSNHARPLWALLMLESFLRRCVEGAR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8755891; 10498721 [H]