Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998273

Identifier: 121998273

GI number: 121998273

Start: 1610345

End: 1611574

Strand: Reverse

Name: 121998273

Synonym: Hhal_1491

Alternate gene names: NA

Gene position: 1611574-1610345 (Counterclockwise)

Preceding gene: 121998274

Following gene: 121998270

Centisome position: 60.17

GC content: 61.54

Gene sequence:

>1230_bases
ATGAGTACTGAGAAGGACCCGAGCAAAGGCTATGTGGCGATCCTCGGTTGGAGCATCAACTGCATCGACGCCCTGGACCG
TTTCGATCGCCGCTACGTCATCGTCGCCCCGGAGTGGGCCGAGGAGTACGCCCGGGAGCACGATATCCCGTTTATTCCCT
GGGATTTCGAGCGGCTGAATGACCGCTCCATGGAGATTGCCGAACGCCTGCGTGACGAGGGGGTGGATGTTGCCATCCCG
CTGTTCGAGGAGACGGTGGAGTGGGCCGGGGCCATCAATGCGGTCCTCATGGGGGATCCGCGACTGCACGGGCAGGCCGT
GCTGTTCCGCGACAAAGCGTTGATGAAGCGCCGCGCGCAGCTCGGGGGCATTCGTGTCGGCATCTTCGAAGAGGCCCACG
ACAAGGACGACGTGATCCGCTTCCTCAAGCGGGTGAACCAGACCCTGCTCAAGCTGGACGGGGATCCTAACGACCCCATT
CACCTGAAGGCCTTCGACAAGGCAGGTTGCCTCGGGCACCGCGTCATCCGCACCCCGGATGAGGTGGATCTGATCCCTGA
AGAGGAGTTCCCGGTGCTCATGGAGAGCCACCTGGACGGCTGGGAGTTCGCCGTGGAGGCGTGGATCCACGATGGCAAGA
TCCGCTTCCTGAATATCTCCGAGTACGTCACGCTCGGCTACTCGGTCTTCGTCCCGGCCACGCCGGAGCTGGAAAGCTGG
CGGGAGCTGATCACCCGCGAGATCGAGAAACTGATCAAGACCTTCGATATCCGCTTCGGCTTCATCCACCCCGAGTACTT
CGTGACCAGTGACGGGACCATGTACTTCGGCGAGGTGGCTTACCGGCCGCCCGGTTTTAAGGTCTTTGAGCTGCTCGAGC
GTGCTTACGGCTTCAATGCCTATCAGGGTATGGTTCTGGCCTTCGATCCGAAAACCACCGAGGAAGAGATCACCGCCTTC
TTCCCGCGCGAGGTGGTCGGCGCCAAGGGCTATGCGGGCTGTTTCGGGGTCTATCCGCGGCGGCGGGTGGTCAGCCGTCT
GGAGATCCCGGAGGAGACTGAGCAGCACGAATACTTCGAGTACCACGAACTCACCCCGCCTCAGGAGGAGGTGGTCACCA
AACGGACCGCCTTCGGTACCCACTGGGGGCTTGTTTACTTCTTCGGAGACAATCCGCACCGGCTCCGGGATCTGCTCAAA
CACCAGGAGGAGCTGGACTACTACGTCTGA

Upstream 100 bases:

>100_bases
CTGCAGGGTAGCCCGTGATGTCATTGCGGATGTCAGCCCGCCTGCCTCCGGCTTTGCTCGACGGGCCCCTCGATCACCCG
CAATCGGAGCACCCCGCCGT

Downstream 100 bases:

>100_bases
TTGGCGCCGTGCGCGCTCCCGGGCGGGGCGCGCACGATGGTGGTGCGGTGTGCGCAGCCGGCCTATCGGCCGGACGGCCT
CAGTGGATCTCGCGCCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSTEKDPSKGYVAILGWSINCIDALDRFDRRYVIVAPEWAEEYAREHDIPFIPWDFERLNDRSMEIAERLRDEGVDVAIP
LFEETVEWAGAINAVLMGDPRLHGQAVLFRDKALMKRRAQLGGIRVGIFEEAHDKDDVIRFLKRVNQTLLKLDGDPNDPI
HLKAFDKAGCLGHRVIRTPDEVDLIPEEEFPVLMESHLDGWEFAVEAWIHDGKIRFLNISEYVTLGYSVFVPATPELESW
RELITREIEKLIKTFDIRFGFIHPEYFVTSDGTMYFGEVAYRPPGFKVFELLERAYGFNAYQGMVLAFDPKTTEEEITAF
FPREVVGAKGYAGCFGVYPRRRVVSRLEIPEETEQHEYFEYHELTPPQEEVVTKRTAFGTHWGLVYFFGDNPHRLRDLLK
HQEELDYYV

Sequences:

>Translated_409_residues
MSTEKDPSKGYVAILGWSINCIDALDRFDRRYVIVAPEWAEEYAREHDIPFIPWDFERLNDRSMEIAERLRDEGVDVAIP
LFEETVEWAGAINAVLMGDPRLHGQAVLFRDKALMKRRAQLGGIRVGIFEEAHDKDDVIRFLKRVNQTLLKLDGDPNDPI
HLKAFDKAGCLGHRVIRTPDEVDLIPEEEFPVLMESHLDGWEFAVEAWIHDGKIRFLNISEYVTLGYSVFVPATPELESW
RELITREIEKLIKTFDIRFGFIHPEYFVTSDGTMYFGEVAYRPPGFKVFELLERAYGFNAYQGMVLAFDPKTTEEEITAF
FPREVVGAKGYAGCFGVYPRRRVVSRLEIPEETEQHEYFEYHELTPPQEEVVTKRTAFGTHWGLVYFFGDNPHRLRDLLK
HQEELDYYV
>Mature_408_residues
STEKDPSKGYVAILGWSINCIDALDRFDRRYVIVAPEWAEEYAREHDIPFIPWDFERLNDRSMEIAERLRDEGVDVAIPL
FEETVEWAGAINAVLMGDPRLHGQAVLFRDKALMKRRAQLGGIRVGIFEEAHDKDDVIRFLKRVNQTLLKLDGDPNDPIH
LKAFDKAGCLGHRVIRTPDEVDLIPEEEFPVLMESHLDGWEFAVEAWIHDGKIRFLNISEYVTLGYSVFVPATPELESWR
ELITREIEKLIKTFDIRFGFIHPEYFVTSDGTMYFGEVAYRPPGFKVFELLERAYGFNAYQGMVLAFDPKTTEEEITAFF
PREVVGAKGYAGCFGVYPRRRVVSRLEIPEETEQHEYFEYHELTPPQEEVVTKRTAFGTHWGLVYFFGDNPHRLRDLLKH
QEELDYYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47597; Mature: 47465

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEKDPSKGYVAILGWSINCIDALDRFDRRYVIVAPEWAEEYAREHDIPFIPWDFERLN
CCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHCC
DRSMEIAERLRDEGVDVAIPLFEETVEWAGAINAVLMGDPRLHGQAVLFRDKALMKRRAQ
CCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCCCEEEEHHHHHHHHHHH
LGGIRVGIFEEAHDKDDVIRFLKRVNQTLLKLDGDPNDPIHLKAFDKAGCLGHRVIRTPD
HCCEEEEEECCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCEECCCC
EVDLIPEEEFPVLMESHLDGWEFAVEAWIHDGKIRFLNISEYVTLGYSVFVPATPELESW
CCCCCCCCCCCHHHHHCCCCHHHEEEEEEECCEEEEEEHHHHEEECEEEEECCCCCHHHH
RELITREIEKLIKTFDIRFGFIHPEYFVTSDGTMYFGEVAYRPPGFKVFELLERAYGFNA
HHHHHHHHHHHHHHHCCEEEEECCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCC
YQGMVLAFDPKTTEEEITAFFPREVVGAKGYAGCFGVYPRRRVVSRLEIPEETEQHEYFE
CCCEEEEECCCCCHHHHHHHCCHHHHCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCHHH
YHELTPPQEEVVTKRTAFGTHWGLVYFFGDNPHRLRDLLKHQEELDYYV
HHCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STEKDPSKGYVAILGWSINCIDALDRFDRRYVIVAPEWAEEYAREHDIPFIPWDFERLN
CCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHCC
DRSMEIAERLRDEGVDVAIPLFEETVEWAGAINAVLMGDPRLHGQAVLFRDKALMKRRAQ
CCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCCCEEEEHHHHHHHHHHH
LGGIRVGIFEEAHDKDDVIRFLKRVNQTLLKLDGDPNDPIHLKAFDKAGCLGHRVIRTPD
HCCEEEEEECCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCEECCCC
EVDLIPEEEFPVLMESHLDGWEFAVEAWIHDGKIRFLNISEYVTLGYSVFVPATPELESW
CCCCCCCCCCCHHHHHCCCCHHHEEEEEEECCEEEEEEHHHHEEECEEEEECCCCCHHHH
RELITREIEKLIKTFDIRFGFIHPEYFVTSDGTMYFGEVAYRPPGFKVFELLERAYGFNA
HHHHHHHHHHHHHHHCCEEEEECCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCC
YQGMVLAFDPKTTEEEITAFFPREVVGAKGYAGCFGVYPRRRVVSRLEIPEETEQHEYFE
CCCEEEEECCCCCHHHHHHHCCHHHHCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCHHH
YHELTPPQEEVVTKRTAFGTHWGLVYFFGDNPHRLRDLLKHQEELDYYV
HHCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA