Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998200

Identifier: 121998200

GI number: 121998200

Start: 1531658

End: 1532095

Strand: Reverse

Name: 121998200

Synonym: Hhal_1418

Alternate gene names: NA

Gene position: 1532095-1531658 (Counterclockwise)

Preceding gene: 121998201

Following gene: 121998199

Centisome position: 57.2

GC content: 64.61

Gene sequence:

>438_bases
ATGCGAGCTTTCAATAAGGTAGTGGCGGCGGCTGCACTGAGTGTCGCCGGCGTGGGCCTGGTCCAGGCCGATAGTCACGG
TCCGGATAAACTGTTCGTCAGCGTGACCTCCGAGGATGTGCAGACCCAGGGGTTTGCCATGATCCTGGCGACTCAGGGCA
TGCAGCAGGGTCAGGAGCCGCGTGTCCTGCTCTGTGGCCCCGGCGCCGAGATGGCCACGGAAGACTACGAGGCCGACGCC
CTGGACCCGGCGGGCGCCAATCCGCAGCAGATGATGCGCAGCCTGATCGGCGAGGGCGTTCAGGTGGATGTCTGTGCCAT
CTTCCTGCCGAACACCGACTACACCGAGGACGACCTGATCGAGGGCGTGGGTGTGGCGGAGGCGCCGGAGGTGGCCGAGT
ACATGGCTGATCCGAGTGTCCGCTACTTCTCCAACTGA

Upstream 100 bases:

>100_bases
CAGTAGCCGCCTGCGATTTGCATGGGTATGAATGCTTCGCTATGTTGCCAGCTGAGGTCGATCACCGGCCTCGTCCATGC
ACGCAAGGAGCCAAGCCAAG

Downstream 100 bases:

>100_bases
CGGAACGGCTGCCGGGCGGCACAGCGCCGATCGGCAGCCTCTGCGCTCCCGGACGGGTCGTGACGGGGGCGAGGCTGAGG
ATAGCCCGCTGATCCGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRAFNKVVAAAALSVAGVGLVQADSHGPDKLFVSVTSEDVQTQGFAMILATQGMQQGQEPRVLLCGPGAEMATEDYEADA
LDPAGANPQQMMRSLIGEGVQVDVCAIFLPNTDYTEDDLIEGVGVAEAPEVAEYMADPSVRYFSN

Sequences:

>Translated_145_residues
MRAFNKVVAAAALSVAGVGLVQADSHGPDKLFVSVTSEDVQTQGFAMILATQGMQQGQEPRVLLCGPGAEMATEDYEADA
LDPAGANPQQMMRSLIGEGVQVDVCAIFLPNTDYTEDDLIEGVGVAEAPEVAEYMADPSVRYFSN
>Mature_145_residues
MRAFNKVVAAAALSVAGVGLVQADSHGPDKLFVSVTSEDVQTQGFAMILATQGMQQGQEPRVLLCGPGAEMATEDYEADA
LDPAGANPQQMMRSLIGEGVQVDVCAIFLPNTDYTEDDLIEGVGVAEAPEVAEYMADPSVRYFSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15300; Mature: 15300

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFNKVVAAAALSVAGVGLVQADSHGPDKLFVSVTSEDVQTQGFAMILATQGMQQGQEP
CCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCHHCCCCC
RVLLCGPGAEMATEDYEADALDPAGANPQQMMRSLIGEGVQVDVCAIFLPNTDYTEDDLI
CEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHH
EGVGVAEAPEVAEYMADPSVRYFSN
HCCCCCCCHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRAFNKVVAAAALSVAGVGLVQADSHGPDKLFVSVTSEDVQTQGFAMILATQGMQQGQEP
CCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCHHCCCCC
RVLLCGPGAEMATEDYEADALDPAGANPQQMMRSLIGEGVQVDVCAIFLPNTDYTEDDLI
CEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHH
EGVGVAEAPEVAEYMADPSVRYFSN
HCCCCCCCHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA